Zootoca vivipara (common lizard): 118093736
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Entry
118093736 CDS
T07275
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118093736 (TRUB1)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
118093736 (TRUB1)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118093736 (TRUB1)
Prokaryotic type
118093736 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
118093736
NCBI-ProteinID:
XP_034989293
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Position
LG12:6974256..7015323
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AA seq
287 aa
AA seq
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MSAAVLEAVRCKALAAQLLSFSGLFAVYKPKGCTSAAVLNRLRAKLLAETGMPKPSRRKR
NKMLKIGHGGILDSSAAGVLVVGIGKGTKMLTSLLAGSKKYTAVGELGKATDTFDSTGKV
TEEKPYDWITKEDLENVLQKFTGSIMQVPPIYSALKRDGQRLSTLVKKGEVVEAKPARQV
MVYSLTLRSFKPPFFTLDVECGGGFYVRSLVNDIGKELSSCATVLELTRTKQGPFTLEEH
VLYEDKWTIDEIARSLECCMPLLQEEPPRKKLKMELSEECAMNSEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggcggtgctggaggccgtccggtgcaaagcacttgccgctcagctgctgtct
tttagcgggctctttgccgtgtataagcccaagggatgcacctcagccgctgtgctgaac
cggcttagggcgaagctgctggcagaaaccggtatgccaaagcctagtagaaggaagagg
aataaaatgttaaagattggacatggtgggattctggatagcagtgctgcaggagtgcta
gtggttggcattggaaaaggaactaaaatgctgaccagtttgctggcaggttctaagaaa
tacacagctgttggggaattgggaaaggcaactgacacatttgattctacaggcaaagta
acagaagaaaaaccttacgattggataacaaaagaggatcttgagaatgtcctgcagaag
ttcacaggcagcatcatgcaagttcccccgatctattctgccctgaagagagatggacag
aggttgtccactttggttaagaaaggagaagttgttgaagcaaagcctgccagacaagtt
atggtctacagtctcactcttaggagtttcaagccgcccttcttcacgcttgatgttgaa
tgtggcggcggcttttatgtcagaagcttggtcaacgatattggcaaagagctgtcctcc
tgtgccactgtgctggaactgacccgaaccaaacagggaccatttaccctagaagagcat
gttctttatgaagacaaatggaccattgatgaaattgcccggtctctggagtgttgcatg
cctctcctccaggaagaaccgcctcgtaaaaaattaaagatggagctgtctgaagaatgc
gccatgaactctgaagataagtga
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