Zootoca vivipara (common lizard): 118094063
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Entry
118094063 CDS
T07275
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118094063 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118094063 (DHX36)
03012 Translation factors [BR:
zvi03012
]
118094063 (DHX36)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118094063 (DHX36)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118094063 (DHX36)
Translation factors [BR:
zvi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118094063 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
Ntox8
AAA_14
Sir1
NPHP3_N
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
118094063
NCBI-ProteinID:
XP_034989934
LinkDB
All DBs
Position
LG12:complement(28080345..28110492)
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AA seq
993 aa
AA seq
DB search
MSYEHRRDWGRGGGPRASQSSSSSSGRGGAGGGGRGGGGGGGRGRPPPHLKGREIGLWYA
RRQGEKSKEAERQQRAVVRMDERREEQIVQLLNTVQSKNEKEQEAMSWWSDEEGYTKETP
PKPKPVVEKPVVERAPKRTRPILEKTFLDQDSAYLLEENKPDVDLDEQLKEELKKKKTDS
RYIEMQRFREKLPSYGMRKELVNIINSSRVTVISGETGCGKTTQVTQFILDDYIERGKGS
SCRIVCTQPRRISAISVAERVAAERAEVCGNGKSTGYQIRLESRLPRKQGSILYCTTGIV
LQWLQSDKELASVSHVILDEIHERNLQSDVLMTIIKDLLSVRLDLKVILMSATLNAEKFS
DYFDSCPMIHIPGFTFPVKEYLLEDVIEKLRYIPENTDRRPHWKKRFMQGHISRPEKEEK
EELYHEQWPDYLKQLRGRYSESTIDALGMMDDEKVDLDLIAALIRYICLEEEDGAILVFL
PGWDNISTLNDLLMSQVMFKSDRFVIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAE
TSITIDDVVYVIDGGKIKETNFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGNCYHLY
NGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAHFLSKLMDPPSRDAVLLSIKNLM
QLNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL
GKEKVADARRKELSKSSKSDHLTIVNAFKGWEEAQRRGFRCEKDYCWEYFLSSNTLQMLR
NMKGQFAEHLLAAGFVNSRSPRDPKSNTNSDNEKLLKAVICAGLYPKVAKIRANFSKKRK
MVKVSTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGG
DISIQKDKDQDTIAVDEWIVFQSPARIAQLVKDLKKELDDLLQEKIENPHPVDWNNTKST
DTALLTAIIDLITTQENQTARNSAPRFQSEEYS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgtcgggattggggccgcgggggcgggccccgtgcttcgcagtcg
tcgtcatcgtcctctggccgcggcggagcgggaggcggcggaagaggtggcggcggcggc
ggcggtcggggccgaccccctccgcacctgaagggccgcgagattggcctgtggtacgcg
cggcggcagggcgagaagagcaaagaggccgagaggcagcagagagctgtggtgcgtatg
gatgagcgcagagaagaacagattgtacagttgctgaacactgtccagagcaaaaatgaa
aaagaacaagaagccatgtcttggtggtctgatgaagaagggtacacaaaggagacccct
ccaaaaccaaagcctgttgtggaaaaacctgttgttgagagggcacccaaaagaactaga
ccaatattggaaaaaacattccttgatcaagattcagcatatctcttagaagaaaataaa
cccgatgttgatttagatgagcaacttaaagaagaattgaaaaagaaaaaaactgattcc
agatatattgaaatgcagagatttcgtgagaagctaccttcttatggaatgagaaaggag
cttgtcaacatcataaatagcagtcgggtaactgttataagtggggagactggctgcgga
aagacaactcaagttactcagttcatcttggatgactatattgagcgagggaaggggtct
tcctgcaggattgtatgtactcagcctagaaggatcagtgctatctctgtagcagagagg
gttgcggcagaaagggctgaagtatgtggtaatggaaagagtacaggatatcaaattcgg
cttgaaagccggttgccaaggaaacaaggctcaattttgtactgcacaacaggaattgtc
ctacagtggctccagtcagataaggagttggccagtgttagtcatgtaatccttgatgaa
atccatgagagaaatctccaatcagatgttttaatgaccataatcaaagatctgctaagt
gtacgactcgacttgaaagtcatattgatgagtgctacgctgaatgccgagaagttctca
gactattttgacagttgtcctatgatccatattcctggattcacctttcctgtcaaggag
taccttttggaagatgtaattgagaagctacgatacattccagaaaatacggatcgcaga
ccacattggaaaaagaggtttatgcaggggcacataagcaggccagaaaaggaagaaaaa
gaagaactttatcatgagcagtggccagattatttgaagcagctgagagggcggtattca
gaaagtacaattgatgcattgggaatgatggatgatgagaaagttgaccttgatttgatt
gcagcactgatcagatacatttgtcttgaagaagaggatggtgcaatacttgtatttctt
cctggatgggacaacattagcactctaaatgaccttctgatgtctcaagttatgtttaag
tcagataggttcgttattatacctctgcattccttgatgcctactgttaaccagacccag
gtttttaaaaggaccccccctggagtccgtaaaattgtaattgctaccaacattgctgag
actagcatcaccatagacgatgtggtatacgttatagatggaggaaagataaaggaaact
aactttgatacacagaacaacattagcacgatggctgcagagtgggttagcaaagcaaac
gctaagcagaggaaaggtagagcaggaagagtccagcctggtaactgctaccacttgtac
aatggtctgcgtgccagtttgttagacgattatcagttgccagaaatcctgaggacacct
ttggaagaactttgtttgcaaatcaagatcttaaagcttggaggaattgcccattttctg
agcaaactgatggatccaccatcacgtgatgctgtgttgttatccataaaaaatctcatg
cagctgaatgccttggataggcaagaagaattgactccccttggagtccatttggcgcga
ttaccagtggagccgcacataggaaaaatgattctctttggagctttattctgttgctta
gatcctgttctcactattgctgccagcctcagcttcaaggacccttttgtcattcccttg
ggtaaagaaaaagtagcagacgcaagaagaaaggaactgtcaaagagttccaaaagtgat
cacctcaccattgtgaatgctttcaagggttgggaagaagcccagcgacgtggcttcagg
tgtgagaaggattattgctgggagtattttctttcttcaaatactctgcagatgctgcgt
aacatgaaagggcagtttgctgaacatctccttgcagctgggtttgtgaatagtagaagc
cccagagaccccaaatccaacactaactcagacaatgagaagctactcaaagctgttatt
tgtgctggcttatatccaaaggttgcaaagatccgagcaaacttcagcaaaaagagaaaa
atggttaaagtttccactaaaacagatggaacggttaacattcatcccaagtctgtcaat
gttgaagagacagaattccattacaactggcttgtttaccatttgaagatgaggacaagc
agcatatacctgtacgattgcacagaagtctctccatactgccttttgttctttggggga
gatatttctattcagaaggacaaagatcaggatacaatcgctgtggatgagtggattgtt
tttcagtctccagcaagaatagcacagctagtgaaggatttgaaaaaagaattggatgac
cttctacaagagaaaatagaaaacccacaccctgtggactggaacaatactaaatcaaca
gacactgcactgctgacagccattatagacttaatcacaacacaggagaatcaaactgcc
agaaactctgccccccgtttccagagcgaagaatacagttaa
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