Zootoca vivipara (common lizard): 118096888
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Entry
118096888 CDS
T07275
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118096888 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118096888 (RABGEF1)
Membrane trafficking [BR:
zvi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118096888 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
118096888 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
118096888
NCBI-ProteinID:
XP_034995121
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All DBs
Position
LG15:complement(14995974..15029627)
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AA seq
531 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQKARQKQIQEDWELAER
LQREEEEAYASTQHPQGAQSLTFTKFEEKKTNEKSRKVTTVKKFFGASSRPGAKKAAQES
SVKSGQLGKELSADNLLRDLKEIFTPPWELSSPAEDVPDAKAPSPSISRQVSIETDRVSK
EFIEFLKTYHKSGQEIYKQCKHFLENMHHKRDLSIEEQSEYAQDFYQNVADKLQSRWKVS
PEKAEKVMDQIEKYVMTRLYKHVFCPETTEDEKKDLAIQRRIRALHWVTPQMLCVPVNEE
IPEVSDMVVKAITDIIEMDSKRVPRDKLTCITSCSKHIFTAIRTTKDEPASADDFLPTLI
YIVLKGNPPRLQSNIQYITRFCNPSRLMSGEDGYYFTNLCCAVAFIEKLDAQSLNLSEED
FDRYMSGQASPKKQEPESWPADVCVGVQQMYRNLDLLSQLNERQERIVSEAKKLEQDLID
WTDGITKEVQEIVEKYPLEIKPPNPALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtcggaacgccgaggcatccacgtggaccagtccgaactgctctgcaag
aaaggatgcggttactatggcaacccggcttggcagggcttctgctccaagtgctggagg
gaggagtaccaaaaggccaggcagaagcaaatccaggaggactgggagctggctgagagg
cttcagcgtgaggaggaggaggcctacgcaagcactcagcaccctcaaggggctcagtcg
ctcacgttcaccaagtttgaggagaagaaaaccaatgagaaatcacggaaggtgacgacg
gtgaagaaattctttggggcgtcatctcgaccgggagctaagaaggccgctcaggagtcc
agcgttaagtccggacagcttgggaaggagctcagtgctgataaccttctcagggacttg
aaggagatttttactccaccctgggaactctcttctcctgctgaagatgtcccagacgct
aaggctcccagcccttcgatcagccggcaagtcagcatcgaaacggaccgggtgtccaag
gagttcattgagtttctgaagacataccataaatccggccaggagatctacaagcagtgc
aaacacttcttggaaaacatgcatcacaagcgggacctgagtattgaggagcagtccgaa
tacgcccaggacttctaccagaacgtggcagataagttgcagagccgctggaaagtgtcc
ccggaaaaagcggagaaggtgatggaccagatcgagaagtacgtcatgactcggctttac
aaacacgttttttgcccggaaaccacggaggatgagaagaaggaccttgctatccaaagg
aggatcagagctttgcactgggtcactcctcagatgctctgtgttcctgtcaatgaagaa
atccctgaagtctccgacatggttgtcaaggccatcacagacatcatcgagatggattcc
aagcgtgtcccccgggacaagctgacctgcatcaccagttgcagcaaacacatcttcact
gccattcgaaccacgaaggacgagccggcttcggccgacgacttcctgcccaccctcatc
tacattgtcctgaaggggaacccacctcgtctccagtccaacatccagtatatcactcgg
ttctgcaaccccagccggctgatgtctggcgaagatggttactactttacaaacctgtgc
tgtgccgtcgccttcatagagaagctggatgcccagtccctcaacctgagtgaggaagac
ttcgaccgctacatgtctggccaagcgtccccgaaaaagcaggagccggagagctggccg
gccgacgtctgcgtaggggtccagcagatgtacaggaaccttgacctcctctcccagctc
aacgagcggcaggagaggattgtgagcgaggccaaaaaactcgagcaggacctcattgac
tggactgacgggatcaccaaggaggtccaggagatcgtggagaagtatcccttggaaatc
aagccccccaatccggccttggctgccattgactctgaaaacgtggagaatgacaagctg
cctcccccattgcagccccaggtttacgctgggtga
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