Zootoca vivipara (common lizard): 118097469
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Entry
118097469 CDS
T07275
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03083
Polycomb repressive complex
zvi04980
Cobalamin transport and metabolism
zvi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118097469 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118097469 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118097469 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118097469 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118097469 (HCFC1)
03029 Mitochondrial biogenesis [BR:
zvi03029
]
118097469 (HCFC1)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118097469 (HCFC1)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118097469 (HCFC1)
HMT complexes
COMPASS/SET1 complex
118097469 (HCFC1)
MLL-HCF complex
118097469 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118097469 (HCFC1)
Mitochondrial biogenesis [BR:
zvi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118097469 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
118097469
NCBI-ProteinID:
XP_034996187
LinkDB
All DBs
Position
LG16:40505377..40530476
Genome browser
AA seq
2190 aa
AA seq
DB search
MAAASAIVPSGGSPTGGGTTPGLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGG
NEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLY
ELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLN
DLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGD
LWTLDIESLTWNKPTLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWK
CTNTLACLNLDSMAWEPILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQV
CCKDLWYLETEKPPSPSRVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPAATSPAAN
PVPSVPVNPPKSPAPAAAAPVPAVQPLAQMGITLLPQTTAVAAAAGAVAAAAAAPPTTTT
IQVLPTVPSSPMPVPAAAATPRPQAVPAVLKVTGPQATTGTPLVTVRSAGQAGKGPVTVT
SLPAGVRMVVPTQNTQGTVIGSSPQMSGMAALAAAAAATQKIPPSSAPTMLSVPAGTTLV
KTVAVSPGTTTLPTTVKVASSPVMVSNPATRMLKTAAAQVGTSVSSSTTNTPTRPIITVH
KSGTVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSA
VTGQASSGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGTKPTILGISSV
SPNTTKPGTTTIIKTIPMSAIITQSGATGVTSSPGIKSPITIITTKVMTSGTGTPAKIIT
AVPKLTTSHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKG
TTGVTTLGTVTGTVSTSLAGTGGHNTNASLATPITTLGTIATLSSQVINPAAITVSAAQT
TLTAAGGLSTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTEQPTATVAI
AESGQGDAQPGTVTLVCSNPPCETHETGTTNTATTTVVGTLGGPTQVQFVCEGQEGGGLQ
PNGRVVRVCSNPPCETHETGTTNTATTVRSAGQKVCSNPPCETHETGTTNTATTSRNEKA
TADPPCQTFQTSSTSTTMTVKPIVGTGHPVCSNPPCETHETGTTNTATTSTSNMGRGQPD
GEQKEPTNPPCQTNQTNTTNTTMSAKADVPTEQPCAVRMVSFTSASGVPSVASGTTTTVQ
ASERLPAPKSLQCESHHTHTTNTATTARSLMGRGQPDGEWVGSANPPCQTQQTCSTSTTM
SAKADVPTKQPCTVKMALPDSGSSTPCETSKTGAKDSGPQGCSNSPCETHEPGTPNTTTV
STSNQGTSQPLCSNPPCETHETGTTNTSTTATSSMGTGQQVCSNPPCETHETGTTNTATT
TTSNMGAGQGEGAGQTPAAPPCETQQTSSTSTTMTSSTGGDGTHISSSTSLPVGGSESGK
APEGESPGTEGLPPQNPTARVCSNPPCETHETGTTHTATTVTSSMGSNQDQSPATNGQQG
EPESTVTESPAASSPSTVTTTVASTLPRAVTTVTQSTPPPGPSVPNISSLADTPAEEASP
PAETPAATSADSLTGASEPLQTPAEMQAAASEPQEQTHAVPTAGTPPAEAAPQPELPAPV
VETPPAPAAPAREPVTMVVLPQVTPAAAAAPPPPPPAPPSEVEQLALPQELMAESQAGTT
TLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGPGEAMDTSEAAA
TQAELGHLASESSEGQATAIPIVLTQQELAALVQQQHQLQEAQAAAVAAAAAAAQQQPPQ
HPLPSHLPTEALAPADSLNDPASESNGLNELASAVTSTVGLLPPTPTESLAPSNTFVAPQ
PVVAAASPAKLQAAAALTEVANGIEAAPVKPEPPTQPPKVVVKKENQWFDVGVVKATNMM
VTHYFLPPDDAPATEDDSGTIPDYSQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFK
TCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAIQSAQAGEPKTAAPAQ
LAFMRVYCGPSPSCLVQSASLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSK
DGSMIKPANKRPLSSPDLKTAPKKPKADGQ
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcctctgctattgtccctagtgggggctccccaacaggtggcgggaccacc
ccagggctgctccagccccgctggaagcgggtggttgggtggtcaggccccgtgcctcgg
ccccgacatgggcacagagctgtggccatcaaagagctgattgtggtcttcggagggggc
aacgagggcatcgtggatgagttgcatgtctataacacagctacaaaccagtggttcatc
ccagctgtgcggggagacatccctcctggttgtgccgcctatggcttcgtttgtgacgga
acccgcctgctggtatttggagggatggtggagtacggcaagtacagcaacgatctctat
gaactgcaggccagccgttgggagtggaagagattgaaagccaagactcctaagaatggg
cccccaccctgcccacgacttggccatagcttctcattggtgggcaacaaatgctacctg
tttgggggcttggccaatgacagcgaagaccctaagaataacattcccaggtacctgaat
gacctctatatcttggagctacgaccaggctctggtgtggtagcctgggacatccccatt
acttatggtgtactgcctccgccacgggaatcccacactgctgtggtgtacacagaaaag
gacaacaagaagtccaaactagttatatatggtggcatgagtggttgtcgtcttggtgac
ctctggacacttgacattgaatctctaacatggaacaagcccaccctgagtggggtggct
cccctcccacgcagtctgcattcagccacaactattgggaacaagatgtatgtatttgga
ggctgggtaccccttgtcatggatgatgtcaaagtggcaacacatgagaaggaatggaaa
tgcacaaataccctggcctgcctcaacctcgactctatggcttgggagcccattctgatg
gacacactagaggacaatattccacgggccagagctgggcactgtgctgtggctatcaat
acccgcttgtacatctggagtggccgcgatgggtaccgcaaagcttggaataaccaggtt
tgctgcaaggatctatggtaccttgagacagagaaacctccatcgccttcacgggtgcag
ctggttcgtgccaacaccaattccctggaagtgagctggggctctgtcccaacagctgac
acttatctgttgcagctccagaagtatgacatcccagctgccacctcgccagctgccaat
cctgtgccctcagtgcctgtcaacccccccaagagccctgctccagctgcagctgcccct
gtccctgcagtgcagcccctggcgcaaatgggcattaccctgctaccccagaccacagct
gttgcagctgctgctggtgccgtggctgctgctgctgccgccccacctaccacaaccacc
atccaggtgctgcctactgtgcctagcagcccaatgcctgtgcctgctgccgctgccact
cctcgtcctcaagctgtcccagctgtgctgaaggtcacaggcccacaagctactacgggg
actccattggtgacggtgcgttcagcagggcaggctgggaagggccctgtgacagttact
tcactgccggccggggtgcgtatggtggtacccacgcagaacactcaagggacggtgatt
ggcagtagcccccaaatgagtggcatggctgctctggcagctgctgctgctgccactcaa
aaaatcccaccatcttcagcccctacaatgctgagtgtgcctgctggcacaaccctagtt
aagactgttgctgtttcgccgggcaccaccacgctacccaccacagttaaagttgcctct
tctcccgtcatggtgagcaacccagcaacccgcatgctgaagacagccgccgctcaggtt
ggcacctcagtatcttcgtccaccaccaatacacctactcggcccatcatcaccgtgcac
aagtctggcactgtcactgtagcacagcaggcccaggtgatgactactgtggtgggaggg
gtgaccaagaccatcacattggtgaaaagtcccatctcagtgcctggaggcagtgcattg
atttccaatttgggtaaagtgatgtcagttgttcagactaaacctgttcagacatcagct
gtgacaggccaggcatcaagtggccctgtgacccagataatacagaccaaagggcccctg
cctgctggcactatcctaaagctggtgacctcagcagatggcaagcccaccacaatcatc
accacctcccaggcaggcggtacaggcaccaagcccaccattctgggcatcagcagtgtc
tctccaaatacaacaaagcctggcaccacaaccatcatcaagaccattcccatgtctgct
attattacccagtcaggtgccacaggtgtcaccagtagccctgggatcaagtctcccatc
accatcatcaccacaaaagtgatgacttctggcactgggacccctgccaagatcatcacg
gctgtacccaagctgaccacaagccacgggcagcagggtgtaacacaggtggtacttaaa
ggagccccaggtcaacctggcactatcctgcgaacagtccctatgggtggagtgcggctt
gtcacccctgtcacagtgtctgctgtcaagcctactgtcaccactttggtggtgaaagga
actacaggtgtcacaaccttgggcactgtaactggcacagtctcaaccagcctagctggg
actgggggacacaataccaatgcctccttggcgacacccattaccaccttgggcaccatt
gccacactttctagccaggtcatcaatccagctgccatcacagtctcagcagcacagacc
accttgacagcagcaggagggctgagcactcccaccatcaccatgcagcctgtgtcccag
cctactcaagtcaccctgattacgacacccagcggcgtagaggctcagccagtccatgac
ttgcccgtctctatcttggcctcacctaccacagagcagcccacagctactgttgcaatt
gctgaatcagggcagggagacgcacagccaggcaccgtcactttggtgtgctccaatcca
ccatgcgagacacacgaaacgggcaccaccaacacagccacgacgaccgtagtgggcact
ttgggtgggccgacccaggtgcagtttgtgtgtgaggggcaagagggtggtgggcttcag
cccaacgggagagtggtgcgggtatgttcaaatcctccttgtgagacccatgaaacgggc
accaccaacacagccaccaccgtgcggagtgctgggcaaaaggtgtgctccaacccgccc
tgcgaaacgcatgagactggaactaccaatacagccaccacctccaggaatgagaaggca
actgcagatccaccatgccagactttccagactagttccactagcactaccatgacagtg
aagcccattgtgggcacaggtcatccagtgtgctctaacccaccctgtgaaacccatgag
acaggaaccaccaacacagccaccacttccacctctaacatgggccgggggcagcctgac
ggtgagcagaaagaaccaaccaatccgccatgccagacaaaccagactaatacaaccaac
accaccatgtcagccaaagcagatgtgcccacggagcaaccatgtgcagtccggatggtg
agctttacttcagcttctggtgtgcccagcgttgcctctggcaccaccaccacagtgcag
gccagcgaaagactaccagctcccaaaagcctacagtgcgaatcacatcacacccacacc
accaatactgccactacggctcggtctctgatgggccgagggcagcctgacggtgagtgg
gtgggatccgccaaccctccgtgccaaacgcagcagacctgttccaccagcaccactatg
tctgccaaagcagatgtgcctacaaagcagccgtgcacagtgaagatggcattgcccgat
tcaggttcaagcacaccttgcgagaccagcaaaacaggcgccaaggattcaggcccccag
gggtgctccaattcaccttgcgagactcacgaaccgggcacccctaacacaactactgta
tccacatcaaaccagggtacctcccagccactttgctccaatccaccttgcgagactcat
gaaacgggcaccaccaacacatctacaacagccacttccagcatgggcacagggcagcaa
gtgtgctccaacccaccttgcgagactcacgagactggcaccaccaacacagcaaccacc
acaacatcaaacatgggcgcagggcagggcgaaggtgctgggcaaactcctgctgctccc
ccctgtgaaacacagcagacgagctccaccagtactactatgacgtccagcaccggaggt
gatggcacccacatttccagctcaacctctttgccggttgggggctctgaatcaggaaaa
gcccctgagggagaaagtccaggtactgagggattaccacctcagaacccaaccgccaga
gtatgctcgaatcctccttgtgagacccacgagactggaacgacccacacagccaccact
gtcacctcctccatggggtccaatcaagaccagtcacctgccaccaatggccaacagggg
gaacccgagtcaactgtgactgagagcccagctgccagtagccccagtactgttacaacc
accgttgcctccacactgcccagggctgtcaccaccgtgacacagtcaacccccccgcca
ggaccctctgtgccgaacatttcttccttggctgatactcctgcggaggaggcaagtccc
cctgctgagacaccagctgccaccagtgcagattcccttacaggagcctctgaaccactg
cagactcctgcggagatgcaggcagcagcatctgagcctcaggagcaaacccacgctgta
ccaacagcaggcaccccgccagctgaagctgctccccagccagagctcccagctcctgtg
gtggagaccccaccagcaccagcagctcctgcccgggagcctgtcaccatggtggtgctg
cctcaggtgacccctgctgctgctgctgctcctccacctccacctccagcaccaccttca
gaagtagaacagttggccctgccccaggagttgatggccgagagccaggcaggcaccacc
acactcatggtgacagggttgacgccggaggagctggcagtgactgcagctgcagaggcg
gctgcccaagctgctgctaccgaagaagcccaagccctggccatacaagcagttttgcaa
gctgcccagcaggctgtaatgggtcctggagaggccatggatacatcggaagcagcggca
acacaagcggagctcggtcacttggcctcagagagctctgagggccaggccaccgccatc
cccattgtgctcacccagcaagaactggctgccctcgtgcagcagcagcaccagcttcag
gaagctcaggcggcagcagtagccgcagcggcagcggcagctcagcaacagccacctcag
cacccgctgccttcccacttgcccacggaagccctggcccctgctgacagcctcaacgac
cccgccagtgagagtaatggtctcaacgagttggctagtgcagtcacgagtacagttggg
ctactaccccctacgcccacagagagccttgctccatctaatacttttgtggccccacag
ccagtggtggcggcggccagcccagcaaagctgcaggcggcagctgctctgactgaggtt
gccaatgggattgaagcagcgccagtgaaaccagaacctcccactcagcctccaaaggtg
gttgtgaagaaggagaatcagtggtttgatgtgggtgttgttaaagcaaccaacatgatg
gtgacacactacttcctgcctcctgatgatgcgcctgccacagaagatgactcgggcacc
atacccgattattctcaactcaagaagcaggaactgcagcctggtactgcttataaattc
cgtgtggcaggaatcaatgcctgcggccggggtccttttagtgaaatttcagcattcaag
acgtgtctgcctggcttccctggagcaccatgcgccattaaaataagcaagagtccagat
ggagcccatttgacttgggagcccccttccgtcacctctgggaagatcacggagtactct
gtgtacctggccattcagagtgcccaggcaggcgaaccgaagactgcagcccccgctcaa
ctggccttcatgcgagtttattgtgggcccagcccctcatgcctggtgcaatcagctagt
ctctccaatgcccacatagactacacaaccaagcctgccatcatcttccgcattgctgcc
cgcaacgagaagggctacggccctgccacacaagtccggtggctgcaagaatccagtaag
gatggctccatgataaaacctgccaacaagcggccgctttcctctcccgacctgaaaact
gctccaaagaagcccaaagcagatgggcagtga
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integrated database retrieval system
