Zootoca vivipara (common lizard): 118096083
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Entry
118096083 CDS
T07275
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118096083 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zvi04990
]
118096083 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
zvi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118096083 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118096083
NCBI-ProteinID:
XP_034993208
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All DBs
Position
LG14:complement(20103785..20251060)
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AA seq
717 aa
AA seq
DB search
MSYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDGM
THLEAQNKIKSASYNLSLTLQKSKRPAPVPTATPRIDSPMPVIPHQKVIANTVANTEYVE
RFNPNVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGGE
LAGESPLASLPVKDPHVDSASPVYQAVLKTQNKPEDELDDWSRRSSHLQSRSFRILAQMT
GTEYMQDPDEDALRRSSGKENVAGSPENSTAGTAHDAQYATSSVWHCPKSCSTDANTDRA
GAMASKGSVRFGTGTSQREASCHSAGQTVPRASSSNQSTPVEHAPVSTSCAPSAVSPASA
SQPSAAAHSAAHQMTLSSASATSMGHDSISSSCQRGPGQSYTSAPASHSPAPYSGYSEAP
APASKPRVVTTASIRPSVYQPAAPAPAPMPVHTQAPSQAEPSSRPPWVTDDSFSQKFAPG
KSTTTVTKHILPRGAPVPPPPASAPTYPPPSIPASSQAPAVARGTIQRAERFPASSRTPL
CGHCNSIIRGPFLVAMGRSWHPEEFYCAYCKASLADVGFVEEQNSVYCERCYEQFFAPTC
ARCHTKIMGEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYVALFSTKCH
GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgactctcaacggacctggaccatgggggttccgactgcaagggggc
aaggacttcaatatgcctctgaccatctccagaattacgccaggcagcaaggcagctcag
tcccagatgaaccagggggacttggtggtagcaattgatggagtcaacacagatggcatg
acccacctagaggcccagaacaagataaaatcagccagctacaacctgtctcttactctt
caaaaatcaaaacgtcctgctccagttcctacagccaccccaagaattgactccccaatg
cctgtaatccctcatcaaaaggtcatagcgaacactgttgccaacacagagtacgtggag
cgcttcaaccccaacgtcctgaaggattctgctctgtctacacacaaacccattgaggtg
aaagggcctggtggcaaggccaccatcattcacgcccagtataacaccccaataagcatg
tattctcaagatgctatcatggatgccattgcaggccaggcccaggcgcaaggtggtgaa
cttgctggtgaatctccactggctagcctccctgttaaagatcctcatgtagacagtgcc
tctccagtgtatcaggctgtgcttaaaactcagaacaagcctgaagatgagcttgatgat
tggagtcgccgttcttcccacttgcagtccaggtccttccgcatcctggctcagatgaca
ggaactgagtacatgcaagatccagatgaagatgccctgaggagatcaagtggcaaggaa
aatgttgctggatctcctgaaaacagcactgcaggtactgctcacgatgcacagtatgcg
acgtcaagtgtttggcattgccctaagtcttgcagcacagatgccaacactgacagagct
ggagcaatggcctccaaagggtccgtgagatttgggactggtacaagtcagagggaagcc
agctgccacagtgctggccagacagtccctcgtgcttcctccagtaaccaaagtacccct
gttgagcatgcgccagtgtctaccagctgcgccccttctgctgtgtcgcctgcttcagcc
agtcagccctctgctgccgctcacagtgccgctcatcagatgaccctgtcgtccgcctcg
gccacttccatggggcacgactccatctcgtcttcttgccaaagaggcccaggccaatct
tacacatcagctccagcttcccacagccctgctccttactcaggctacagcgaagccccg
gctcctgcctcaaagcccagagttgtcactactgccagcatcaggccttcggtctatcag
ccagcagctccggcgccagccccaatgcctgtacacacccaagctccaagccaagcggag
ccttcaagccgccctccctgggtcacggacgactccttctcccagaagtttgctccgggg
aaaagcaccaccactgtcaccaagcatatcctgccacggggggctccggtgccacccccg
ccagcctcggcccccacgtacccacctccttccatcccggcctcttcccaggctccggca
gttgcccggggaacgattcagagggctgagcgcttcccagccagcagccggactccactg
tgcggacactgtaatagcatcatcaggggtcctttcctggtagccatgggtcgttcttgg
catcccgaggaattctactgcgcttactgcaaggcatccctggctgacgtcggctttgtt
gaggagcagaacagtgtgtactgtgagcgttgctatgagcaattctttgcccctacctgt
gccagatgccacactaagatcatgggggaagtgatgcatgcccttcggcagacttggcac
acaacttgctttgtctgtgctgcctgcaggaagccatttgggaatagcctcttccatatg
gaggatggagagccctactgtgagaaagactatgtggccttgttcagcaccaaatgccat
ggatgcgacttccctgtcgaagcaggagacaagttcatcgaagcccttggacacacttgg
catgacacctgtttcatttgtgctgtgtgccatgtgaatttggaaggccagccattttat
tcaaagaaggataagccgctatgcaagaagcatgcacacgctatcaacgtctaa
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