Zootoca vivipara (common lizard): 118096749
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Entry
118096749 CDS
T07275
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118096749 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118096749 (LIG3)
Enzymes [BR:
zvi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118096749 (LIG3)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
118096749 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
DUF4476
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
118096749
NCBI-ProteinID:
XP_034994757
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All DBs
Position
LG15:complement(14437244..14462970)
Genome browser
AA seq
997 aa
AA seq
DB search
MPFLLRVHLLKAAKTLSRSEKTSLLSAQTAQTRAGHSFQKIVAFRRCSWLWSSSSTPSPA
GWWYQLCIFRGFLFPAPLPVWPSKPLCTVSEMAEQRYCVDYAKRGTAGCKKCKEKILKGM
VRIGKVVPNPFSESGGDMKEWYHIKCIFEKLERARATTKKIEDITDLEGWEELQDSEKEL
INQHISDLTSKPANTPKKKSTVQAKISPGGQITSPKKMPAASSDPSPKKFSGFTAKPGNS
DEVASASPRKPSLSKEKSDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIQDFLQKGTSG
DGFRGDLYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFGCNQEDMVRDLEQGDVSETVRI
FFEQSKSCPPAAKSLLTIQEVDDFLTQLSKLSKEDDQQSLLQDVANRCTANDLKCIIRLI
KHDLKMNAGAKHVLDALDPNAYEAFKASRNLHDVVERVLRNQQESQKVPGLKRILSVQAT
LMTPVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH
KVAHFKDFIPKAFPGGHSMILDSEVLLIDNKTAKPLPFGTLGVHKKAAFQDANVCLFVFD
CIYFNDVSLMDRPLRERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIREGLEG
LVLKDVKSLYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCY
DPDSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKNYYPDFIVPDP
KEAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWTTATSLPQLRELYQLSKEKS
DFTVVAMEEENSTAGSSGETEGQSRSSTPRKALKQPSSKSPAKAKKPEASKPVEKSPLKK
ATEKRGEKRKASELEGEKGKMLLDIFTGVKLYLPPSVEGFSKIRRYFVAYDGDLVREFDT
SSATHVMGDVEENPSAKQVSPDWIWECIRKRRLVAPC
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgccttttctgctcagggtacatctcctaaaggcagccaaaaccctcagcagaagtgaa
aaaacctccttgctttcagcacagacagctcaaacccgtgctggccacagtttccaaaag
atcgttgccttccgcaggtgttcttggttgtggagcagcagcagcaccccatctccagct
ggctggtggtaccagctgtgcattttccgtggctttctcttcccggcaccactacccgtt
tggccctcaaagcccctgtgcacagtctccgagatggcagagcagcggtactgcgtggac
tatgccaagcgaggcacggcagggtgcaagaagtgcaaggagaagatcctcaaggggatg
gtgcgaatcgggaaggtggtgcccaacccattctcggagtccggtggggacatgaaggag
tggtaccacatcaagtgtattttcgagaagttggagagggcccgggcgacaacaaagaag
attgaggacatcacggacttggagggctgggaggagctgcaggacagtgagaaggagctg
ataaaccagcacatctcggatctgacttccaaacctgcaaacacgccgaagaaaaagtcc
accgtccaggcgaagatttctcccggtggtcaaatcacctcccccaagaaaatgccggca
gcttcttctgatccatcaccaaagaaattttctgggtttacagctaagccgggcaactct
gatgaagtggcctcggcatctccccgcaagcccagcttgtccaaggagaagagtgatcca
aagcacaaggactgtttgctgcgggaattcaggaagctttgcgctatggtagccgacaag
cctagctacaacgtcaagacccagatcatccaggacttcctgcagaagggaaccagtgga
gatggcttccgtggggatctctacctgacagtcaagctgctgttgccgggggtcataaag
agtgtttacaacctgaatgacaagcagatcgtaaagctcttcagcaggatatttggctgc
aaccaagaggacatggtccgagaccttgaacaaggtgatgtgtctgagacagtgcggatc
ttctttgagcagagcaaatcctgccccccggctgccaagagcctcttgacgatccaagag
gttgatgacttcctgacacagctctctaagctttccaaagaggacgaccagcaaagcttg
ctgcaggatgttgcaaacaggtgcacggccaatgacctgaagtgcatcatccggttgata
aagcatgacttgaaaatgaatgctggagccaaacatgttttggatgctttggacccaaat
gcttatgaggctttcaaagcctcgcgcaacctccatgacgtggtcgaaagggtgctgagg
aaccagcaggagtcccagaaggtgccaggcctaaagaggattctcagcgtccaggccacg
ctgatgacccccgttcaacccatgctggctgaggcctgtaagtccatcgagtacgccatg
aagaaatgccccaacgggatgtactcggagatcaagtacgacggggagcgcgtccaggtg
cacaagaatggcgaccacttcagctacttcagtcgcagcttgaaacctgtccttccacac
aaggtggcccatttcaaggacttcatccccaaggctttcccagggggacacagcatgatc
ctggattcagaagtccttctaatcgacaacaagacagccaagccccttccctttgggaca
cttggagtgcacaagaaagcagctttccaggacgctaacgtctgcctctttgtgtttgac
tgtatctacttcaacgacgtcagtctgatggacaggccgctccgtgagcgccgcaagttt
ctccacgataacatggtggaaatccccaaccgaatcctcttctcggagatgaagcacgtc
acgaaagcttcggaccttgctgatatgatcaaccgggtcatccgtgaggggctggagggg
ctggtcctgaaagatgtgaagagcctctatgagccaggaaaacgtcactggctcaaggtg
aagaaggactacctgaacgaaggggcaatggctgacacggcagacctggtggtcttgggt
gccttctacggccaagggagcaaaggggggatgatgtccatcttcctcatgggctgctac
gatcccgacagccagaagtggtgcacggtgaccaaatgcgccggcggccatgatgacgcc
acgctggcccggctgcaaaaggaactggacatggtgaagatcagcaaggatcccagtaag
attccaagctggctgaaaataaataagaattattacccagacttcattgttccagatcca
aaggaagcgccagtctgggagatcacaggggctgagttctccaaagcagaggcccacacc
gccgatgggatctccatccgctttccacgctgcacacggatccgagacgacaaagactgg
accacggccacttccctaccacaactccgggagctttaccagttgtccaaggagaagtct
gacttcactgtggtcgccatggaggaggagaactccacagctggcagcagcggagagaca
gaagggcagtcgaggtcttccactccccgcaaggctctgaagcagccctccagcaagtcc
ccggcaaaagctaagaagcctgaagccagcaaacctgtagaaaagtccccgctgaagaag
gccacggagaagcgaggagagaagaggaaagcctctgagctggaaggagagaaggggaag
atgctgctggatatcttcactggggtgaagctgtacctgcctccctccgtggaaggcttc
agcaaaatcaggcggtattttgtcgcctatgacggagacctggtccgcgaattcgacacc
tcctcagcgacacacgtcatgggggacgtggaagagaatccatctgccaagcaagtctcc
ccggactggatctgggaatgcatacggaaaaggaggctggtagccccttgctaa
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