Zootoca vivipara (common lizard): 118096982
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Entry
118096982 CDS
T07275
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118096982 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118096982 (PRPF8)
Spliceosome [BR:
zvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118096982 (PRPF8)
Complex C
U5 SnRNP specific factors
118096982 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
118096982
NCBI-ProteinID:
XP_034995375
LinkDB
All DBs
Position
LG15:complement(259946..283220)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPFRGPCPPMPAPLTPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETIEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAENPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYS
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgtgttccctttccgggggccctgccccccaatgcctgctcccttgaccccc
ctgcctgactacatgtctgaagaaaagctgcaggaaaaagctcgcaaatggcagcagctg
caggccaagcgctatgccgagaagcgaaagtttggttttgtggatgcgcagaaggaggac
atgccgccagagcacgtgcggaagatcatccgggaccatggggacatgaccaacaggaag
ttccgacatgacaagcgggtctatttgggtgccctcaaatacatgccccacgcagtcctg
aagctcctggagaacatgccgatgccctgggagcagattcgcgacgtccccgtcctgtac
cacatcacgggggccatctccttcgtcaacgagatcccgtgggtgatcgaaccggtctac
attgcccagtgggggtccatgtggatcatgatgaggcgggagaagagggacaggcggcac
ttcaagcgcatgcgcttcccgccctttgacgatgaggagccgccccttgactacgctgac
aacatcctggacgtggagcccctggaggccatccagctggagttggatcccgaggaggac
gccccagtcctggactggttctatgaccaccagcctctgaaggacaaccgcaaatacgtc
aatggttccacctaccagcgctggcagttcaccctccccatgatgtccaccctctaccgc
ctggccaatcagctcctcacggacctcgtggacgacaattacttctacctgtttgacctg
aaggcctttttcacctccaaggccctcaacatggccatcccaggggggcccaagtttgag
cccctggtccgagacattaacctgcaggacgaggactggaacgagttcaatgacatcaac
aagataatcatccggcagcccatccggacggagtacaagatcgccttcccttacctgtac
aacaaccttccccaccacgtccacctcacctggtatcacaccccaaacgtcgtcttcatc
aagacagaggatccggacctgccagctttctacttcgaccccctcatcaaccccatttcg
cacaggcactctgtgaagagccaggagccgctccctgatgacgatgaggagtttgagctc
ccggagtttgtggagcccttcctgaaggagacacccctctacaccgacaacacagccaac
ggcattgcccttctgtgggcccctcgacccttcaacctgcgctctggcaggacccgcagg
gccctcgacattccccttgtcaagaactggtaccgagagcattgccccgctgggcagccc
gtcaaagtccgcgtctcttaccagaagctgctcaagtattacgtcctgaatgctctcaag
caccgaccccccaaggcccagaagaagaggtacctcttccgctccttcaaggccacaaag
ttcttccagtcgaccaagctggactgggtggaggtcgggctgcaggtctgccgccagggc
tacaacatgctcaacctcttgatccaccgcaagaacctcaattacctccacctggactac
aacttcaacctgaagcctgtcaagaccctcaccaccaaggagaggaagaagtcccgcttt
ggcaatgctttccacctgtgccgggaggtgctgcgcctgaccaagctggtggtggacagc
cacgtccagtacaggctgggcaacgtggacgccttccagctttcagacggcctccagtac
atctttgcccacgtggggcaactgacggggatgtacaggtacaagtacaagctgatgagg
cagatccggatgtgcaaagacctgaagcacctcatctattaccgcttcaatacagggccg
gtggggaagggtcctggttgcggcttctgggcgcccggctggcgtgtctggctcttcttc
atgcgaggcatcactcccttactggagcgctggctgggcaacctcctggccaggcagttt
gaaggccgtcactccaagggggtggccaagactgtcaccaagcagcgtgtggagtcccac
tttgacctggagctgcgcgcagctgtcatgcacgacattctggacatgatgcccgagggg
atcaagcagaacaaggcgaggaccatcctgcagcacctgagcgaagcctggcggtgctgg
aaagccaacatcccctggaaggtgccaggcctgccgacccccattgagaacatgatcctg
cgctacgtgaaggccaaggccgactggtggaccaacacggcacactacaaccgcgagcgc
atccggcgtggagccactgtggacaagacagtctgcaagaagaacttgggccgcctgaca
cggctgtacctgaaggcagagcaggagcggcagcacaactacctgaaggacggcccctac
atcactgcagaggaggcagtggctgtctacaccaccaccgtccattggctggagagccga
cgcttctctcccatccccttcccgcctctctcctacaagcatgacaccaagctgctcatc
ctggccctggagaggctcaaggaggcctacagtgtgaagtctcggctgaaccagtcccag
cgggaggagctggggctcattgagcaggcgtacgacaacccccacgaggccttgtcccgc
atcaagcgacacttgctgacccagcgagccttcaaggaggtgggcattgagttcatggac
ctctacagccaccttgtcccggtctatgacgtggagcccctggagaagatcacagatgcc
tacctggaccagtacctgtggtacgaggccgacaagaggcgcctcttcccaccctggatc
aagccggcagacacggagccccctccgctgctcgtctacaagtggtgccagggcatcaac
aacctgcaggatgtgtgggagaccatcgagggcgagtgcaacgtcatgctggagtctcgc
tttgagaagatgtacgaaaaaatcgacctgacgctcctcaacaggctcctgcgcctcatt
gttgaccacaacatcgctgactacatgacggctaagaacaacgtggtcatcaactacaag
gacatgaaccacaccaactcctacggcatcatccgcggcctacagtttgcctccttcatc
gtccagtactacggcctggtgatggacctgctggtgcttggcctgcatcgcgccagtgag
atggccggccccccgcagatgcccaatgacttcctcagcttccaggacattgccaccgag
gtggcccaccccatccgcctcttctgcagatacattgaccgcatccacatcttcttcagg
ttcaccgccgacgaggctagggacctgatccagcgctacctgacagagcacccggacccc
aacaatgagaacatcgtcggctacaacaacaagaagtgttggccccgagatgcccggatg
cggctgatgaagcatgacgtcaacctgggccgtgccgtcttctgggacatcaagaaccgc
ctgccgcgctcggtcaccacggtgcagtgggagaacagcttcgtctccgtctacagcaag
gacaaccccaacctgctcttcaacatgtgcgggtttgagtgccgcatcctgcccaagtgc
cgcacgagctacgaggagttcacacacaaggacggtgtctggaatctgcagaatgaggtg
accaaggagcggacggctcagtgcttcctgcgggtggacgacgaatccatgcagaggttc
cacaaccgggtccggcagatcctgatggcctccggctccaccaccttcacaaagatcgtg
aacaagtggaacacagccctgattgggctgatgacctacttccgggaggccgtggtgaac
acccaggagctgctggacctgctggtgaagtgcgagaacaagatccagactcggatcaag
attggcctgaactccaagatgcccagccgctttccgccggtcgtcttctacacccccaag
gagctggggggcctggggatgctgtccatggggcatgtcctcatcccccagtctgacctc
aggtggtccaagcagacggacgtgggcatcacccacttccgctcagggatgagccacgag
gaggaccagctgatccctaacttgtaccgctacatccagccatgggagagcgagttcatt
gactcccagcgggtgtgggccgagtacgccctcaagaggcaggaggccatcgctcagaac
aggcgtctgactctggaggatttggaggactcatgggacaggggcatccctcgcatcaac
accctcttccagaaggaccgccacaccctggcctacgacaagggctggagggtcaggacg
gatttcaagcagtaccaggtcctgaagcagaacccgttctggtggacccaccagcgccat
gacgggaagctctggaacctgaacaactaccgcacagacatgatccaggccctgggcggg
gtggagggcatcctggagcacaccctcttcaagggcacctacttcccaacctgggagggt
ctcttttgggaaaaggcttccggctttgaggaatccatgaagtggaagaagctgaccaac
gcccagcgctcaggtctcaaccagatccctaaccgaaggttcaccctctggtggtctccc
accatcaacagggccaacgtatatgtgggcttccaggtgcagctggacctgacaggcatc
ttcatgcacggcaagatccccacgctgaagatctccctcatccagatcttccgggcccat
ttgtggcagaagatccatgagagcatcgtcatggacttgtgccaggtgtttgaccaagag
ctggacgccctggagattgagacggtgcagaaggagacgatccaccccaggaagtcctac
aagatgaactcctcctgcgcagacatcctcctctttgcttcctacaagtggaacgtctcc
cgtccctccctgttggcagactccaaggatgtgatggacagcaccaccacccagaagtac
tggatcgacatccaattgcgctggggcgactacgactcccacgacattgagcgttacgcc
cgggcaaagttcctggactacaccacggacaacatgagcatctacccgtctcccaccggt
gtcctcatcgccatcgacctggcctacaacctgcatagcgcctacgggaactggttcccc
gggagcaagcccctgatccagcaggccatggctaagatcatgaaggccaacccagctctg
tacgtcctgcgggagcggatccggaaggggctgcagctctactcctccgagcccaccgag
ccctacctgtcctcccagaactacggggagctcttctccaaccagatcatctggtttgtc
gacgacaccaacgtctacagggtcaccatccacaaaacctttgaagggaacctgacgacc
aagcccatcaacggggccatcttcatcttcaacccccggacggggcagctcttcctgaag
atcatccacacctccgtgtgggcagggcagaagcggttgggccagctggccaagtggaag
acggctgaggaagtggcggccctgatccgctccctgcccgttgaggagcagccaaagcag
atcatcgtcactcggaagggcatgttggaccctctggaggtgcacttgctggatttcccc
aacatcgtcatcaaaggctcagagctccagttgcccttccaggcctgcctgaaagtggag
aagttcggggacctcatcctgaaggctacagagccccagatggtgctcttcaacctctac
gatgactggctgaagaccatttcctcctacacggccttctcccgcctgatcctcatcctc
cgggctctgcacgtgaacaacgaccgggccaaggtcatcctgaagccagacaagaccacc
atcacggagcctcaccacatctggcccaccctgacggacgaggagtggatcaaagtggag
gtgcagctgaaggacttgatcttggccgactatgggaagaaaaacaacgtgaacgtggcc
tccttgacacagtcggagatccgggacatcatcctgggcatggagatctctgccccttcg
cagcagcgccagcagatcgccgagatcgagaagcagaccaaggagcagtcgcagctgacg
gccacccagacacggaccgtcaacaagcacggcgatgagatcatcacctccaccaccagc
aactatgagacccagaccttctcctccaagacagagtggcgcgtcagggccatctccgct
gccaacctccacctgcggacaaaccacatctacgtctcttcggacgacatcaaggagacg
ggctacacttacatccttcccaagaatgtcctgaaaaagttcatctgcatatcggacctg
cgtgctcagattgcaggatacctgtatggggtgagccccccagataacccccaggtgaag
gaaatccgatgcatcgtgatggtgcctcagtggggcactcaccagactgtccaccttcct
ggccagctgccccaacacgagtacctcaaggagatggagcccctagggtggatccacaca
cagccaaatgagtcgccccagctctccccacaggacgtcacgacccatgccaaagtcatg
gctgagaacccctcttgggatggcgaaaagaccatcatcatcacctgcagcttcaccccc
ggctcctgcaccttgacggcctacaagctgacccccagtggctacgagtggggcaggcag
aacaccgacaaagggaacaaccccaagggctacctgccctctcactacgagagggtgcag
atgctgctctccgaccgcttcttgggcttcttcatggtgccagcgcaaggctcttggaac
tacaacttcatgggtgtccgtcacgatcccaacatgaagtatgagctgcagttggcgaac
cccaaagagttctaccacgaggtccaccgcccctctcacttcctcaacttcgccctcctg
caggaaggggaggtgtactctgccgaccgagaggacctctactcctag
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