KEGG   Zootoca vivipara (common lizard): 118097001
Entry
118097001         CDS       T07275                                 
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
  KO
K06238  collagen type VI alpha
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi04510  Focal adhesion
zvi04512  ECM-receptor interaction
zvi04518  Integrin signaling
zvi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118097001 (COL6A1)
   04518 Integrin signaling
    118097001 (COL6A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118097001 (COL6A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118097001 (COL6A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zvi04147]
    118097001 (COL6A1)
   00536 Glycosaminoglycan binding proteins [BR:zvi00536]
    118097001 (COL6A1)
Exosome [BR:zvi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118097001 (COL6A1)
Glycosaminoglycan binding proteins [BR:zvi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   118097001 (COL6A1)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   118097001 (COL6A1)
SSDB
Motif
Pfam: VWA Collagen VWA_2 DUF1194 VWA_3 vWA-TerF-like
Other DBs
NCBI-GeneID: 118097001
NCBI-ProteinID: XP_034995413
LinkDB
Position
LG1:130162950..130219488
AA seq 1015 aa
MKLAYFFPAFLLQGCFLLRTVLAQATAVSNGAVTFQDCPVDLFFVLDTSESVALREKPFG
ALVDQVKEFTNRFLDKLTDRYYRCDRNLVWNAGALHYSDEVQLIKALSRMPAGRTDLKNR
VSSVVSIGKGTYTDCAIKRGIEELLIGGSHKHENKYLIVVTDGHPLEGYKEPCGGLEDAA
AEAKHLGIKVFSIAISPDHLESRLGVIATDHSYRENFTATGRQARDIDSTIDKITARITE
TVEQECCSYECQPARGPPGSLGDPGYEGERGKPGLPGEKGDAGEPGKQGDPGPIGYQGMK
GEKGTRGDKGSRGAKGAKGEKGRRGIDGLDGKKGEQGFHGLPGCKGSPGFDGLQGPPGPK
GDLGPYGPKGRKGEPGLGGRPGRTGNSGSPGDKGPPGESGNPGEKGELGDEGNPGPDGPT
GDRGANGERGPLGNPGNRGPRGEKGDPGAQGDQGREGPFGPPGEPGEAGPAGPKGYRGDE
GSSGPEGPKGLPGPPGLPGETGLMGDRGEDGRAGNGTDGFPGFPGYPGNRGDPGANGTKG
YPGPKGDEGEIGDPGLESNATGTRGMKGAKGYRGPEGPPGPTGPRGPPGPDECEILDIIM
KMCSCCECKCLPGDVLFVLDSSESIGLQNFQIAKDFIVKVIDRLIKDEKVTFRQGETNIG
VVQYSHDNTQELVALGDSNIDNIGAFKEAVKNLHWIAGGTYTGEALQFTKDNLLRRFPSE
KRVVIVITDGRSDVLRDQTPLNVLCESKTQVVPLGIGDISNKPANTEQLSTISCGGISVY
QENFALLLDDNFLQNVTSQICKEKKCPDYTCPISFAGPADLTLLVDSSTSVGSRNFNTTK
TFVKRLSERFLTAAKPSEDAVRISVVQYSGKGQQKAEVRFEQNYTVVANAIDSMEFMNDA
TDVNAALRFVTSLYRQASRSGAKKRVLIFSDGNSQGITSSAIEKAVQEARQAGLEIYVLA
VGTQVNEPNVRVLVTGKAAEYDVAYGERHLFRVPDYQALLRGVFYQTVSRKISVD
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgaaattagcttactttttcccagccttcctacttcagggctgctttcttttgagaaca
gttcttgctcaagcaacagccgtctccaatggtgcagtaacatttcaagattgtcctgtg
gatctgtttttcgtcttggatacctctgagagtgttgccttaagagaaaagccttttggt
gccttggtggatcaagttaaagaattcaccaaccgattccttgataagttaactgacaga
tactatcgatgtgaccggaatcttgtgtggaatgcgggagccttgcattacagcgatgaa
gtgcagctgatcaaggcgctcagccggatgcctgcagggagaacagacctgaagaacagg
gtgtcctctgtggtttctattgggaaaggaacctacacagactgtgccatcaaaagaggg
attgaagagctgctcatcggaggatctcataagcatgagaataaatacctgattgtggtg
acagatggacaccccttggaaggctacaaagagccctgtggtggattggaagatgctgca
gctgaagcgaaacatctggggatcaaagtgttctccattgccatatctccagaccatctg
gaatctcggctgggtgtgattgccacagaccattcctatcgtgagaatttcacagcaact
ggacgtcaagcacgtgatattgacagcacaattgacaaaatcactgctagaattacagag
acagtggagcaagagtgctgctcatatgaatgccagcctgctcgaggccccccgggatca
ttaggggacccaggatatgagggagaaagggggaaacctggccttcctggtgaaaaagga
gatgctggagaacctgggaagcaaggtgacccagggcccattggttaccaaggcatgaag
ggagaaaaaggtacccgaggtgacaagggctcaagaggtgcaaaaggagctaagggggag
aaaggcaggcgtggcatcgatggtttagatggcaagaagggtgaacaaggatttcatggg
ttaccaggatgcaaaggatccccaggatttgatggcttacaaggacctcctgggccaaaa
ggggatctaggtccttatggacccaaaggaagaaagggagagcctgggcttggtggaaga
ccaggtaggacaggaaactctggaagtcctggagataagggaccgcctggagagtccgga
aatcctggagagaaaggagaattgggagatgagggaaatcctggcccagatggccccacg
ggagacaggggtgcaaatggagaaagagggcctctaggtaatcctggtaaccgtggacca
agaggagaaaagggtgacccaggggcacagggtgaccaaggccgcgaaggaccttttgga
ccacctggagagccaggtgaagcaggcccagctggtccgaaagggtacagaggagatgaa
ggctcttctgggccagagggtcctaaaggactgcctggcccacctggattacctggagaa
actggcttgatgggtgacaggggagaagatggccgagcaggaaatggcacagatggtttc
cccggtttcccgggatatcctggcaacaggggtgatcctggggctaatggtaccaaaggc
tatcctggtcccaaaggcgatgaaggagagatcggagacccagggctggaaagcaatgca
actgggacccgaggcatgaaaggagccaaaggctacagaggaccagaagggcccccagga
cccacaggacccagaggccctccaggaccagatgaatgtgaaattttggatatcatcatg
aaaatgtgctcttgctgtgaatgcaagtgtcttcctggtgatgttctctttgtactggac
agttcagagagcattggcctgcagaacttccagattgctaaggatttcattgtcaaggtc
attgacaggcttatcaaggatgaaaaagtgacgtttagacaaggggagaccaacattggt
gtcgtgcagtacagccatgacaacacccaggaattggtggccttgggagacagcaacatt
gataacattggagccttcaaggaagctgtgaagaacctgcactggattgctggtggcaca
tatactggggaggcccttcagttcaccaaggataacttgctgcggcgctttccctctgag
aaaagagtggtcatagtcatcacagacggacggtccgatgtacttcgggaccaaacacca
ctcaacgttctctgtgaaagcaagacccaggtggttcccctgggtatcggtgatatttcc
aacaaaccagcaaacactgagcaattatcaactatttcctgtgggggcatctctgtttat
caagaaaactttgctttgctgctggatgacaatttcctgcagaatgttacctctcagatc
tgtaaagaaaagaaatgcccagactacacttgcccaatctcttttgctggtccagctgat
ctcacactccttgtggatagttccaccagtgttgggagccgcaacttcaacaccaccaag
acgtttgtgaagcgcctttcagaacgattcctgacagcagccaagccttcggaggatgcc
gtgcgcatttctgttgtccagtacagcggcaaaggccagcagaaagcggaggtgcggttt
gagcaaaactatacggtggttgctaatgctattgacagcatggaattcatgaatgacgcc
acagacgtgaacgcagccctccgctttgtcactagtctctaccggcaggcctcccgttct
ggagctaagaagagagtcctgattttctctgacggcaactctcaaggcatcaccagcagc
gccattgagaaggcagttcaagaggctcgacaggcaggccttgaaatttatgtactagcg
gttggcactcaagtcaatgagcccaatgtgcgtgttcttgtcactgggaaagcggcagag
tacgatgtggcctatggagagaggcaccttttcagagtgccggattaccaggctctgctg
aggggagtgttctatcaaactgtctccagaaaaatatctgtagactga

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