Zootoca vivipara (common lizard): 118093469
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Entry
118093469 CDS
T07275
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118093469 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118093469 (TAF5)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118093469 (TAF5)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118093469 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
118093469 (TAF5)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118093469 (TAF5)
STAGA complex
118093469 (TAF5)
TFTC complex
118093469 (TAF5)
SAGA complex
118093469 (TAF5)
SLIK complex
118093469 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
CDK5RAP3
Cytochrom_D1
RAB3GAP2_N
eIF2A
Motif
Other DBs
NCBI-GeneID:
118093469
NCBI-ProteinID:
XP_034988526
LinkDB
All DBs
Position
LG12:1183966..1197427
Genome browser
AA seq
804 aa
AA seq
DB search
MAALPEEPAEAVTVKPDPDAGAPPAPPAPPPALPQSPAAAAAATAVAGAAAAPSAPSAAA
PLAEGGESLAAGTDAKPPVAPSPAPPASQLPTDRQTLLAVLQFLRRSNLRESEEILRREA
RLLADEVAADPGSSAPGVQASHGGEGQEPGVGATGSGEALLGSVTFGQTGATISPGAAAA
PPAVALGPPGKVGVFVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAEL
SQLFYPLFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNET
MLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMV
GSLAGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSMGSKSKK
QDPNAPPQTRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAV
DITDDSSMIVGGFADSTVRVWSVTPKKLRSVKSAADLSLIDKESDDVLERIMDERTASEL
KILYGHSGPVYGTSFSPDRNYLLSSSEDGTIRLWSLLTFSCLVGYKGHNYPIWDTQFSPY
GYYFISGGHDRVARLWATDHYQPLRIFAGHLADVTSTRFHPNSNYVATGSADRTVRLWDV
LNGNCVRIFTGHKGPVHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYT
LRFSRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMSK
STPVTHLHFTRRNLLLAAGAYSPQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgccggaggagccggccgaagcagtcaccgtcaagccggaccccgacgct
ggagcgccgccggcaccacccgctcctcctcccgctctccctcagtccccggcggcagca
gcagcagcgacggcggtagcgggagccgctgctgctccctctgccccctcggccgccgct
cctctagcggaagggggcgagtcgttggcggcaggaaccgacgcgaagccgccggtggcg
cccagccctgcgccgcccgcttcgcagctgcccaccgaccggcagacgctgctggctgtg
ctgcagttcctgaggcgcagcaacctccgcgagtccgaggagatcctccgcagggaggcc
cggctgctcgccgacgaagtcgcggcggatcccggctcctcggcgcccggagtccaggcg
tcccatggcggggaagggcaggagcccggcgtcggcgccaccggctctggggaagcgctg
ctcggctcggtcacctttggccagaccggggccaccatctctccgggcgctgccgcggcg
cctcccgcagtggccttggggccgcctgggaaagttggagtctttgtggaagatcagcca
gatgtaagtgcagtactgtctgcctacaatcagcaaggagacccagcgctttatgaagag
tactacagtggactgaaacacttcattgaatgtgctctcgactgtcatcgagctgagtta
tcacagcttttttatcctctctttgtacatatgtacttggagctagtctacaatgggcat
gaaaatgaagcaaagtccttctttgaaaagtttcatggggatcaagagtgttattatcaa
gatgacttgcgtgtactgtcaagtttaaccaaaaaagagcacatgagagggaatgaaaca
atgctggattttcgaacaagcaagtttgtgctgcgaatttcccgtgattcttatcagcta
ttgaagagacaccttcaggaaaaacagaacaatcagatctggaatattgttcaggaacat
ctttacattgatatctttgatggaatgcctcgcagtaaacaacagattgatgctatggtg
ggaagtttggcaggagaggcaaaacgggaggctaataaagcaaaggtcttttttggccta
ttaaaggaaccagaaattgagttgcctttggatgatgaagatgaagagggggaaaatgag
gagggcaagccaaagaagaagaagccaaaaaaagacagcatgggatcaaaaagtaaaaag
caagatccaaatgctcctccacagactagaatcccgcttcctgagcttaaggattcggat
aagctggacaaaataatgaatatgaaagaagccactaaacgtgtacgtcttggtccagac
tgcctgccttccatttgtttctacacattccttaatgcataccagggccttacagcagtg
gacattacagatgactctagcatgatcgttggaggctttgctgactccactgtcagagta
tggtctgtgacacccaaaaagctacgcagtgtgaaatcagcagcagatctcagtctcata
gataaagaatcagatgatgttttagaaaggatcatggatgagagaacagcaagtgagttg
aagattttatatggtcacagtggacctgtctatggtaccagcttcagtcctgataggaac
tacttgctatcatcttcagaggatggcactatcagactgtggagcctcttaaccttttct
tgtctagtcggatacaaaggacacaactaccctatatgggatacacagttctctccctat
ggatattactttatatctggaggtcatgacagagtggctcgcttgtgggctacggatcac
taccagcctttgcggatctttgctggccatcttgctgatgtcacatcgacgcgttttcac
ccaaactccaactacgttgctacaggctcagcagataggactgtgcggctgtgggatgtc
ctgaatgggaattgtgtcagaattttcacaggacataagggaccagttcattcattggca
ttttctcctaatggaagattcttggcaactggggcaacagatggaagagtgcttttgtgg
gatattgggcatggtttgatggttggagaattaaaaggacacacagacacaatctacaca
ctcagattcagtagagatggagagattttagcatcaggttcaatggataacacggtaaag
ctatgggatgctgtgaaagcctttgaggacttagaaacagatgattttactacagccact
ggacatataaacctgcctgaaagctctcaagacttgctgttgggtacatacatgtccaaa
tcgacccctgtcacacaccttcattttacccgcagaaatttgcttcttgctgctggggca
tacagtcctcagtga
DBGET
integrated database retrieval system
