Zootoca vivipara (common lizard): 118096992
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Entry
118096992 CDS
T07275
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118096992 (VPS53)
Membrane trafficking [BR:
zvi04131
]
Protein recycling
Others
EARP complex
118096992 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
118096992 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Laminin_II
XhlA
Sec8_N
hAT-like_RNase-H
Syndetin_C
COG3_N
NBD94
MCPsignal
COG5_N
FUSC
GrpE
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
118096992
NCBI-ProteinID:
XP_034995394
LinkDB
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Position
LG15:3685377..3725127
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AA seq
831 aa
AA seq
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MEEDELDLADELEDALQLAPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DDVVNKIKLKIRRLDDNIRTVVRGQTNVGQDGREALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRAGGASNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YVRMFPAEWCMTERIAVDFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLSDAVPKKAEPPPPNTNPFLEDETVLESDEATLEKVDIDRPKKPKVPDNPFHGIV
SKCFEPHLYVYIESQDKNLSELIDRFVGDFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLMGEMDTFSIVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSNMLDLFRQRLPAPPSGGDNAGSISLTAPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagctggacttggccgacgagctggaggatgccctgcagctggcgccg
gaggtgcagttggccatcgagcaggtttttccgagtcaagatccgttggaccgagctgac
ttcaacgctgtggaatacatcaacacgctgtttccaactgagcaatctttggcaaacatt
gatgatgtggtgaacaagatcaagctgaaaataaggcgtttggatgataacatccggacc
gtggtgagaggccagacaaacgtcgggcaggatggccgcgaggcgctggaagaagcccag
aaggctattcagcagctctttggcaagattaaggacatcaaggacaaagctgaaaaatct
gagcagatggtgaaggaaatcacccgtgatatcaagcagctggaccacgccaagcgccac
ctgaccacctccatcacgaccctgaaccacctccacatgctggctggcggagtcgattcc
ctggaggccatgacgaggaggcggcagtacggggaagtggccaacctcctgcaaggggtt
gtgaatgtgctggagcatttcaacaaatacatggggatcccgcagattcgccagctttcg
gagagggtgaaggctgcccagaacgagctggggcaacagatcctggcagatttcgaggaa
gcgtttccctctcaaggcacaaagagggctggaggtgccagcaacgtcctacgggatgcc
tgcctggtcgcaaacgtcttggaccccagaatcaagcaggagatcatcaagaaattcatc
aagcagcacctctcggaataccttgtgctcttccaggaaaaccaagatgtcgcctggctg
gataaaatcgaccggcgttacgcttggatcaaacgccagctggtggattacgaggagaag
tacgtccgcatgttccctgcggaatggtgcatgaccgagaggattgcggtcgacttctgc
cacattacgaggacggagcttgcaaagatcatgcggacgcgggcgaaggagatcgaggtg
aagctccttctgtttgccatccagaggaccaccaacttcgaagggctgctggcgaaacgc
ttctcgggttgcacgctctccgacgcagtgccgaagaaggccgagcctccacctcccaac
accaaccccttcctggaagacgaaaccgtcctggagtcggacgaagccacattagaaaag
gtcgacattgacagacccaaaaagccgaaagttccagacaacccttttcatggcatcgtc
tccaagtgctttgagcctcatctctacgtctacattgaatcccaggacaaaaacctcagc
gagctgattgaccgcttcgtgggggatttcaaagcccaggggccccccaagccgaacgtg
gacgagggcggggccgtcctgcccagctgtgccgacctctttgtgtactacaagaaatgc
atggtgcaatgttcccagctgagcaccggggagccgatgatcgccctcaccaccatcttc
cagaaatacctccgggaatacgcctggaagatcctctcgggaaatctgcccaagacgacc
agcagcagtggcgggctgactatcagcagcctgctgaaggagaaagagggctcggaggtc
gccaaattcaccttggaagagctctgcttaatctgcagcatcctgagcacagcggagtac
tgcttggccaccacccaacagctcgaagagaagctcaaggagaaagtggacgccagcctg
gtggagcggatcaatctgatgggggagatggatacctttagcatagtgatttctaacagc
atccagcttctggtgcaggacttggacgctgcctgtgacccagctctcacggccatgagc
aagatgcagtggcagaacgtggaacacgtgggcgaccagagcccctacgtcacgtccgtg
atcttgcacatcaagcagaacgtccccatcatccgggacaacctggcctccacccgcaag
tacttcacgcagttctgcatcaagttcgccaactccttcatccccaaatttatcaaccac
ctcttcaagtgcaagccgatcagcatggtgggggcagaacagctgcttttggacactcat
tctctgaagatggttcttctagacctgccgtctatcgggtcgcaggtggtgaggaaggcc
cccgccagctacaccaagattgtggtgaaaggcatgacccgtgccgaaatgattcttaag
gtcgtgatggccccccacgagccgcccgtggtgtttgtggacaactacatcaaactcctg
gcggactgcagcacagacaccttccagaagattctggacatgaagggtctgaagagaagt
gagcagagcaacatgctggacttgttccgccagaggctcccggcccctccatccggaggc
gacaacgccggctccatctccctgacggcccccacgcccgagcaggaatcctcccgcatc
cggaagctggagaaactcatcaagaagaggctctag
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