Zootoca vivipara (common lizard): 118096824
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Entry
118096824 CDS
T07275
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118096824
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zvi04040
]
118096824
Ion channels [BR:
zvi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118096824
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118096824
NCBI-ProteinID:
XP_034994945
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Position
LG15:3158431..3175253
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AA seq
834 aa
AA seq
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MSGILGKMRKLGSSDLEDSESMDDHLEGEESGAGTPGSNRSTKHSIFARRARFGIGDGDK
DAAPMDSFYQMDHTVSSPILKFSLSLERGRCGNYSPKLLHRGARRETSMGGRPEKAFRIY
NRRRLFDAVAQGDPSELDDLLTYLLETLKNLTDEEFKEPDTGKTCLLKAMLNLHNGRNDT
IPLLLEIAEKTDNLKEFVNAEYTDSYYKGQTALHIAIERRNMYLVDLLVRNGADVNAKAH
GEFFQKISGRPGFYFGELPLSLAACTNQLNIVKYLLNNPYHPADIAAQDSMGNTVLHALV
EIADNTEDNTKFVTKMYHDTLILGARLNPTLKLEDIANRRGLTPLTLAAKTGKIQVFAYI
LRREIKEPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCERNSVLEIIAYSSETPNRHEML
LVEPLNQLLQDKWDRFVKHLFYFNFFIYAAHIVILTVAAYNRPTKKHGEPPFAFNHTTNE
YFRVTGEILSVLGGAYFFFRGIKYFKQRQPSLKAIFTNSYSELLFFIHSVLILGSAVLYF
SKQELYVILMVFALALGWTNLLYYTRGFQQMGIYSVMLEKMMLRDLCRFIVVFLLFHLGF
STAVVTLIEDDDELLAQNQTHSSCQAKCRPSYNNFYSTCLELFKFTIGMGDLEFTDSYHF
RSVFIILLVTYVIVTYILLLNMLIALMGETVNKISQESKSIWKLQRAITILNIENSYWNC
IVNSFRSGKQVMVGTTPDGKNDYRWCFRVDEVNWSTWNTNLGIINEDPGGYSEELKRNLS
FSFKYGRVSGKNWKTLVPIRRDGKREGSLKPISEDGADSEEQGPRKKSLPNPVL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatcctggggaagatgcggaagcttgggagctctgacctggaggattcggaa
tcgatggatgaccacttggaaggcgaggagtccggcgcaggcacgcccggcagcaacagg
tcgaccaagcacagcatcttcgccaggcgggcgcggttcgggattggggacggagacaag
gacgcggctcccatggattccttctaccagatggaccacaccgtctccagccccatcctc
aagttcagcctcagcttggagcgagggaggtgtggcaactactctcccaagcttctccat
cgcggggctcgccgagaaacctccatgggcgggcgccccgagaaagcgttcaggatctac
aaccgaaggaggctctttgacgcggtggcccagggggatccgagtgagctggacgacctg
ctcacctacctcctggagaccctgaaaaacctgacggatgaggagttcaaagaaccggac
actgggaagacatgcttgttgaaagccatgctgaacctccacaacggccggaacgacacc
atccctctcctgctggagattgcggagaagacggacaacctgaaggagtttgtgaatgcc
gagtacacagacagctactacaagggccaaaccgcgctgcacattgccattgagagacga
aacatgtaccttgtggacctcctagtcaggaacggcgccgatgtcaacgcgaaagctcat
ggggagttcttccagaaaatcagtggcaggcccgggttttattttggtgagctgccgctc
tctttggctgcctgcacaaaccagctcaacatcgtgaagtaccttctcaataacccctac
cacccagctgacattgccgcccaggattccatgggcaacaccgtcctccatgctttggtg
gagattgccgacaacacggaggacaacaccaagtttgttaccaagatgtaccacgacacc
ctcatcctgggtgccaggctcaaccccaccctcaagctggaagatatcgccaaccgaagg
gggctgacaccgctgaccctggcggccaagactgggaagatacaggtctttgcgtacatc
ctcagacgggagatcaaggagccagagtgtcgccacctgtcccggaagttcacagaatgg
gcttatgggcccgttcactcgtcactctacgacctgtccagcattgacacctgcgagagg
aactcggtcctggagatcattgcttacagcagtgagacaccgaaccgtcacgagatgcta
ctggtggagcctctcaaccagctcctgcaggacaagtgggaccgattcgtcaagcacctc
ttctacttcaacttcttcatttatgctgcccacatcgtcatcctcactgtcgccgcctat
aacaggccaacgaaaaagcacggggagcccccgttcgcctttaatcacacaaccaacgag
tatttccgagtcaccggggagatcctgagtgtgttgggaggtgcctatttcttcttcaga
gggatcaagtattttaagcagagacagccatccctgaaagcaatctttacgaacagctac
agtgaacttctcttcttcatccactctgtccttatcctgggctcagcggtcctgtacttc
agcaagcaagaactctatgtcatcctcatggtcttcgccttggccctgggctggaccaac
ctgctctattacacccgtggcttccagcagatggggatttactcagtcatgctggagaag
atgatgctgagagacctgtgccgtttcatcgtggtcttcctccttttccatttgggcttt
tcgacagctgtcgtgaccctcattgaggacgacgatgagctgctggcacagaaccaaact
cacagttcctgtcaagcaaagtgccgcccttcctacaacaacttctactccacctgccta
gaacttttcaagttcacgattgggatgggagatttggagttcactgacagttaccacttc
aggtcagtcttcatcatcctgctggtgacttacgtcatagtcacgtacatcctcctcctc
aacatgctcatcgccctgatgggagagacggtcaacaagatttctcaggagagcaaaagt
atttggaagctccagagagccatcaccatcttgaacatcgagaacagctattggaactgc
attgtcaactccttccgatctgggaaacaagttatggtggggactactccggatgggaaa
aacgattaccgttggtgctttagggtggatgaggtcaactggtccacatggaacaccaat
ctgggcatcatcaacgaagaccctggtggatacagtgaggagctgaaacggaacctgagc
ttttctttcaagtatgggagagtttcagggaagaactggaagaccttggtcccaatccgg
agagatgggaaacgagaagggtcgctcaagcccatttcggaagacggcgcggattcagaa
gagcaaggcccccggaagaaatctctccccaaccctgtcttgtga
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