Zootoca vivipara (common lizard): 118094204
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Entry
118094204 CDS
T07275
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118094204 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118094204 (POLR1A)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118094204 (POLR1A)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118094204 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
118094204
NCBI-ProteinID:
XP_034990201
LinkDB
All DBs
Position
LG13:complement(9779032..9809395)
Genome browser
AA seq
1715 aa
AA seq
DB search
MAAAKEAPWRRLTGLSFGMYTEEEIRNLSVKSITNPLFLDNAGTPSPNGLYDLSLGPTDN
KEVCATCTQDFNNCPGHLGHIELPLTVYNPLFFDKLFLLIRGSCLSCGHLTCPRAVIHLL
LNQLKLLEVGLLQAAHDLEAVLSRFLDDNADVPGADVEEVLSSHTKELLQNNQFREHGAH
VKNVCEYRSRLISLFWKLHMGSKRCPNCKAGRSLVRKEHNSKLTVTYPTKVVKSGKQMVV
EEAATIDETQLGKRGYMTPAIAKKHVEALWKNEGFFLCKLLSGMTAIGDSSFNPDMFFLD
KLVVPPSRYRPVNRIADQMFANGQTVNLQAVMKDALLTRKLLAFIAQEQCQSVQIEEGDL
KTINTDKQLVEPLDRSVLVTIPGQTTADKLYNIWIRLQSHVNIVFDSDMDKLNTEKYPGV
RQFLEKKDGLFRKHMMGKRVDYAARSVICPDMYIRTNEIGIPMVFATKLTYPQPVTPWNV
QELRQAVINGPNEHPGASMVINEDGSRTILSTASQTQREAIAKQLLTPSTGAPKPGIKIV
CRHIKNGDVLLLNRQPTLHRPSIQAHRARILSEEKVLRLHYANCKAYNADFDGDEMNAHF
PQNELGRAEAYVLACTDEQYLVPKDGQPLAGLIQDHMISGTSMTTRGCFFTREQYVELVY
QGLVDKKGMVKLLPPAIIKPLHLWTGKQVVSTLLINVIPEDHIPLNLLGKAKIDGKAWMT
GSASRMHGSGLAFMCESQVVIRNGELLCGVLDKAHYGSSAYGLVHCCHEVYGGETGGKVL
TALARLFTAYLQFYRGFTMGVEDILVKPRADHKRRKIIKESTRCGTKAVQAAFNLPQTSL
DEEVRGKWQDAHLHKDQRDFNMVDLKFKEEVNHYSNEINKVCMPLGLHRSFPENNLQLMV
QSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDFPPRSGGFVAGRFLTG
IKPPEYFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLIVHYDLTVRDSDGSLVQFL
YGEDGLDIPKTQFLHSKQFPFITDNHKVIEKSKHLDEVLPKMDPQQANNQFRSIKRWQIK
HQPSLRREGGFLLFSQEKLADVKAQILPGELVNGRDPATLQLLKMWYELSEKKRRKYQKK
AVKCPDPSLAVWRPDIHFASVSETFEREVENFLREWDAQNNTSYSKSELSSQRLKDLLHL
KWQQSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVATAN
IKTPMMSVPVLNTNKAHKRVKRLKKKLTRVCLGEVLQKFDIEESLCLEGMVSKHRIYTIK
FSFLPYECYQEEKCVKPRDILHFMESRFFKILLETIKRKSSKLASYNSVSTRRAMQRDLE
GVGEYGVSQENQGDDEAVAEEEGGGRGGGAPDAETGEGDDDATDAKRRAKQEEEVDYESD
EDNEVDDDDIPDEEETQGLDERSPEETESQDKHYAPSSSQQTPKKRKNLDELAQHRINAV
QESSDSIESYAYDIKNELWCKVSLKLPLTKQYFDLASLVTSLANNTVVQETKGITRCLLN
ETSNKKGEMVLTLQTEGINLPELFRYADIFDVNRLYCNDIHAMANTYGIEAALKVLEKEI
KDVFAAYGIVVDPRHLSLVSDYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKEAT
MQGSHDELQSPSACLVVGKVVKGGTGLFELKQPLK
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgaaggaggcgccgtggcggcggctgacgggcctgtcgttcgggatgtac
acggaggaggagatacggaatctgagtgtaaaatctataacaaacccactttttctggat
aatgcgggcactccgtcaccgaatggactgtacgatttgtctttggggccaactgacaac
aaagaagtgtgtgctacttgcacgcaggacttcaacaactgcccaggtcatctgggtcac
atagaactgcccctcactgtctacaatcctctcttttttgataaattattccttttgata
cgaggttcctgcttgagctgtggccacctgacatgtccacgggctgtgattcatttactg
cttaaccagctgaagcttctggaagtggggttgcttcaagcagcccatgatcttgaggcc
gtcctaagcaggtttttagatgacaatgcagacgtaccaggtgcagatgtggaagaagtg
ctgagttcgcacacaaaggaattgctccaaaataaccagttcagagaacatggtgcacat
gtaaaaaacgtatgcgagtatagaagtagacttatctccctgttttggaaattacacatg
ggttcaaagagatgtccaaactgcaaagcgggaagatcacttgtccgaaaagagcacaat
agcaagctcactgtgacttaccctaccaaggtagtcaagtcaggcaaacagatggtagtg
gaggaagcagcaaccatagatgaaacccagctgggaaaacgtggctatatgacacctgct
attgccaaaaaacacgttgaagctttgtggaagaatgaaggttttttcctttgcaagctt
ctctctggcatgacagccattggtgattcaagtttcaatcctgatatgttcttcctcgat
aaacttgttgttccaccttctagatatcgtcccgtgaatcgcattgcagaccagatgttt
gcaaatggtcagacagtgaacttgcaagctgtgatgaaggatgctcttctgactcggaag
cttctggctttcatagctcaggaacagtgtcagtcagtgcaaattgaagaaggagacctg
aagacgataaacacagataaacagcttgtggagcccctggaccgttctgtcttggtgaca
atcccagggcagactactgcagataagctttacaacatttggattcgtcttcagagccat
gtaaatattgtgttcgacagtgacatggataagttaaatactgaaaagtaccctggtgta
cgtcagtttttggagaaaaaggatggcctgttccgcaagcatatgatgggaaagcgagtg
gattatgcagctcggtcagtcatttgccctgacatgtacattcggaccaatgaaattggc
attcctatggtgtttgctaccaagctgacttatcctcagcctgtaactccctggaatgtc
caagaattgaggcaggcggtcataaatggtcccaatgagcacccaggtgcttccatggtt
atcaacgaagatgggtctcgcacgatactgagcacagccagtcagacccagagggaagcc
atagccaagcagctcctgactccttccacaggggcaccgaaaccagggataaaaattgtg
tgccgccatattaaaaatggagatgtccttttgctgaatcggcagcctacccttcacaga
ccctccatccaagctcatcgagctaggatcctgtccgaagagaaggtcctgaggcttcac
tatgccaactgcaaagcctacaacgctgattttgatggcgacgaaatgaatgcccacttc
cctcagaacgaactgggcagagctgaagcctacgtcctggcgtgtactgacgaacagtac
cttgtcccgaaggatgggcagccgctggcaggtttgatccaagaccacatgatctctggt
accagtatgaccactcggggctgcttcttcactagagaacagtatgtggaacttgtgtat
caagggctggtagacaaaaaaggaatggtgaagcttctccctccggccattataaagcca
ctacacttgtggacagggaagcaggttgtttctacattgttaataaacgtaattccagag
gatcatattccactgaacttgcttgggaaagctaagattgatggaaaagcctggatgaca
ggctctgccagtagaatgcatggatcgggtcttgcctttatgtgcgaatcgcaggttgtc
attagaaatggagagctgctctgtggggtgttggataaggcgcattatggcagctctgcc
tatgggttggtccactgctgccacgaggtctatggtggtgagaccggcggaaaggtcctc
acagctctggctcggctcttcactgcctacctccagttctacagaggttttacaatggga
gttgaagatatcttggtcaaaccccgggcagaccacaagaggcgcaagatcattaaagaa
agcacccggtgtggtacaaaggctgttcaagctgcgtttaacttgcctcaaacctcattg
gatgaggaggtccgagggaagtggcaagacgcccatcttcacaaagaccagagagatttc
aacatggtcgatctgaaattcaaagaggaagtcaaccattacagcaatgagattaacaag
gtgtgcatgcctcttggacttcaccggagtttcccagagaataacttgcagctgatggtg
cagtcaggagccaagggttctactgtgaatactatgcagatttcttgcttgctgggccag
attgagttggaaggtcgaaggcctcccttgatgccatctggcaaatcgttgccatgtttc
caaccttatgacttcccccccagatcaggggggtttgtggctggcagattcctcactggc
attaaaccgcccgagtacttcttccattgtatggctggtagggagggtctagtggacaca
gctgtcaaaaccagtcgttctggataccttcaaaggtgtatcataaagcatttggaaggg
ctgatagttcattatgacctgactgtgcgtgacagcgatggcagcctagtccagtttctc
tatggagaagatggcctagacatccccaagacgcagttcttgcattccaagcagttccct
ttcatcacggataaccacaaggtgatagagaaatcaaagcatttggatgaagtgttgccg
aaaatggacccccagcaagcaaacaaccagttcagatccatcaagagatggcaaatcaag
caccagccgtctttgagacgggaaggaggctttttgctcttttctcaggaaaagttggct
gatgtaaaagcacagatccttccaggagaacttgttaatggccgagatcctgcaactctg
cagttgttaaagatgtggtatgaattgagtgagaagaagcggaggaagtatcaaaagaag
gcagtgaagtgtccggatcctagccttgctgtctggcggccagacatccattttgcatcc
gtatcagaaacatttgaaagagaagttgagaatttcctcagagagtgggacgctcagaac
aacacgagctacagcaaatctgaactttcttctcagaggttaaaagacttgctgcatttg
aagtggcaacaatcgctctgtgacccaggagaagctgttggtctccttgctgctcagagt
attggagagccctccacgcagatgactctgaacacctttcactttgctggaagaggcgaa
atgaatgtcacactcggtatcccaaggttgcgggagatcctgatggtggctactgctaat
attaaaaccccaatgatgagtgttcctgtacttaataccaataaagctcacaagagggtg
aagaggctgaagaagaagcttaccagagtatgcttaggcgaggttttgcaaaaatttgac
attgaagagtctttgtgtttggaggggatggtaagcaagcaccgtatctacaccatcaaa
tttagtttcttaccatatgaatgctaccaggaagagaaatgtgtgaagccaagggacata
ttgcattttatggagtcgagattctttaaaatcttgcttgaaacaattaagaggaagagt
tcaaagttggcatcttacaactctgtgagcactcgaagagcgatgcagagggacttagaa
ggtgttggagaatatggtgtatcccaagaaaaccagggtgacgatgaagctgtagctgag
gaagaaggaggaggaagaggaggaggtgctcctgatgctgaaacaggtgaaggggatgat
gatgctacagatgcaaaaagaagagcaaagcaggaggaggaggttgattatgagagtgat
gaggacaacgaggtggatgatgatgatattcccgatgaggaagagacccaaggattggat
gagaggagcccagaggaaacggaatctcaggataagcattatgctccttcctctagtcaa
caaactccaaagaagaggaagaacttggatgaattagcacagcacagaattaatgctgtg
caggagagcagcgattccatagagagttatgcctacgacataaaaaatgaactgtggtgt
aaggtctcactgaaacttcctttaacgaagcagtactttgaccttgcctcacttgtgaca
tctctggcaaacaacactgttgtccaggagacaaaagggatcacacggtgtctcttaaac
gaaaccagcaataagaaaggagagatggtgctcactttacagactgaagggataaacctc
cctgagcttttccgatatgctgacatttttgatgtgaaccggctttattgcaatgatatt
catgcgatggccaatacctatggcattgaggctgccttgaaagtccttgagaaagagatt
aaagatgtgtttgctgcatatgggattgtggttgatcctcggcatctctctctggtgtcg
gactatatgtgcttcgaaggtgtttacaagccactcaatcggtttgggatacagtccaat
tcatcccccttgcagcaaatgacatttgagacgagctacaagtttctgaaggaagccaca
atgcagggctcccatgatgaactgcagtctccttctgcttgcctcgtggtaggaaaagtt
gtcaaaggaggaacgggcttgtttgagctgaaacagcctctaaaatag
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integrated database retrieval system
