Zootoca vivipara (common lizard): 118096403
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Entry
118096403 CDS
T07275
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118096403 (ZSWIM8)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
118096403 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
118096403
NCBI-ProteinID:
XP_034994062
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All DBs
Position
LG14:12295576..12350978
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AA seq
1865 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPHRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSNADKKNSFCWVKAIQQRNCRPQCGETTCEVGRAHGLDVSGTCLQLGDRSRPA
SQEPAVRPKELIGKRKVVTEGPQRVLRRLSAEGDKAAYKTAVNKGGKLPVGKTLASKHSG
KRRMSSEDSSLEPDLAELALDDSSLALGAEASNTFSFTDSPLSRSYRDTFEDDGGVYFAE
ATEPTLRSSPSSKKNPKDPVGEVGSGDDDIPCPDESTGGVSLKPKEVGENGAAGGGGEEE
EDDYQVYYLNPQEVAKEEDDKAEGGVEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELAKDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERQEYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGSNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHATQSAAPIQHLPGTTVTQQAGVTTAVQSNTSEPFLE
KSSQDNPQRSPCDPPMEPSVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTAKDSK
HNASINMWHGYIQNTVYSSGHPIKTKIGMASIDSSAPETTSDSSPTLSRRPLRGGWAATS
WGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAKTVEVGRYKGRRPESHAPHVPNQPS
EAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNF
VSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDSNM
VRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACLAVEEAAKGGGVYPEVLF
EVAHQWYWLYEQTVGGTLAQREGATGCSASGARASCEAVRGLADTRVTSEPTTVTVAAAV
TAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGLHPYTTLQTHIPCNPQYIGHPIQHMP
RPAVFPVPGSAYPQAGLPCPLPLQGVHPAFIGAQYPYSVTTPSLAATAVSFPGVPVPSMT
QIAVHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGTSLTSLSSQPSSLVTGGFPSEDEQH
SQPAGNQGVHHLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAAKLGV
NYVHQFCLGAAKGVLSPFVLQEIIMESLQRLNPAHVHNHLRTPAFHQLVQRCQQAYIQYI
HHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKDLWQRVSLEM
TTFSP
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggggaaaggttttcatttgaagattctgac
cgctttgaagaagactccctttgttccttcatctctgaggcggagagcttatgccagaat
tggagaggatggcggaagcaatcagctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccgctggtggagctgtctgcaaaacaggtggcatttcacattccattt
gaagtggttgagaaagtctacccacctgtgcccgaacaactgcagcttcgtattgccttt
tggagcttcccagaaaatgaagaggacatcaggctttactcttgcttggcaaatggcagt
gcagatgagttccagagaggcgagcaactcttccgaatgagggctgttaaagatccactg
cagataggtttccatctgagtgccacagtggtacctccccagatggtaccaccaaaagga
gcatacaatgtggccgtgatgtttgacagatgcagaatcacttcatgcagctgcacttgt
ggagctggggccaaatggtgtgcccatgttgtagccctttgccttttccggatacacaat
gcatctgcagtgtgtttgcgagcacctgtctcagaatccctgtctcgactgcagagagat
cagctgcagaaatttgcacagtacctcatcagtgaacttccccagcagatccttcctact
gctcagcgcttgctggatgagttgctgtcttctcagtccactgctatcaatactgtatgt
ggagccccagatcccactgccggtccctctgcctcagatcaaagcacctggtacttggat
gaatctacattaagtgacaacataaagaaaacccttcacaaattttgtggtccatctcct
gttgtctttagtgacgtgaactctatgtacctttcttccacggaacccccagctgccgcc
gaatgggcctgtctcttgcgacctctgagggggagggagccggagggcatctggaaccta
ctttctattgttcgcgagatgttcaagagacgggataccaatgcggcccctctgctagaa
attctaacagaccagtgcctgacctacgaacagataaccggctggtggtacagtgttagg
acatctgcatcccatagcagtgcaagtgggcacactggccgtagcaacggccagtcagaa
gtggctgctcatgcttgtgcgagcatgtgcgatgagatggtggttctctggaggcttgct
gtcttggatccaaccatcagccctcatcggcggagggatttgtgcacacagctgaggcag
tggcaattgaaggtaatagacaacgtcaaaaggggacagcacaaaaaatccctcgagaaa
ctgttccaggggttcaagccagctgtggaagcttgctacttcaactgggaggaggcctat
ccaattccaggcatcacgtacagcaatgctgacaagaagaactccttttgttgggtaaag
gctatccaacagcgaaactgccgaccgcagtgtggagaaaccacctgtgaggtggggaga
gctcatggtctggatgtttcggggacgtgcttgcaactaggggatcggtcgcgccctgcc
tctcaggagcctgctgtgcgccccaaagaactcattgggaagcggaaagtagtgactgaa
ggtccccagcgggttctgagaagactttcagccgaaggcgataaagctgcatacaagacg
gctgtgaacaagggtggcaagcttccagtgggaaagaccttggccagcaaacatagcggg
aagcgtcgcatgagcagcgaggacagctctctggaaccagacttggccgagttggcttta
gatgacagcagtttggcccttggcgctgaggctagcaacacgttcagcttcacagacagc
ccgttgagcagaagttacagggatacctttgaggacgatggtggggtgtatttcgcagag
gcaactgagcccaccctcaggagtagtccatccagcaagaagaacccaaaggacccagtg
ggggaagtgggtagtggagacgatgacattccttgtcctgatgaaagtactggtggggtg
agtttgaagcccaaggaagtgggggagaatggtgctgctggaggaggaggagaggaggag
gaagacgactaccaggtgtactatctgaatccccaggaggttgctaaggaagaagatgac
aaagctgagggaggggtagaagaagaacaagacatatttgctgggataaagcccttggag
caggaaaaccgcatggagatcctgtttgcttgtgcggaagctctctatgcacatggttac
agcaatgaagcctgtcgcctcacagttgagcttgccaaggacttgttggccaaccctcct
gatctcaaagtggaacagcccccaaccaagggaaagaaaaacaaggtatccaccagcaag
cagacatggatggcaacaaacaccttatccaaagctgctttcctgctgactgtgctgagt
gaacggcaggaataccacaatctagctttccagattggcatgtttgctctggagctgcag
aggccgccagcctctaccaaggctttggaggtaaagctggcatatcaggagtctgaaatt
gtggccttgttgaagaaaattccgcttggctctaatgagatgaacactattcggggaaga
gctgaagagctgagagaaggaaccctgtgtgattaccgccctgtcttgccgcttatgctg
gccagcttcatatttgatgtcttatgcacaccagtggtttctcctacaggatccagacct
ccaagccgtaattggaataatgaaatgcctggagatgaggagctaggttttgaggcagct
gtggctgctcttgggatgaagacgacagtgagtgaagcagagcaccctcttttgtgtgaa
ggcacccgaagggagaagggagatctcgctctagccctgatgatcacttacaaggatgac
cagtctaagctaaaaaaaatcttggataagctgctggacagggagagccaaacacacaag
cctcagactctaagttcattctactcgtccagcaagcccacagtagccaatcagaaatct
ccttccaaacatgctacccaatcagctgcgcccattcagcacctcccaggaacaaccgtc
acgcaacaagcaggggtaaccactgctgtccagagcaacacttcagaaccctttttggaa
aagagctcccaagataaccctcagagatccccttgtgacccacctatggaacccagtgtc
ttaaagcaagaagggaaagttcctagcagactagcccttggaaatagaggtggctacaat
gggaggtgctggggttccccagtcagacaaaaaaagaagcacacagcgaaggacagcaag
cataatgccagtataaatatgtggcatggctacatacagaatactgtgtacagttctggt
caccccatcaaaacaaaaataggaatggccagcattgacagcagtgctccagaaaccacc
tcggacagttctccaaccctcagcaggcggcctctgcggggaggatgggcagccacttcc
tggggcagagggcaggacagcgatagcatcagtagctcttccagcgactccctgggctca
tcctcctccagtggaagcaggagagctagtggaggagcacgtgcaaagacggtggaggtc
ggcaggtataagggcaggcgtccagagagccatgctcctcatgtcccaaatcagccctca
gaagcagctgcacatttctattttgagctggccaagacagttctcatcaaggcaggtgga
aacagcagtacttccattttcacccacccatcctctagtggtgggcaccagggtcctcat
cgcaacctccacctctgcgcctttgagattggtctctatgcactggggttgcacaacttt
gtctctcccaactggctgtctcgaacctattcctcccacgtctcttggattacagggcaa
gccatggagattggcagtgcggccttgaacatcctcgtggagtgctgggatgggcacctg
acccctccggaggtggcgtccctggctgacagggcttccagagctagggattccaacatg
gtgcgagcagccgctgagctggcattgagctgcttgccgcacgcccatgccttgaaccca
aacgagatccagagagccctggtccagtgcaaggagcaggataatctaatgctggagaag
gcatgcttggcagtggaggaggcagccaaaggaggtggtgtttaccctgaagtcctgttt
gaagttgctcaccagtggtactggttgtacgaacaaactgttggcggaactcttgctcag
agagagggagccacaggctgcagtgcaagtggagcccgggcatcctgcgaagcggtgcgt
ggactggcagataccagagtgacgtcagaacccaccacagtgactgtcgcagctgcggtg
acagcagcagcaacggtggtgcccgtaatttcggtggggtcgacaatctaccagcagcac
accatggcgggcccagcaatggcacatgcacacacccaggggctgcacccttatacaaca
ctccagacccacatcccttgcaatcctcagtatattggacaccctatccagcacatgcca
cgcccggcggtctttcctgttcctggctcagcttatccccaagcagggttaccctgtcct
cttcctttgcagggtgtccacccagcattcattggcgcacagtacccgtactcggtcact
accccgtctctggcagctacagcagtgtccttcccgggagtgcctgtcccatccatgacg
cagattgctgtgcatccataccatgctgagactgggctgtctctgtcttccaatgtagca
ataggaagtgttcatgcagggtctacattcccagcaattcaagggacttccttgacgagt
ctgtcttctcagcccagctcccttgtcacaggaggctttccttctgaggatgagcagcac
agccagcctgcaggcaatcaaggcgtgcatcacctccactctgcctaccgagttggaatg
ttagcgctggagatgcttgggcgcagagctcacaatgaccaccccaacaacttctcacgc
agcccaccctacacagaagatgtgaaatggctcctgggattagctgccaaattaggtgtc
aactatgtgcatcaattctgtcttggtgcagccaagggggtcctgagcccttttgtgttg
caagagatcatcatggaatccctgcagaggctcaatcctgcccatgtccacaatcacctg
cgcacaccagccttccaccagttggtacagaggtgccagcaggcatacatacagtacatc
caccaccggctgatccaccttactccggcagactacgatgactttgtgaatgccattcgc
agtgccagaagcgccttctgcctaacccctatgggcatgatgcaattcaatgacatcctt
cagaacctgaagcgcagcaagcagactaaggatttgtggcaaagggtctctttggaaatg
accaccttttcaccatga
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integrated database retrieval system
