Zootoca vivipara (common lizard): 118096424
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Entry
118096424 CDS
T07275
Symbol
SAMM50
Name
(RefSeq) sorting and assembly machinery component 50 homolog isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118096424 (SAMM50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
zvi03029
]
118096424 (SAMM50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zvi02000
]
118096424 (SAMM50)
Mitochondrial biogenesis [BR:
zvi03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
118096424 (SAMM50)
Transporters [BR:
zvi02000
]
Other transporters
Pores ion channels [TC:
1
]
118096424 (SAMM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
118096424
NCBI-ProteinID:
XP_034994131
LinkDB
All DBs
Position
LG14:complement(3732895..3752394)
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AA seq
482 aa
AA seq
DB search
MGRHIHRFWEHSCTRLHPFMSLEPLPMSGPDFGAIGEEAELVEVEPETKQEILENKDVVV
QHVHFDGLGRTKDDIIMYEIGDVFKAKDLIDVMRKSHEAREKLLRLGIFRQVDVLIDTCQ
GDDALPNGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNIFGRAEKVTFQFSYGT
KETSYGLSFFKPQPGHFERNFSLNLYKVTGQFPWSSLRETDRGISTEFNFPIWKTNHTLK
WEGVWRELGCLARTASFSVREESGHSLKSSVSHAMVIDSRNSTILPRRGALLKINQELAG
YTGGDVSFLKEDFELQFNKKLLWDSVLSASLWGGMLVPIGDKPSSIADRFYLGGPTSVRG
FSMYSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNY
GEGPKAHLRKLAECIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIR
FL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggggagacacatacatagattctgggaacacagctgcacaagactgcatccttttatg
agtttggagcctcttccaatgagcggacctgattttggtgctataggggaagaagctgaa
ctggttgaagttgaaccagaaaccaaacaggaaatactggaaaataaagatgttgtggtt
caacatgttcactttgatggacttgggaggactaaagatgacattatcatgtacgaaatt
ggtgatgtattcaaggctaaagacctcattgatgttatgaggaagtcccatgaagctcgt
gaaaagctcctccgtctaggaatttttagacaggtggatgttctaattgatacgtgtcaa
ggagatgatgcccttccaaatggtttagatgtaacatttgaagtaacagaactgagaaga
ttaactggaagttataatactatggttggcaataatgaagggagcatggtactcggactc
aaactcccgaatatatttggacgtgccgagaaggtgacatttcagttctcctatggcaca
aaggaaacgtcatatggcctctctttcttcaaaccacagcctggtcacttcgaaagaaac
ttttctctcaatctgtataaagtaactggacaatttccttggagttctcttcgtgaaact
gatagaggaatatcaacagaattcaatttccccatatggaagaccaaccacacgctaaaa
tgggagggtgtctggagggagctcggctgtcttgcaagaacagcatcattttctgtccga
gaagaaagtggacattcactcaagtcgtctgtgtctcacgctatggtaattgattctcgt
aactctacaatcttgccgagacgaggtgctttgctgaaaataaaccaggagttggctggc
tataccggtggtgatgtgagttttctgaaagaggactttgaacttcagtttaataagaag
ctcttgtgggattcagttttatcagcttctctttggggtggaatgttggttcctattgga
gacaaaccatcaagtattgctgatagattttatcttggcggaccaacaagtgtgcgtgga
ttcagtatgtacagcattggaccacagagtgaaggggattacctgggaggtgaagcttac
tgggctggaggtctgcatttgtacactcctctcccttttcggccgggccggggaggattc
ggagatctattcagaacacacttctttctcaatgctggcaacctctgcaatcttaattat
ggtgaaggtcctaaggctcatcttcgtaaactagcagagtgcatccggtggtcttacggt
gctggaatagttctcagacttggaaacattgctcgattagaactcaattattgtatccca
atgggagtacaaagtggggacagaatatgtgatggagttcagtttggagctggaataaga
ttcttgtaa
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