Zootoca vivipara (common lizard): 118093590
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Entry
118093590 CDS
T07275
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118093590 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118093590 (EXOSC1)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118093590 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
118093590 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
118093590
NCBI-ProteinID:
XP_034988909
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Position
LG12:complement(8542946..8552759)
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AA seq
194 aa
AA seq
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MAPARYCVPGERLCSLEEGTPGSGTYTRHGSIYASLAGCLMKKSENGMLPVVSVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDVRATEKDKVEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHSKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcgcggtactgcgtccctggagagagactctgcagcttagaggaaggaacc
cccggaagcggcacctacacccgtcatggttcgatctatgcctccttggctggttgtctc
atgaagaaaagtgagaatggcatgctcccagtggtttctgtgatgcgggacgtggaatct
cagcttcttcctgatgtgggagctacagtgacgtgcaaggtttgcagcattaactctcgt
tttgccaaggtgcacatcttgtatgttggctctacgccattaaaatccccattccgtgga
actatccggagagaagatgtcagagctacagagaaagacaaggtagaggtttacaagagt
ttccgcccaggagatattgttttggccaaagttatctctctgggtgatgcacagtccaac
tatttgctgacaacagcggaaaatgagctgggggtagtggtggctcatagtgaagcagga
gtacagatggtgccaatcagctggtgtgaaatgcagtgccccagtacacatagcaaggaa
ctgcgcaaggtagccagagtacagccccagtttctgcagacgtag
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