Zootoca vivipara (common lizard): 118093319
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Entry
118093319 CDS
T07275
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118093319 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118093319 (CPSF4)
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118093319 (CPSF4)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118093319 (CPSF4)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118093319 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
118093319
NCBI-ProteinID:
XP_034988246
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All DBs
Position
LG11:9406319..9416751
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AA seq
269 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCDFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPPAPLPQQKLNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNSMGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacttatcgccagcgtggatcacatcaagttcgacctggagatcgcggtggag
cagcagctcggggcgcagccgctgcccttcccgggcatggacaaatcgggtgcagctgtc
tgtgatttttttttaaaagcggcctgtggaaaaggaggaatgtgtcccttccggcacatc
agtggcgaaaagacagtagtttgcaaacactggctacgagggctgtgcaagaagggtgac
cagtgtgaattcttgcatgaatatgacatgactaagatgccagagtgttatttttactca
aaatatggggaatgcagcaacaaggaatgcccatttttgcacattgacccagaatctaag
ataaaagattgcccttggtatgacagaggtttttgtaaacacggccccctctgtaggcac
agacatacccgacgtgttatatgtgtgaattatctggtaggcttctgtccagagggcccc
acttgcaaattcatgcaccctcgatttgaacttcccatgggaaccacagagcaaccacca
ctgcctccagcaccactgccacaacaaaagctaaataacaatccaccactacagaggtca
tcatccctcatccaattaacgagtcagaactcttctcccaaccaacagaggaccccacag
gtcattggagttatgcagtctcaaaacaacagcatggggaacaggggtcctcggccattg
gaacaggtcacctgttataagtgtggtgaaaaaggacattatgccaacagatgcaccaaa
ggacatttggcattccttagcggacaatga
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integrated database retrieval system
