KEGG   Zootoca vivipara (common lizard): 118093590
Entry
118093590         CDS       T07275                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118093590 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zvi03019]
    118093590 (EXOSC1)
Messenger RNA biogenesis [BR:zvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     118093590 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     118093590 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 118093590
NCBI-ProteinID: XP_034988909
LinkDB
Position
LG12:complement(8542946..8552759)
AA seq 194 aa
MAPARYCVPGERLCSLEEGTPGSGTYTRHGSIYASLAGCLMKKSENGMLPVVSVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDVRATEKDKVEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHSKE
LRKVARVQPQFLQT
NT seq 585 nt   +upstreamnt  +downstreamnt
atggctcccgcgcggtactgcgtccctggagagagactctgcagcttagaggaaggaacc
cccggaagcggcacctacacccgtcatggttcgatctatgcctccttggctggttgtctc
atgaagaaaagtgagaatggcatgctcccagtggtttctgtgatgcgggacgtggaatct
cagcttcttcctgatgtgggagctacagtgacgtgcaaggtttgcagcattaactctcgt
tttgccaaggtgcacatcttgtatgttggctctacgccattaaaatccccattccgtgga
actatccggagagaagatgtcagagctacagagaaagacaaggtagaggtttacaagagt
ttccgcccaggagatattgttttggccaaagttatctctctgggtgatgcacagtccaac
tatttgctgacaacagcggaaaatgagctgggggtagtggtggctcatagtgaagcagga
gtacagatggtgccaatcagctggtgtgaaatgcagtgccccagtacacatagcaaggaa
ctgcgcaaggtagccagagtacagccccagtttctgcagacgtag

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