Zootoca vivipara (common lizard): 118093208
Help
Entry
118093208 CDS
T07275
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118093208 (RAI1)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118093208 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
118093208
NCBI-ProteinID:
XP_034988029
LinkDB
All DBs
Position
LG11:5818548..6034747
Genome browser
AA seq
1988 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPASSQDSSRLENYRHQSQAGPHCERQRMVAKEYYGQQQQPPP
PPPQPPLPYQGYGENSTVEKYHRGNKQLRSQQLPGRPASFPNYAVQENSPYPARYSGEES
LQAWGSPQQQPPPPPQPLPGGVAKYEENLLKKTAASSSSRQYHEQAPQLPFRTHSLHLQQ
QQQQQQQQQQQPPTLTYPKLPRQKIQNDVASPMPFPQGAHFSQHSQSFPASSTYTSVQSG
SQAAHSYKSCNAPSAAPQHERTLGNVSSLPSGQRVQGLHGYQPNRISYDQQQQQQQQQQQ
QSMQGRHHAQEALHYQNLAKYQHYNQPGQSYCQADAPVRTPDQYYQTFSPSSSHSPARSV
GRSPSYSSTPSPLMPNLENFQYSQQSLSAGSFPASLADHSHFMPLLNPSPTDGASPDAQP
PANCKSMPKEKIPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSTGMPQKKGLKNPP
RTPEQLKGQHCSPEGNNYSAEQAGTPLSDPLSTPQSVHAETQDGDYLSGSEEQLERSFLY
CNQSRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHTSLPLESFTKFVTNER
DCPRLLLSALSQEELASEIIGLQDAINEKADKGWASPPAPNKDPDKSPFHLENHRTCLDS
IVKSPWSNQGDSNALAEPLKLDKALGGNNGKNFTEEVYNNSQVAFTTAETKNTLKTTSSV
GYNSKPNISAATSSSEATSFSCYSNATANSVGSENAMENFDWPDENLSDTWKELGSSLQG
SDISKSLFSGKLSETSEEKKTACCLSLCDAEQAPQQAEGFDQPQEASKGENLTYDEATRA
DSERWLEDTTRQSCSGGDFSELPMMSSPDLKESDLEPEEYSSLCELAASEQKSLTYDAFT
PKAAENAPALSLQDTPGSAEEMANAAEKENATPPSHLSDQSVILLGPAVGTETKVKSWFE
SSLHHLKPEEEEVVGSENAFPDDKAETLAASLVTNQASLEQVPITSEPTSRGKSLRSKKV
HCRLSGGEEPVQPMSSPCTGNQAAGMVASKCPGPNNLIEMPSKSAHGQTPRFPAEGLPAR
MCTRSFTALTEPRVPDPLEGAKASTPQEKSGKKTACVLKQRAAFKARKANGKPSNAASPP
VPNLAQSEDSDHKAKEADGVEMEAKDQQSMILRSRTRTQEVFYSKRRREKSAMDAGLKEG
KPPKKVLPNNHFPGSFKVSPQSRSERERKRLALPKARPGMGGKMSEQPLHSLKRKSAFIP
PVPAKKRNLVLRSNSHSGSNGKDEKPGASAGLFKRMPLAKKAKAKLSPKNSCEVVLKSPQ
VKENPDVCIKITSRAAFQGAMKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACRTATVSF
TVPAATSHSNPLSPSLPPEREQASKNAGAAPAAGEARPLNQALSQKAPAAPAAEQLCRSP
NNRSFRGKLMNSKKLSSNCFKGEAYSSPETLQHSGDGMAASGTGLLPKKRNRKGKVAAFR
TAKNSLEKCPHLSPALLFASREKAVAAAAAAAGKGEEGQREAKKPKAEDKGFSSAESSEG
RSSQAQTRAQKQRANHSNYNGYTKRQRKRLSHRKAPSVPSRCKSRAKRRHPQQAPLLSPA
EPEIRLKYVSCKRLRSDSRAPPFSPYVRVEKQDEFVTTCTVVNSPAEEARLHNSERSSSS
PSAQAGLSGAASLQQLRAALPLSSAMHLGPVVSKALNATCLVCCLCRNPANYKDQGDLCG
PYYPEDCLPKKKSRLKEKIKVEGLGEEPPSPAERLLKATDNNCATSTPGGKPPRLDSGAD
SAKQSALRSSSRGMFRKLQSCYCCDERTEGEEAAAVAAAAEKPRRHECGKAEPPPPDPAG
DTQEHWVHEACAVWTAGVYLVAGKLYGLQEAIKMAADVRCSSCQQVGATIGCCHKGCAQT
FHYICAIDTGCLLSEETFLLNCPRHKVGERTFRNKGKSLGVCCSLHSLLAVAIRSCLALN
QTSVSRQN
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgcgaaaggtgtggtttccatggcaaccagcagaactaccagccggca
tcttcacaagattcatcacgcctggagaattacaggcatcaaagccaggccgggccgcac
tgcgagcgtcagaggatggtggcaaaggagtactacggccagcagcagcagccgccaccg
ccaccgccgcagccccccctgccttaccaggggtacggggagaacagcaccgtggagaaa
taccaccgggggaataagcagctacgcagccagcaactcccaggccggccggcgtccttc
ccaaattacgctgtccaagagaacagtccctatccggcccgttattccggagaggaaagc
ctgcaggcctgggggtcaccgcagcaacagccacctccacccccacaacccttgccagga
ggggtggctaaatatgaggagaacttgttgaaaaagacagccgcctcctctagcagcagg
cagtaccacgagcaggcccctcagctcccgttccgaactcattccctgcacctccagcag
cagcagcagcagcagcaacagcagcaacagcagccgcccaccttgacctaccccaagctc
ccgaggcagaaaatccagaatgacgtggcctcccccatgcccttcccgcagggcgcccac
ttcagccagcattcccagtcgttcccggcctcctcgacgtacacgtccgtccagagcggg
agccaggccgcacattcctacaaaagctgcaacgctccctcggcggcaccgcagcatgaa
aggactctgggcaacgtctccagcctgccctctgggcagcgggtccagggcctacatggc
taccagcctaaccgaatcagctacgaccagcagcagcagcaacaacaacaacagcagcag
cagtccatgcaaggaagacaccatgcccaggaagcccttcactatcagaacctcgcaaaa
taccaacattataaccagccgggacagagctactgccaagccgacgcccctgtgcggact
ccagaccagtattaccaaactttcagccccagttccagccattccccagctcgttcggtt
ggtaggtctccctcgtacagttcgacgccttccccgttgatgcccaacttggagaacttc
caatacagccagcagtctctgagcgcggggagcttcccagccagcctcgccgaccacagc
cattttatgcctttgttgaacccttcgcccaccgacggggcgagcccagatgctcagccg
cccgcaaactgcaagagcatgccgaaggagaagatccccgagaacctcttgtcggatctc
agcctgcagagcctcacggcgctcacctcccaagtcgaaaacatttccaacaccgtccag
cagcttctcctctccaagtccacggggatgccccagaagaaaggcctaaagaacccgccg
aggaccccggagcagctcaagggccagcactgcagccccgaaggcaacaattactccgcc
gagcaggcggggactcccctttcagaccccctgagcaccccgcagtcggtccacgctgaa
acccaggatggggattacctgagtggatctgaggagcagctggaaaggagcttcctctat
tgcaaccagagccgcagcccggctcgcgtcaacagcaactccaaggcaaagcctgagtcc
gtatccacgtgctcggtgacttccccggacgacatgtccaccaagtcagacgactcattc
caaagcatccacaccagcttgccgctggagagcttcaccaagtttgtgaccaacgagagg
gactgcccgagactgctcctcagcgccctttctcaggaggagctcgcctctgagatcatc
ggtttgcaagatgctatcaacgagaaagcagacaaaggctgggccagcccccctgctcca
aacaaagaccccgacaaatcccctttccacttagagaaccacagaacctgcctggattcc
atagtcaaaagtccatggtccaaccagggggactcaaatgccctcgccgagcccttgaag
ttggacaaagctctgggggggaataacgggaagaatttcaccgaggaagtctacaacaac
tcccaggtggcgtttacaacagcagagacgaaaaataccctgaaaacgaccagctctgtg
ggctacaattccaaacccaacatctcggctgccacttccagctccgaggccacgagcttc
agctgctactcaaatgccacggccaattcggtgggttctgaaaacgccatggagaacttc
gattggccggacgaaaacctcagcgacacgtggaaagagctggggtcgagcctccaaggg
tcagacatttccaagagtttgttctccggcaaactgagcgagacgtctgaggagaaaaaa
actgcttgctgcctgagtctctgcgatgctgagcaggcgccccaacaagcagagggcttc
gatcagccgcaggaggcaagcaagggagagaatctgacttacgacgaggccaccagagca
gacagtgagcgatggctggaagacaccactaggcagtcctgctcaggaggagacttcagt
gaacttcccatgatgtcctctccagacctgaaagaatccgatttggaaccggaagagtac
tcctctttgtgtgaactagcggcttccgaacaaaagtctttgacctatgatgcttttaca
cctaaggcagcggagaacgccccggccctctccctgcaagacacgccaggttcagcagaa
gaaatggcaaacgcggccgagaaagagaacgccactcctccttcgcacttatctgatcaa
tctgttatcctcttgggcccggctgttggcacggagacaaaagtgaaaagttggttcgaa
tcttccctgcaccacttgaagcctgaggaggaggaggtggtggggagtgaaaacgccttt
ccagatgataaggcagagacgctggcagcttcgctagtgactaaccaagcctctcttgag
caggtgccaataacctcagagccaacatctaggggcaagagcctccgcagtaagaaggtc
cactgcaggctgtcgggaggcgaggaacccgtccaacccatgtcaagcccatgcacgggc
aaccaggcagctggcatggtggccagcaaatgcccaggtccaaacaacctgattgaaatg
ccaagtaagagtgcccatggccaaactccccggtttccagcagaaggcttgccagcaagg
atgtgtacccgctcgttcaccgccttgactgaacccagggtgccagatcctttggaaggt
gcaaaggcctcgacccctcaagagaagtcgggcaagaagacggcgtgcgtcctgaaacag
agagccgctttcaaagctaggaaggccaatggcaaacccagcaacgctgcttccccaccg
gtcccaaatttggcgcagagcgaagactctgatcacaaggcgaaagaagccgatggtgtt
gaaatggaagcgaaagatcagcagtccatgatccttcgttccaggaccaggacccaggag
gtcttctacagcaagcggaggagagagaagagcgccatggatgcggggctcaaggagggc
aagccacccaagaaggtccttccaaacaaccatttccccggttccttcaaggtcagtccc
caaagcaggtctgaaagggagaggaaaaggctggcactcccgaaagccaggcctggaatg
ggtggcaagatgtccgagcagccgcttcacagcctgaagaggaagtccgccttcatccca
ccggttcctgcgaaaaagaggaacttggtcctgaggagcaacagtcacagcggcagcaac
gggaaggatgagaagccgggagcttccgccggcctgttcaagaggatgccgctggccaaa
aaggcgaaagctaagctgtcccctaagaactcctgcgaagtggtgctcaagtcccctcag
gtgaaggagaaccctgacgtctgcatcaagatcacctctcgggccgccttccagggagcg
atgaagacgaaagtgcttcccccaaggaaaggccggggcctgaagctggaagccatcgtc
cagaagatcacctctcccaacctgaaaaagtttgcctgccgaacagccaccgtctccttc
accgtccctgccgccacctcccacagtaatcccctcagcccgtccctgccaccggagaga
gagcaggcctcaaagaatgcaggcgcagccccagcggcgggggaagccaggccattaaac
caggccttgtcacaaaaggctcccgccgctccagcagccgagcaattatgcagaagcccg
aacaacagatccttcagaggaaaactaatgaacagtaagaaactgtcctccaactgtttc
aagggtgaggcctattcatctcccgagacgttgcagcacagcggtgacggcatggctgcc
agcggcaccggcctgctgcccaagaagaggaaccgaaaagggaaagtggcggccttccga
acggccaaaaatagcctggagaagtgccctcacctgagccctgctctgctttttgcatcc
agagaaaaggcggtggctgcagcggcggcggcagcagggaaaggcgaggagggacaaagg
gaggcgaagaagccaaaggccgaggacaaaggcttcagcagcgccgagagctccgagggg
aggtcctcgcaggcccagaccagggcccagaagcagcgggccaaccattccaactacaat
ggctacaccaagagacaaaggaagcggctcagccaccgcaaggcccccagcgtgccctcg
aggtgcaagagcagggccaagaggcggcacccgcaacaggctcccctgctgagcccggcc
gagcccgaaatccggctcaagtacgtgtcgtgcaagcggctgcggtcggacagccgggcg
ccccccttctcgccatacgtccgggtggagaagcaggatgagttcgtcaccacctgcact
gtcgtcaactctcccgccgaagaggcccggctgcacaatagcgagcgctcctcctcatct
ccgtctgcccaggccgggctttcgggggccgcatccctccagcagctgcgagccgccctg
cctctgtcgtccgccatgcacctcggcccggtggtatccaaggccctcaacgccacctgc
ctggtctgctgcctgtgccggaacccggccaactacaaggaccagggggacctctgcggg
ccgtactaccccgaggactgccttccgaagaagaagtcgcggctgaaagagaagatcaaa
gtggaggggctgggtgaggagcctccgtctccggcggaaaggctgctcaaagcgacagat
aataattgtgcaactagtacgccgggtggaaagccgccaaggttggacagtggcgctgac
tcagcaaaacagagtgctctccgctccagttcgagggggatgtttaggaaactacaaagc
tgttactgctgcgatgagaggacagagggagaggaggcggcggcggtggcggcagccgcc
gagaagcccaggaggcacgaatgcggcaaagcggagccgccacctccggaccctgccggg
gacacgcaggagcactgggtccatgaggcctgcgctgtgtggacagctggggtttacctg
gtggcgggaaagctctatggactgcaggaggcaataaagatggctgctgacgtgaggtgc
tccagttgtcagcaagtaggagcaaccattggctgctgccataaggggtgtgcccaaacc
tttcactacatatgtgccattgatacaggttgtttgttaagtgaagagaccttcttgctg
aactgccctagacataaggtaggtgagcggaccttcaggaacaaggggaaatctctgggg
gtttgttgctctctgcactctctcctggctgtggccatcaggagctgccttgcactaaat
cagaccagcgtaagtcgacaaaactga
DBGET
integrated database retrieval system
