Zootoca vivipara (common lizard): 118097211
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Entry
118097211 CDS
T07275
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118097211 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118097211 (SCARF1)
Membrane trafficking [BR:
zvi04131
]
Endocytosis
Phagocytosis
Scavenger receptors
118097211 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RILP
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
DUF3584
Motif
Other DBs
NCBI-GeneID:
118097211
NCBI-ProteinID:
XP_034995830
LinkDB
All DBs
Position
LG15:complement(235183..257390)
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AA seq
1198 aa
AA seq
DB search
MASSCAPCFSFAFCSFGLPGRGGNQSEETGGRGLPQARTSNYSAKSTQRREKEVMLRLKE
VVDKQRDEIRAQAHEILCKARDTEALQEQLNRFMTVNEEIRRKLAIVQAQLQSALQRKEE
LESALLEARQEVERLSEAAGAAKEALRTSATDQEVAPGEELPGSGQGRRSYSKEELQQVL
QERNELKTSLFLVQEELAYYQRELLNDERIPSLLLDAVKSTIKKQRRKIRAKMLGTAEEP
LSSDQEEEGVWLGSPMGSDCVDSRLPESKIRSFFGLWYRGSSKSSSPEDCPGAWEIVDPQ
DVGPEEEEEQGGREASCSFSPPSGPSPFPRVMERWALPLFLCLQALGLGDGSSSPDLDPS
GRNVCRSSSHPPVFTCCPGWKQEGQECPAALCTGADACREGEVCVRPGVCRCRPGFFGAN
CIARCPDQYWGPDCKESCACHPNGKCDPANGECRCHPGWWGPLCQSVCPCGPRGRCDPLT
GVCHCEPGWWAPDCRRQCPCNLSGSRCDPVTGRCLCHRGWWGRRCSSLCSCHGSPCAQET
GRCECRTGQWGAACQASCQCLHGTCAPQDGRCTCHAGYQGDSCREPCPAGKYGLQCMQSC
GHCQDLKACFPVDGSCPACDPGWNGTHCKQPCPPGHHGENCALLCPPGCREGESCHPETG
ECRSCKAGLTGARCELSCPEGFFGDGCRFVCPDCFNGSCDPASGACVCQAGFWGTSCNWT
CPAGSHGPNCSEPCQCGGGLCHPVTGDCQWGQNQAALLAGILTPLILLVLLCMCCCCCCC
CESTPMETRSAAVEGDPISRVKHHVLGTLANLSPTLPCFSLGGYKLPRVTVSHHDAEIPF
NPSFIEPPSAAWPSDSSFSSSFDTDEDHEDPASPAQEAARTKHQPGFPPEEPALNSEPFA
IPRTSSIAKAKRPSVSFAEGTRFISQSPRGSTEALNPTWKAKAPWGSARATSLQQPPADP
AGQEGLPAMGESPGGCYENVEPGGREEGSHRPCSSSSTQRRSSGGHRKRGKSSRHVAQRV
EALEAASKAQAKSPGVTTIYVTVGKAGSEGPVQAVLQRLGSLQRAKQLPREELQQRPRRR
SLEGLLQKPPRRRVLLDSEGDAGRLLPQGGTGQEAATMLCAEASTPEEAAEPQGFARGPG
APAGGESGGGSSGGSSSESPSSHSQAEVAAGGGGGGPLLEKEEQEPKYENVSGWSSSP
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgtgtgcaccttgtttctcttttgctttctgctcctttggcttgccaggg
cgtggaggaaaccagagcgaggagacaggcgggaggggcctcccccaagcaagaacaagc
aactatagtgcaaaaagcacccagcgcagagagaaagaggtgatgctgcgcctcaaggag
gtggtggacaagcagcgggacgagatccgtgcccaggcccacgagatcctctgcaaggcc
cgggacactgaggcgctgcaggagcagctgaaccgcttcatgactgtcaacgaggagatt
cgccgcaagctggccatcgtccaggcccagctgcagagcgccctgcagaggaaggaggag
ctggagagcgccctgctggaggcccgccaagaagtggagaggctgagcgaggctgcgggg
gcagcaaaagaggccttgaggactagcgccacggaccaggaggtggcgcctggtgaggag
cttcctggcagcggccagggcaggaggtcctactccaaggaagagctgcagcaggtcctg
caggagcgcaacgagctcaagaccagcctgttcctggtgcaagaggagctggcctattac
cagcgggagttgctgaatgatgagcggattcccagcctcctcctggacgccgtgaaatcc
accatcaagaagcagcgcaggaagatccgggccaagatgctgggcacagcagaggagccc
ctgagcagcgaccaagaggaggagggcgtgtggctggggtcccccatgggctcggactgt
gtggacagccgcctccccgagtccaagatccggagcttttttggcctctggtatcgtggg
agcagcaaaagcagctcgccagaagactgccctggagcctgggagatagttgaccctcaa
gatgtgggtcctgaggaggaggaggagcagggagggagggaggcctcctgcagcttcagc
cccccaagtggaccctcgcccttcccgagggtgatggagcgctgggccctgccgctcttc
ctctgcctccaggcgctgggcttgggggacgggagtagcagccctgacctggaccccagt
gggagaaacgtctgcaggtccagcagccacccgccagtcttcacctgctgcccaggatgg
aaacaggagggccaggagtgcccagctgcactctgcacaggagcagacgcctgccgggag
ggtgaagtctgtgtccgcccgggtgtttgccgctgccggcctggattctttggggccaac
tgcattgcacgctgccccgaccagtactggggtccggactgcaaagagagctgcgcttgc
caccccaacgggaagtgtgacccggccaacggagagtgccgctgccaccctgggtggtgg
ggccccctctgccagtccgtgtgcccgtgtggccccagaggccgctgcgaccccctcacc
ggggtctgccattgcgagccaggctggtgggcgcccgactgcaggcgccagtgcccttgc
aacctctctggctcccgctgcgaccccgtgacgggccgctgcctctgccaccgcggctgg
tggggcaggaggtgctcctcgctctgcagctgccatggctccccctgcgcccaggagacc
ggccggtgcgaatgccgcacggggcagtggggggcagcctgccaggccagctgccagtgc
ctgcacgggacctgtgccccccaggacgggcggtgcacctgccacgccggctaccagggc
gacagctgcagggagccctgccctgctgggaaatacgggcttcagtgcatgcaaagctgc
ggccactgccaggacctcaaggcctgctttcccgtggacggatcgtgcccggcctgtgac
ccaggctggaacgggacccactgcaagcagccatgcccaccggggcaccatggggagaac
tgtgccctgctttgccctcctggctgccgggaaggagagagctgccacccagagacgggg
gaatgccggagctgcaaagcaggactcacaggtgccaggtgtgagctctcctgcccagag
ggcttctttggagatggatgccggtttgtctgcccagactgcttcaacgggagctgcgac
ccggcctctggggcctgcgtgtgccaggctgggttctggggtaccagctgcaactggacc
tgccctgcagggtctcacggccccaactgctcagagccctgccagtgcggaggtggcctg
tgtcaccctgtgactggggactgccagtgggggcagaaccaagcagccctcttagcagga
atcctgacccctttgattctcctcgtcctcctctgtatgtgttgctgctgctgctgctgc
tgtgagtccaccccaatggaaaccaggtcagcagctgtggagggagaccccatctcccgc
gtgaagcatcacgttctggggacattggccaacctcagccccaccttgccctgcttctcc
ttggggggctacaagctcccacgtgtgacagtctcccaccatgacgccgagatccccttc
aaccccagcttcattgagcccccgtcagccgcctggccttcggacagctccttctcctcc
tccttcgacacagatgaggaccatgaggacccagcctctcctgcccaggaagcggccagg
actaaacaccagccaggattccccccggaggagccagccttgaactcggagccctttgcc
atcccccgcacctccagcattgccaaggccaagcgcccctccgtctcctttgcagaaggg
acccggttcatctcccagagccccagaggctccacggaggccctgaaccccacctggaag
gccaaggccccctggggctcagcccgggccacctccttgcagcagcccccagcggaccct
gctgggcaggagggcctccctgcgatgggcgagtcaccggggggatgctacgagaacgtg
gagcccggtggtagggaggaagggagccacagaccgtgctcctcctcttccacgcagagg
agaagctccgggggccacaggaagcgggggaagagctcccggcatgtggcccaaagagtg
gaagccctggaggctgcctccaaagcacaggccaagagcccaggcgtcaccaccatctac
gtgaccgtgggcaaggcggggagcgaggggccggtgcaagctgtcctgcagcggctgggg
agcctgcagagggccaagcagctgcccagggaggagctgcagcagcggccaaggagaagg
agcctggagggcctcctccagaagccgccacggaggagagtgctgctggactccgagggg
gatgccgggaggctgctgccccaaggggggactggccaggaggctgccaccatgctctgt
gctgaagccagcaccccggaggaggcggctgagccccagggctttgccagggggccagga
gctcctgctggtggagagagtggcggcggcagcagcggcggcagcagcagcgagtcaccc
agcagccacagccaggctgaggtggcggctggaggaggcggaggcggccccttgctggag
aaggaagagcaagagccaaagtatgagaatgtctccgggtggtctagctctccttag
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