Zootoca vivipara (common lizard): 118094350
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Entry
118094350 CDS
T07275
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03020
RNA polymerase
zvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118094350 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
118094350 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118094350 (POLR2A)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118094350 (POLR2A)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118094350 (POLR2A)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118094350 (POLR2A)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118094350 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
118094350
NCBI-ProteinID:
XP_034990535
LinkDB
All DBs
Position
LG13:complement(44707777..44739071)
Genome browser
AA seq
1969 aa
AA seq
DB search
MHGGAPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKVLRCVCFFCSKLLVDS
NNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQDQGDEDITKEKGH
GGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFILGMDPK
FARPEWMICTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEEMVKDILSNAHIQNELEREFEKMKA
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINTRLPSDLHPIKVVDGVKELSKKLV
IVNGDDPLSKQAQENATLLFNIHLRSTLCSRRMIEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPD
FDVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYVAWSPSVGSGMTPGAAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGAYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggagcgccgtccggggacagcgcgtgcccgctgcgcaccatcaagcgcgtg
caattcggcatcctgagcccggatgagatgaaacggatgtcagtgacggaaggggggatc
aaataccctgagacaacagaagggggccgccccaaactggggggcctgatggaccctcgg
cagggtgtcattgaaaggacaggacggtgtcagacctgtgcaggcaacatgacagaatgc
cctggccatttcggacacattgagctagccaagcctgtcttccacgtcggcttcttgggc
aagacgatgaaggttctacgttgcgtctgctttttctgctccaagctgctggttgactct
aacaatccgaagatcaaagacatcctggccaaatccaaagggcaaccgaagaagcgtttg
acccacgtctacgacctttgcaaaggcaagaacatctgcgaaggtggggaggagatggac
aacaagtttggagtggagcaggaccaaggcgacgaagacatcacaaaggaaaagggtcat
ggcggctgcgggcgctaccagccaaggatccgacggtcgggcctggagctctacgccgag
tggaaacacgtgaacgaggactctcaggaaaagaagattctgctgagccccgagcgggtg
cacgagatcttcaagcgcatctcggacgaggagtgcttcatccttggcatggaccccaag
ttcgccaggcccgagtggatgatctgcacggtgctcccggtcccgccactgtctgtccgc
cccgctgtcgtcatgcaaggctctgcccggaatcaggacgacttgactcacaagctggcc
gacattgtgaagatcaacaaccagctgcggaggaatgagcagaacggcgcagccgcccac
gtcatcgccgaagacgtcaagctgctgcagttccacgtggccaccatggtggacaacgag
ctgcctgggctgccccgtgccatgcagaaatcggggaggcccctgaagtccctgaagcag
aggctgaaggggaaagaggggcgcgtgcgagggaacctgatgggaaagcgagtggacttc
tcggcccggacggtcatcaccccggaccccaacctctccatcgaccaggtgggcgtgccc
cgctccatcgcggccaacatgaccttcgccgagatagtgacgcccttcaacattgacagg
ctgcaggagctggtgcgcagagggaacagccagtaccccggagccaagtacattatccgg
gacaacggcgacaggattgacctccgcttccaccccaagcccagcgacctccacctgcag
atagggtacaaggtagaacggcacatgtgtgacggcgacatcgtcattttcaatcgacag
ccgacgctgcacaagatgtccatgatggggcacagagtgcgcatcctgccgtggtccacc
tttcgcctcaatctcagtgtgaccaccccgtacaatgccgactttgacggcgacgagatg
aacctgcacctcccccagtccctggagacgcgggcggagatccaagaactggccatggtg
ccccgtatgattgtcacgcctcagtccaacaggcccgtcatgggcatcgtgcaggacacc
ctgacggcggtccgcaagttcaccaagagagacgtcttcctagagaggggtgaggtgatg
aacctgctgatgttcctctccacctgggacggcaaagtgccccagccggccatcctcaag
cctcgccctctctggaccgggaagcagatcttctccctcatcatcccaggacacattaac
tgcatccgtacgcacagcacccacccggacgatgaggacagcggcccctacaagcacatc
tctcccggagataccaaggtcatcgtggagaacggggagctgatcatgggcatcctctgc
aagaagtcgctgggcacctctgccggctccctggtccacatctcctacctggagatgggc
cacgatgtcacccgcctcttttacagcaacatccagacggttatcaacaactggctgctg
atcgaaggccacaccattgggatcggggactccattgctgatgccaagacctaccaagac
attcagaacaccatcaagaaggccaagcaggatgtcatagaggtgattgagaaggcccac
aacaacgagctagagcccacccccggcaacacgctgcgccagacctttgagaaccaggtc
aacaggatcctgaacgacgcccgagacaagaccggctcctccgcccagaagtctctctcc
gagtacaacaacttcaagtccatggtggtgtcgggagccaagggctccaagatcaacatc
tcgcaggtcatcgccgtggtggggcagcagaacgtggaagggaagcgcatcccctttggc
ttcaagcaccggacactgccccacttcatcaaggacgactacggccccgagagcaggggc
ttcgtggagaattcctacctggccggtctcaccccaaccgagttcttcttccacgccatg
ggaggccgagaggggctgatcgacacggctgtcaaaacagctgaaacaggttacatccag
cggcggctgatcaagtccatggagtccgtgatggtgaagtacgacgccacagtgcgcaat
tccatcaaccaggtggtgcagctgcgctacggtgaggacggtctagcaggggagagtgtg
gagttccagaacctggccacgctcaagccttccaacaaggcctttgagaagaagttcaaa
ttcgactacaccaacgagcgggctctgcggcgcaccctgcaggaggagatggtgaaggac
atcctcagcaacgcccacatccagaacgagctggagagggagttcgagaagatgaaggcc
gaccgggaggtgttgagggtcatcttccctacgggagacagcaaggtggttctcccatgc
aacctgctgcgcatgatttggaacgcgcagaagattttccacatcaacacgcgcctgccc
tccgacctgcaccctatcaaggtggtggacggcgtgaaggagctcagcaagaaactggtg
attgtcaatggggacgaccccctcagcaagcaggcgcaggagaacgccacgctcctcttc
aacatccacctgcgctccacgctctgcagccggcggatgatcgaggagttccgcctgagc
ggggaagcctttgactggctgctgggcgagattgagtccaaattcaaccaggctattgct
caccctggcgagatggtgggggcgctggctgcccagtccctgggcgagccggccactcag
atgaccctgaacaccttccactacgccggtgtctcggccaagaacgtgacgctgggcgtg
ccccgactcaaggagctgatcaacatctccaagaaacccaagacgccctcgctgaccgtc
ttcctgctggggcagtctgcccgagatgccgagagggccaaggacatcctttgccgcctg
gagcacacgaccctccgcaaggtgaccgccaacaccgccatctactacgaccccaacccg
cagaacacggtggtggccgaggaccaggagtgggtgaacgtctactacgagatgcccgac
tttgacgtgacccgcatttccccctggctgctgcgcgtggagctggaccgcaagcacatg
accgaccgcaagctcaccatggagcagattgccgagaagatcaatgctggctttggggat
gacctcaactgcattttcaacgacgacaacgcggagaagttggtgctgcggatccggatc
atgaacagcgatgagaataagatgcaagaggaggaggaagttgtggacaagatggatgac
gacgtcttcctccgctgcattgagtctaacatgctgacggacatgacgctgcagggtatc
gagcagatcagcaaggtctacatgcacctgccccagacggacaacaagaagaagatcata
attacagaggacggggagttcaaggccttgcaggagtggattctggagacggacggcgtg
agcctcatgcgggtgctgagtgagaaggacgtggaccccgtgcgcacgacctccaacgac
attgtggagatcttcacggtgctgggcatcgaggccgtcaggaaggccctggagagggag
ctgtaccacgtcatctccttcgacggctcctacgtcaactaccgccacttggcgctgctg
tgcgacaccatgacgtgccgcggccacttgatggccatcacccggcacggcgtcaaccgc
caagacacggggcccctcatgaagtgctccttcgaagagacggttgacgtgctgatggaa
gcggccgcccacggggaaagtgaccctatgaagggcgtctcggagaacatcatgctgggc
cagctggcgccggcaggcaccggctgcttcgacctcctcttggacgccgagaagtgcaaa
tacggcatggagatccccaccaacatcccggggctcggcgtggggggacctactggcatg
ttctttgggtctgctcccagccccatgggtggaatgtcgcccgccatgaccccctggaac
caaggcgccacgccagcatatgtggcatggtctcctagcgttggtagcggaatgactccg
ggggcagccggcttttcacccagcgccgcctccgacgccagcggcttcagccccggctat
tctccagcctggtcgcccaccccagggtccccggggtctccaggaccctccagcccgtac
atcccatcgccaggtggggctatgtctcccagctactccccgacctctcctgcctatgag
cctcgttccccaggagcgtacacaccgcagagccccagctacagccccacatcgccttcc
tacagcccaacctctccgtcatactcccccaccagccccaattacagccccaccagcccc
agctacagccccacgtcgcccagttactctccaactagccccagctacagccccacgtcg
cccagctacagccccaccagccccagctacagccccacgtcgcctagctattctccaacc
agccccagctacagccctacatcgcccagttactctccgaccagccccagctacagcccc
acgtcccctagctattctccgactagccccagctacagccccacgtcccccagttactct
ccgaccagccccagctacagccccacgtcgcccagctacagcccaacatcgcccagctac
tctccgaccagccccaactacagcccgacgtctccaaactacaccccgacttcgcccagc
tacagccccacctcgcccagctacagccccacgtctccgaactacaccccgacgtctcca
aactacagccccacttcgcccagctactctccgaccagcccctcctacagccccacctcc
cccagctactccccctccagcccccgttacaccccgcagtcgccgacgtacaccccctcg
tcgcccagctacagccccagctcgcccagctacagccccaccagccccaagtacacccca
accagcccgtcctacagccccagctccccggagtacaccccaaccagccccaagtacagc
cccacctcgcccaagtacagcccgacatcgcccaagtacagcccgacatcgcccacctac
agccccaccacccccaagtacagccccaccagccccacctactcgcccacctcgcccgtc
tacaccccgacctcgcccaagtacagccctacatcgcccacctactcgcccacctccccg
aagtacagcccgacatcgcccacctactcgcccacctccccgaagggctccacctactcg
cccacctcccccggctacagccccacgtcgcccacctacagcctcaccagcccggccatc
agcccagacgacagcgacgaggacaactga
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integrated database retrieval system
