Zootoca vivipara (common lizard): 118094413
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Entry
118094413 CDS
T07275
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118094413 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
118094413 (ACIN1)
03015 mRNA surveillance pathway
118094413 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118094413 (ACIN1)
03041 Spliceosome [BR:
zvi03041
]
118094413 (ACIN1)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118094413 (ACIN1)
Spliceosome [BR:
zvi03041
]
Complex C
Other components
EJC/TREX
118094413 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
118094413
NCBI-ProteinID:
XP_034990675
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Position
LG13:42219270..42254620
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AA seq
1234 aa
AA seq
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MADGEEVTLDGKPLQALRVADLKAALEQRGLAKSGQKSALIKRLRGALMLENLQKHSTPH
TTFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAADSESKSCIVSREREESDE
EGPGRPEQHPTRVRQARAVKTPGAAHAPSSEERETPLRSRRAAQRAPVKEEEEEEEEDDE
EDDDEEDEEEEEEAAALPAKQTPKGQAEPAAPAPLEKGACQPSLPITPQAQPKEATAKTP
DAPGCGAAVPLLPPSKGLAEAEPTAPECREEQTATVTQAEPQEEKRGPEMPGLPEEAQPA
EAAAQLPEALKVEGPCPEERGPTAPHEAQREQGVVLRGWGVPLQPQQVVAEEIQRDEDQE
EAAEALKTLEEETAAAAAALVQASPSPPQLTEAQHAQQDDGGEEPPPPLLTKEAPGPSPA
EDEEPPPQLSQPSPPAQEVPAAASPGPPEEQPSHPPSPLQRPRERPAGSSSSRSSSSASS
SSRSRSRGSSQPRSRTRRPRSGSSESPARKRRASGSPSRSGSERHSSSCSRSRSRSRSRS
PSSSGSSRKSRSPEASRDGTSYPHTKEPSPTGESPPRHSPPSQQDGSSSPREERRNTLPL
PSDPQRHPSHGQEQEQQEEEEMEMTVPERGSPEPPTPMEASGLDSGVPASEPHRPSEQRH
SENEEKQEVPMEPSEPRTESEAPEPGPDEHPSAEPPGPEPGPEDEEKKEGSTQPKAFKRK
ISVVSSSVAKGTAAATNSDTEGGQPGGRKRRWGASTAATQKKPSISITTESLKSLIPEIK
PPTGGQEAVVDLHADDSRISEDEAERHPEEPPHEKALKICRTVTQVVPAEGQENGQGEEE
EEEEKAHEEELPEAPPAVAVEAVVLPPPVEHEVKKVTLSDTLTRRSISQQRSGVSITIDD
PVRTAQVPSPPRGKVSSIVHICNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCYVT
YSTVEEAVATRNALHGVKWPQSNPKFLSADFAEQDELDFHRGLLAERPAEAKADEALSLP
GVGLGMRGEREMPRRSEAREREAVVREQWAEREREMERRERTRAEREWDRDKVREGPRSR
SRSRERRRKERPKSKEKKAEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDTQYVQK
QAERAARARERERRRKEQEAEEARQRERSRQAEREKRREHSRERERERPNATGGGASSRG
GERGGRDRERREAKARHSRSRSRSTPVQDRGGRR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggaggaggttactctggacgggaagccgctccaggcgttgagggtcgcc
gacctgaaggcggctctggagcagcgcggcctggcgaagagcgggcagaagagcgcgttg
atcaagcgcctccgcggggccctgatgctcgaaaacctccagaagcactcaacccctcac
accaccttccaacccaattcccagattggcgaggagatgagtcaaaacagcttcatcaaa
cagtacctggaaaagcagcaggagttgctgaggcaacgtttggaacgggaagctcgggaa
gccgcggattcagagagcaaaagctgcattgtgtcacgggagagggaagaatctgacgaa
gaagggccaggaagaccggagcagcacccgacccgagtcaggcaggccagagctgtaaag
acccccggagctgcccatgccccaagcagcgaagaacgagagacgcctctccggagtcgg
agggcagcccagagggctcctgtgaaagaggaggaagaagaggaggaggaggacgacgaa
gaggacgatgatgaggaggacgaggaggaggaagaggaagctgctgcattgccggccaaa
cagacgccgaaggggcaagctgagcccgccgccccagctcccctggagaagggtgcatgc
cagccttccctgcccattaccccgcaggctcagccaaaagaggccacggccaaaaccccg
gatgccccagggtgtggagcggccgtgccacttctcccaccctcaaagggcctagcggag
gctgaacccacagccccggagtgcagggaagagcagacagcaactgtgacacaggcggaa
ccccaggaggaaaagaggggccctgagatgccagggcttccggaagaggcacagcctgct
gaggccgcagcccagctacctgaagccttaaaggtggaggggccttgcccggaggagaga
gggccgactgccccccacgaggcacaaagggagcagggggtggtcctgcgggggtggggg
gtccctctgcagccgcagcaggtggtggcagaggagatccagagagacgaggatcaggag
gaagcggccgaggccctgaagactctggaggaagagacggcagctgctgctgccgccctg
gtccaggcctccccttcccctccacagctgacggaagcacaacacgcccagcaggatgac
gggggcgaggagccccctccccctctcttgaccaaggaggcccccgggcccagccctgca
gaagacgaagagcccccccctcaactctctcagccatctccccccgctcaggaagtccca
gccgccgccagccccggccccccagaggaacagcccagccacccgccatctcccctgcag
cgcccgcgggaaaggcccgcaggctccagctcctcacgctcttcctcgtcggcgtccagc
tcctccaggtcccgctctcgcggcagctcgcagcctcgctcccgcaccaggaggccccgc
tccggctcctccgagtcgcctgccaggaagcggcgggcctcggggtccccgtcccgctct
ggctccgagcggcacagcagctcctgctccaggtctcgctccaggtcgcggtcccggtcg
ccttccagcagcggcagcagcagaaagtcccgtagccctgaagcctcaagggacggtacc
agctacccccacaccaaagagccctccccaacaggggagagccccccacgccacagcccc
ccgtcccagcaagatgggtcatcaagcccaagggaagagcgaagaaacacccttcccctg
ccgtcggacccccagagacaccccagccatggccaggagcaggaacagcaggaagaggag
gagatggagatgacagttccagagcgaggcagcccagagccccccactccaatggaggcc
agtggcctcgacagcggggtccctgcctcggagccacaccgcccatctgaacagcggcac
agcgaaaatgaggagaagcaagaggtgcccatggagccgtccgagccccgaacagagagc
gaggcccctgagcctggccctgacgaacacccctctgcggagccccccggacccgaacca
ggccccgaagacgaggagaagaaagagggttcaactcagcccaaggccttcaagaggaag
atatctgttgtctcgtcatcggtggccaaaggcacagcggcagcaacaaacagtgacaca
gagggagggcagccaggaggccggaagcggcgctggggggccagcacagccgccacgcag
aagaaaccttccatcagcatcaccacagagtccctcaagagcctgatccctgagatcaag
ccaccgacgggagggcaggaggcagtggtggacctgcacgccgacgactcgcgcatctct
gaagatgaggccgagcggcacccggaggagcccccccacgagaaagccctcaagatctgc
cgcaccgtcacacaggtggtgccggctgaaggtcaagagaacggccaaggagaggaggag
gaagaggaggagaaggcgcacgaggaagagctgcccgaggcccctcccgctgtcgccgta
gaggcagtcgtgctgccgccacccgtggagcacgaagtgaaaaaagttacgctgagcgac
actctgacgcggcgctccatcagccagcagcgctctggcgtctccatcaccatcgacgac
cctgtccgcacagcccaggtcccctctccgccccgcggtaaagtcagcagcatcgtccac
atctgcaacctggtgagacccttcactctcgggcagctgaaggagctgctgggccggaca
ggcaccctcgtggaggaagccttctggatcgacaagatcaagtcccactgctacgtcaca
tattcaacagtggaagaagcggtagcaactcgcaacgccctccatggtgtcaagtggcca
caatcaaaccccaaattcttatcagcagactttgcagagcaagatgagctggatttccac
cggggtctgctggccgagcgtcccgcagaagccaaggcggacgaggcgctctccctccct
ggggtgggcctgggcatgcggggggagcgcgagatgccgcggcgctcggaggcacgagag
cgggaggcggtggtccgggagcagtgggccgagagggagagagagatggagcggcgggag
aggacgagggccgagcgggagtgggaccgggacaaggtgcgcgaggggccccgctctcga
tcccggtcccgggagagacgccgcaaggagcgccccaagtctaaggagaagaaagccgag
aagaaggaaaaggcccaggaagagccccccgctaaactgctggacgaccttttccgcaaa
accaaagcagccccctgcatttattggcttcctctgacagacacccagtacgttcagaag
caggccgagcgggcagccagggcccgggagcgagagcgccggcgcaaggagcaggaggcg
gaggaggcccgccagagggagcgcagccgacaagccgagcgggagaagaggcgggagcac
agccgggagcgcgaacgggagcgccccaacgccacaggaggcggggccagcagcagaggg
ggcgagcgcggtggccgggaccgcgagcggcgcgaggcaaaggcccgccatagtcggagc
cggagtcgcagcacgcctgtacaggacaggggggggcgccgctga
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