Zootoca vivipara (common lizard): 118094252
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Entry
118094252 CDS
T07275
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118094252 (CASC3)
03015 mRNA surveillance pathway
118094252 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118094252 (CASC3)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118094252 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
118094252
NCBI-ProteinID:
XP_034990340
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All DBs
Position
LG13:complement(23222052..23241894)
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AA seq
709 aa
AA seq
DB search
MADRRRQRASQDSSEDEESDSPPGSAAPSPRGAHRSGLAVAGGGGGGGGAAVEAVSAEAP
VTVGGSPADSECESEDGIEGDAVLSDYESADDSEAEEGEYSEEETSKVDLKRESNETNEL
TRKSDKGDEKPESKGTVAGERQSGDGQESTEPTENKVGKKLPKHLDDDEDRKNPAYIPRK
GLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIR
STHNPDDIKPRRVRKPRFGSPPQREPDWANERPSKPPRQQSLESTPVPPRTFINRNSAGT
ARMPPPRTFPRPGGYKETRPCYRAVDVNSQHAPRFSEQSKHESNYRSRRSEPLPPREPSP
EVEIPHSRNSPVKKEEVVSESPAAPADVLQPPPDRPVEKKSYSRARRTRTKAGETGKLAE
EVPLPLGLTPAPLKTPEVIPSPSPAKTGNWEVPVEASLDGLEQDMTQLNITEQNWSPGQP
QFIQPQGIPNQMHIGAAPPPQFNRMEEMGVQAGRAKRYSSQRQRPVPEPAPPVHISIMEG
HYYDTLQFQGPIYTHSENPAPLPPQGVIVQPEMHLSHPGLHPHQTPAPLTNPGLYPPPVS
MSPGQQPPPPPPQPLLAPTYFSPPPGVMNFGNPSYPYPPGPLPPPPPPHLYPNAQAQSQV
YGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVNRAPVNISKRY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtcggaggcagcgcgcctcgcaggacagcagcgaggacgaggagtccgac
tcgccgcccggtagcgcggccccttcccctcggggtgcccaccgctctggcctggccgtg
gcgggaggaggtggcgggggcggcggcgctgctgttgaggccgtgagcgcggaggcgccg
gtgacggtgggaggcagcccggccgactcggagtgtgaaagtgaagatggcatagaagga
gatgctgttctttctgactatgaaagtgctgacgactcagaggctgaggagggggaatac
agtgaggaggaaacatccaaggtggacctgaagcgggagagtaatgaaactaatgagctg
acaagaaaatcagacaaaggggatgaaaaaccagaatcgaaaggcactgtggcaggcgag
aggcagagtggggatggccaggaaagcactgaaccaactgagaacaaggttggaaaaaag
cttcctaagcacctggatgatgacgaggaccggaagaaccctgcatacatacctcgcaaa
ggtcttttctttgagcatgaccttcgtgggcaaactcaggaagaggaagtccgacctaag
ggccgccagcgcaaactgtggaaagatgagggacggtgggagcatgacaagttccgggaa
gacgagcaggcaccaaaatcaaggcaggagttgattgctctatatgggtatgatatccgc
tcgacacacaaccctgatgacatcaagcccaggagagtgcgcaaaccaagatttgggagc
ccaccacagagagagccagattgggccaatgaaaggcctagtaagccaccacggcaacag
agcctagaaagtactcccgtgccgcccaggacattcatcaacaggaactctgcagggacc
gcacggatgcccccaccgaggactttcccaagacccggtggctacaaagagacccgtcca
tgctaccgtgctgtggatgtgaacagccagcacgcgcctcgcttcagtgagcagtcaaag
catgagagcaattaccgttccaggcgttcagagcccctcccaccacgagagccttctcct
gaagtagagattccgcacagtcgcaacagccctgttaaaaaggaagaggtggtttcggaa
agcccagcagctcccgcagatgttcttcagccaccaccggataggccagtggagaagaag
tcctactcccgggcaaggaggactcggaccaaagcaggcgagacagggaagttggccgag
gaagtcccgcttccattggggttgactcctgcaccgctgaaaactcctgaggttatacca
tccccctcgccagcaaagactggtaactgggaggtgcctgttgaagccagcctagatggg
ctcgagcaagacatgacccagttaaatataacagaacagaactggagcccagggcagccc
cagttcatacaacctcagggtattcctaaccagatgcacattggagcagctccaccccct
cagttcaacaggatggaggagatgggtgttcaggcaggccgtgcaaagcgttactcatcg
cagcgtcagaggcctgtcccagagcctgctccgcctgtgcacataagcataatggaaggg
cactactatgacacactacagttccagggaccgatctacactcacagcgagaatcctgcc
ccactgcctccccaaggggtgatcgttcagccagaaatgcatctctcccatccggggtta
catccacaccagacaccagcacctttgaccaaccctggtttatatcctcctcctgtatcc
atgtcgccgggacagcagccaccgcctcccccaccgcaaccactgctagcaccaacctac
ttctcccctcctcctggagtgatgaattttggcaatcccagttacccctaccctccagga
ccacttccgccgccgccacctccccatctgtatcccaacgctcaagcccagtctcaggtg
tatggaggggtcacctattataacacagtccagcagcaagtgcagccgaaaccttcacca
ccccgaagaacttcgcagcctgtcactatcaagccaccacctcctgaggttgtaaacagg
gctccagttaacatttctaaacgctattga
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