Zootoca vivipara (common lizard): 118093710
Help
Entry
118093710 CDS
T07275
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118093710 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118093710 (VPS8)
Membrane trafficking [BR:
zvi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118093710 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
zf-RING_Vps41
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Peptidase_M64
Motif
Other DBs
NCBI-GeneID:
118093710
NCBI-ProteinID:
XP_034989214
LinkDB
All DBs
Position
LG12:11970762..12061595
Genome browser
AA seq
1411 aa
AA seq
DB search
MEDELKMESQNLDQDQGPFVADESSQQPLCQEAPSPKLSVTELSRELDSKSELIDDKEFD
IPQVDTPPTLESILNETDDEEEPFVLEDPSLLNIDNIDTHSYDTSSVASSDSGDRTHLKR
KKKLRDSFSIHGSVIRLSLLKGISAQIVSAAAKVDAGLPTAIAASSLIAVGTSHGLALIF
GKDPNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSIT
DAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFRRVMGVRTCESRCLFSGSKGEVCCI
EPLHAKAELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWYF
VAVQTSVNPVLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYDLINFTWINSRTVVLL
DSVEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSIS
NCGGQIFYLGTKSVHVMTLRSWRERIDHLLKQDCLNEALALAWSFHEGKAKAVVGLSGDE
QKRKAVVADRMVEILIHFADRTMKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRMDLLF
SQMYDKMSENSVAKGVFLECLEPYILSDKLMGITAQIMKDLLLHFQDKNLMANMEACIVH
MDITSLDIQQVVLMCWENRLYDAMIYVYNSGMNDYITPMEKLFKVIAHPLSAGKSLSDEQ
VIMGNKLLVYISCCLAGRAYPLGNIPEDLVPLVKNQVFEFLIRLHSAEAPTDEEVYPYVR
TLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFL
ARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEETRLIQ
MAEKAEFYQICEFMYEREHRYDKIIDCYLRDPLRKEEVFTYIHNILSIPGYNAEEKQSVW
QKAMKHIEELLSVSPFKAADLISVHFSEQIEQIIQNLQDQCLLFQFLRSLLDPREGVNQE
LLQLSPFVTEQFIELLCRYDPDQVLETLQFLESYRLEEAIQITQKYQLHEASSYLLEKKG
DIHGAFLVMLEWLQSKLLTLTCEDESSIEFPSLKDIEDSLAKTIALCQRNSHKLNQPQRE
ALWFPLLEAMMSPQKLSSSTALCHYSEFLKNLTMQVLNNMAAFIALPLILQKILQDPVYG
RGKLGEIQGLVLGMLDSFNYEQTLLETTTNLLNHDLHWSLRNLKASVTRGLNPKQDYCCI
CLQQYKRRQETADQIIVFSCGHLYHSLCLLSKECGTEKDGQMRWTCFKCNASNKGGKLSG
TCLEMKKGTPVSLAQTNSEAILDPQQAQAFDQLCRLYRGTSRLALLTELSRDRGGEKHGP
FHISQGDSALNSVFQNETFQLHLTPPPLVED
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaactgaagatggagagtcaaaaccttgaccaagatcaaggtccctttgtg
gcagatgaatcaagtcagcagccattgtgccaggaagccccttcccccaagctgtctgtg
actgaattgagtagagagttggactccaagagtgagctgatagatgacaaggagtttgat
attcctcaggttgatactcccccaacactggaaagtattttaaatgagactgatgatgaa
gaagagccatttgttcttgaggatccttcccttctaaatatcgataacattgacactcac
tcatatgatacttcatctgtagcgagctctgacagcggcgatagaacacacctgaaaagg
aagaagaaacttcgtgattctttctccatccatggctctgtgatacggctgtcccttctg
aaaggaatctctgctcaaatagtatctgcagcggccaaagtggatgctggcttacccact
gcaattgcagcctcaagtctcatagcagtgggaacatcccatggactggcactgatattt
ggcaaagaccctaaccaggctcttcggctttgcttgggcagtactgcagttggagcacag
tatggggctatatctgctcttagcatcaacaatgattgttcaagacttctgtgtggtttt
gcaaaaggacagattacaatgtgggatctggctagtggaaagcttttgagatcaataaca
gatgctcatcctccaggaacagcaattttgcacattaagtttacagatgatccaactcta
gcgatttgcaatgacagtggaggctcagtattcgaactctctttcaggagagtcatgggt
gtgagaacatgcgagtcacgctgcttgttcagtggttccaagggagaagtctgctgcatt
gagcctttacatgcaaaggctgaactgagagaccatcccatcacccagtactccctgcta
gcaatggcttccttaacaaagattcttgtcattggcttgaaaccgtctttgaaagtgtgg
atgactttcccatatggtcgtatggacccatccagtgttccattgctagcatggtatttt
gttgctgtacagacatctgtgaatcccgtgcttgccttctgccgaggagatgttgtccat
ttccttctggttaaaagagatgaatctggagcaatccatgttacaaagcagaagcagcta
catctgcactatgacctcattaattttacatggataaattcacgcacagtggtgcttctg
gatagcgtggagaaactgcatgtgatagatcgtcagacacaggaggagcttgagactgtg
gagatctcagaagtccagttagtgtacaacagcagccatttcaaatcattggctacagga
ggcaatgtcagccaagcactggcgctggtgggggagaaagcttgttaccagtcaatcagc
aactgtggtggtcaaattttttatttaggtacaaagtctgtccatgtgatgacactgagg
agctggagagagagaatagatcaccttctgaagcaagactgccttaatgaagcactggct
cttgcttggtcctttcacgaagggaaagccaaggctgtcgtagggttgtctggagatgaa
cagaaacgaaaggctgttgttgcagacagaatggttgaaattcttatccattttgctgat
cgaacgatgaagaaatgtcctgatcagggtaaaatccaggttatggagcagcactttcag
gatatggtgcctgtcattgttgattactgccttctgcttcagcggatggatctgttgttt
agccagatgtatgacaagatgagtgaaaattctgtggcaaagggtgtctttctggagtgt
cttgagccatacattttaagtgataaattgatgggaattacagctcaaattatgaaagat
ttgctgcttcacttccaagataagaatttaatggcaaacatggaggcttgcattgtacat
atggatatcaccagcctagacatacagcaggtggtcctcatgtgttgggagaatcgtttg
tatgatgccatgatctatgtctacaacagtggcatgaatgactatattacaccaatggag
aaattgttcaaggtcattgctcatcctcttagtgctggaaagtctctctcagacgagcaa
gtcatcatgggcaacaagcttcttgtctatataagttgctgtttggcaggtcgagcttat
ccactgggcaatattcctgaagatctggtacctttggttaaaaatcaggtctttgaattc
ctcattcgtttgcactcagcagaggcacccaccgatgaagaggtttacccctatgtccgc
accctgctgcacttcgatacacgggagttcctcaatgttcttgcactgacatttgaagac
tttaagaatgacaagcaagctgtagagtaccaacagagaattgtggacatccttctgaag
gttatggtggagaattctgattttaccccctcacaagttggatgtctctttactttcctt
gcccgacagcttgctaagcccaacaacacgctgtttgtaaataggacgctgtttgaccag
gtccttgaatttctctgcagtcctgatgatgattcacggcactctgagagacagcaggtt
cttctagaattgctccaagctggaggcatagtgcagtttgaagagaccagactcattcaa
atggcagaaaaggctgaattctatcaaatctgtgagtttatgtatgaacgggaacatcgc
tatgataagataattgactgctacttacgagatccattgagaaaggaagaagttttcact
tatatccacaatatactctccattcctggatataacgcagaagaaaaacagtctgtgtgg
caaaaagctatgaaacacattgaggagctgttgtcagtgagtccctttaaagcagccgat
ctgatttcggttcacttcagtgagcagattgaacaaataattcagaaccttcaggatcaa
tgtttgcttttccagtttttgaggagcctacttgacccaagggaaggtgtcaatcaagag
ttgcttcagctttctcccttcgttactgagcagtttattgagttgctgtgtcggtatgat
cctgaccaggttttagagactttgcaattcctggagtcctacaggctggaagaggcaatt
cagatcacacagaaataccaactccatgaagcttcttcctatctacttgagaagaaagga
gatattcatggtgccttcctagttatgcttgagtggctacaaagcaagttgttgacactt
acatgtgaagatgaaagttcaatagaatttccttcattaaaggatattgaagatagctta
gcaaaaacaattgcactttgccagaggaattcacacaagttaaatcaaccacagcgagag
gcactgtggtttccactcttagaagcaatgatgtctccccaaaagttgtccagttctact
gcgctgtgtcattactctgaatttttgaagaacttgacgatgcaagtgttgaacaacatg
gcagcattcattgccctgccactgatcttgcagaaaattctacaggatccagtctatgga
agaggaaaactgggagaaattcagggtcttgttctgggtatgctagacagctttaattat
gaacaaactcttttggagactacaaccaatctactcaaccatgacctccactggtcctta
cgtaatttgaaagcatctgtgactagagggctaaaccccaagcaagattactgttgtatt
tgtctacagcagtacaagagaagacaagagactgctgaccaaatcatagtcttcagctgt
ggccatttgtaccactctctctgcctgctgagtaaagagtgtggcactgaaaaagatggc
cagatgagatggacttgttttaaatgcaatgcaagtaacaaaggaggaaaactaagcggg
acttgcttagaaatgaagaagggaactcctgtatccctggcacagaccaattctgaggcc
atcttggatccacagcaagctcaagcttttgaccagctttgtcgtttgtaccgaggaaca
tcaaggttggctcttctgactgaactctcacgggaccgtggtggagaaaaacatgggccc
ttccatatctcccagggtgattctgcactgaatagtgtcttccagaatgagaccttccaa
cttcacctcactcctcctcctctagtggaagactaa
DBGET
integrated database retrieval system
