Zootoca vivipara (common lizard): 118096140
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Entry
118096140 CDS
T07275
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zvi03009
]
118096140
03036 Chromosome and associated proteins [BR:
zvi03036
]
118096140
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118096140
Ribosome biogenesis [BR:
zvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
118096140
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118096140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
118096140
NCBI-ProteinID:
XP_034993393
LinkDB
All DBs
Position
LG14:25685628..25699201
Genome browser
AA seq
802 aa
AA seq
DB search
MGCLGRYLTQHCARSPALQALGLVRSRALPSRATSDRSASSAPTLHSPCWRGWAWPRAAS
RSQAPPRFLVSSAAGAGLFPFAPASALSSRFCHHLSGEESQEMPAAPRPDYESEDEMEPR
TPMDAEVALEGSGKKRKKDKKDKSKKHKMKIQETPTEENELSDAELEPPKPKKIKKKKEV
FDDIEDIIAEHNTTSSATNGVGNSKKKGNVEESNTECESDQDQELTEEQKEGDFANFNLS
KATIDLLKARGVTYLFPVQVKTYKHISDGKDVIAQARTGTGKTFSFAIPLIEKLQGDSQE
RKRGRTPKVLVLTPTRELAMQVARDFKDVTRKLTVACFYGGTAYNGQLDLMRNGIDILVG
TPGRIKDHLQNNKLDISNLKHVVLDEVDQMLDMGFAEQVEEILAYAYKKDSEDNPQTLLF
SATCPHWVYDVAKKYMKSKYEQIDLIGKRTQKTAMTVEHLAIECHWSQRAAVIGDVIQVY
SGSHGRTIIFCETKKEATELALNASIKQDAQSLHGDIPQKQREVTLKGFRNGSFGVLVAT
NVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGMCICFYQRKEDHQLRQVEQ
KAGITFKRVGVPTATDIIKASSKDAIRSLDSVPPSAIDHFRQAAERLIEEKGAVEALAAA
LAHISGATSIEQRSLLNSDAGFVTMTLQCSVEMHTIGYAWRGLKEQLGEDIDSKVSRMRF
LKGKTGVCFDIPVAELNKVQQTWQDTRRWQLSVATELPELEESRDSGRGGGSDFRNGRRG
GGSNRHDRFRNRGQKRSHSRAF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctcggccgctacctcacgcagcactgcgcccgctcgccggccctgcaggct
ttgggtctcgtccgctcccgggctttgccctcccgcgccaccagcgaccgctcggcttcc
tcagcccccacgcttcactccccctgttggcggggctgggcctggcctagagccgcctct
cgcagccaagcgccgcctcgctttctcgtcagcagcgccgccggggcggggctctttcct
ttcgccccggcgtcggctttgagcagccgcttttgccaccacctcagcggagaagagtcc
caggaaatgcccgcagccccccggccagactacgagagcgaggacgagatggagccccgc
accccgatggacgctgaggtcgccctagagggcagcggcaagaagcgcaagaaggataaa
aaagataaatctaaaaagcataaaatgaaaattcaagaaacaccaacagaggagaatgaa
ctgtctgatgcagaattggaaccacccaaaccaaagaaaattaagaaaaagaaagaagtt
tttgatgacattgaagacataattgcagaacacaatacaacatcctccgccactaatgga
gttggcaactcaaaaaagaagggtaatgttgaagaatcaaatacggaatgtgagagtgac
caagatcaggaattgactgaagagcaaaaggaaggagactttgccaactttaatctctct
aaagcaactattgaccttctcaaagctcgtggagttacctacctgtttccagttcaagta
aagacttacaagcatatttctgatggcaaagatgtgatagcccaagctcggactggaact
gggaaaaccttctcttttgccattcctttaattgaaaaacttcagggagattcccaggaa
agaaaaagaggccgcacaccaaaggttctggtcctcactccaaccagagagttggcgatg
caagtagccagagacttcaaagatgtcacaaggaaactcactgtggcttgcttctatgga
ggaacagcatacaatggacaacttgatcttatgcgtaatggcatcgacatcctggttggg
acaccaggtcgaattaaagaccatcttcaaaataacaaattggacatttccaatctaaag
catgttgtcctggatgaagttgaccagatgttagacatgggatttgcggaacaagtagag
gaaattttagcatatgcttataagaaagattctgaagacaatccacagacattactcttt
tctgcaacttgcccacattgggtttatgatgtagcaaagaaatacatgaaatctaaatat
gagcaaattgatcttattggaaagaggactcaaaagactgcaatgactgtagaacatttg
gctattgaatgtcattggtcccagagagctgcagtcattggagacgttattcaagtctac
agtggtagtcatggacgtaccatcatattttgtgagaccaaaaaagaagcaactgaactg
gccctgaatgcctcaataaaacaggatgcacagtctttacatggtgatattccacaaaag
cagagagaagttacactgaaaggctttcgcaatggatcatttggagttctggttgcaacc
aatgtagctgcccgaggtttagatatcccagaggttgatctggtaatacaaagttcacca
ccaaaggatgtagagtcctatattcatcgttctgggcgcacaggtcgagctggccgaact
gggatgtgcatctgtttctatcagcgcaaggaagatcatcagctgagacaagtagaacaa
aaagcggggattacatttaaacgcgtgggtgttcctacagcaacagacattattaaggct
tccagtaaagatgctatcagatctttggattccgttcctccatctgccattgaccacttc
agacaggcagctgaacggctgatagaggaaaagggggcagtggaagctctggctgctgca
ctggctcatatttctggagctacttccattgaacagcgttctttgctcaactcggatgcg
ggttttgtgaccatgacacttcagtgttcagtagaaatgcacaccattggctatgcttgg
cgaggtctgaaagaacagctgggtgaggacattgacagcaaagtgtcccgaatgcgcttt
cttaaggggaagacgggtgtgtgctttgatattcctgtagctgaactaaataaagtacag
caaacatggcaagatacaagacgctggcaactttctgtggcaacggaattgcccgagctt
gaagaatcgcgtgacagcggccgaggtggtggctcggatttcaggaatggaaggcgaggt
ggcggctccaacaggcatgacagattcagaaacaggggccaaaaaagaagccatagccgg
gctttttga
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