Zootoca vivipara (common lizard): 118097489
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Entry
118097489 CDS
T07275
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118097489 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118097489 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118097489 (ZCCHC7)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
118097489 (ZCCHC7)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
118097489 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
118097489
NCBI-ProteinID:
XP_034996222
LinkDB
All DBs
Position
LG16:complement(23039918..23159299)
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AA seq
579 aa
AA seq
DB search
MLGEYDDIEAFEDALYCEESSSEESIDSEVEFHLYSQVHYAQGNEDAIGEEETEEHGSGQ
KQSLVSKEQKTNNFIIISDSEVTHVSDSPDVITLSDTPDEDSIYRSRRQKRTTPGAPVPG
RTYNLGELTSPKPTRHSSQFTPNSKGWTTGISKKEKRTSEKSISFHREGIRMIHKILVIE
DSSSDENADDVRSIASESDNVESWMLLGGAREDKDDNILLNLEGCGTLASEGEGGADWNI
SDKDLEARIGNYVTVRHNNRYYMPDKNVTCRNCDKRGHLSKNCPTPKKIPPCCLCSERGH
LQNNCPARFCLNCCLPGHYSRECLERTYWKKHCNRCDMRGHYADACPEIWRQYHLTTRPG
PLKQAETHVEHSASVYCYNCAEKGHYGYECSERRMFGGTFPTSPFIYYYDSRYDIKRRHQ
RVKKKVQELQDAGLVPKALKRPRIDNGQKLPGHKKKKKTLKDHDKRGDKHHKKLKKMSQA
NILKGRKDKVAQSNYNMEEDFPRGGNRDALKKSRKTRAHGTFGLPANGGKAEILQGSLER
AKKRKKKKRRNYTSGSSPRDESLFLIKQRKKKSKQKPNL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtgaatatgatgatatagaagcatttgaagatgctctctactgtgaagagtct
tctagtgaagaaagtattgatagcgaagtagaatttcacctttatagccaagtccattat
gcacaaggcaatgaggatgccattggagaagaagaaactgaagaacatggatctgggcaa
aagcagagtttagttagtaaagagcaaaaaaccaacaactttattataatttcagacagt
gaagtcactcacgtttctgatagtccagatgttatcaccttgtcagacacccctgatgaa
gacagcatttacagaagcagacgccagaagcgaacaacaccaggtgctccagtgccagga
agaacatacaatcttggagagctcacctcgccaaagcccactagacattcttctcagttt
actccaaattcaaagggatggaccacaggaatttcaaaaaaggagaaaaggactagtgaa
aagtctatctcctttcaccgtgaaggtattcgcatgatccacaagatcttagtaatagag
gacagctctagtgacgagaatgcagatgatgtgagaagcattgcctctgaaagtgataat
gtagagagctggatgctgctgggaggtgccagagaggacaaagatgacaacatcctctta
aatctcgaggggtgtggaacattagccagtgaaggagaaggtggagcagactggaacatc
agtgataaagacttagaggcacggattggcaactatgttacagtgcggcacaacaacaga
tactacatgccagacaaaaatgtcacttgcagaaattgtgataaacgaggtcacttatca
aaaaattgtcctaccccaaagaaaattccaccttgttgtctgtgttctgaaagaggtcac
ctacaaaacaactgtcctgcacgattttgtttaaattgttgtttgcctggacactactcg
agagagtgccttgagagaacgtactggaaaaaacattgtaaccgctgtgatatgagaggc
cattatgcagacgcttgcccagaaatatggaggcagtatcacctaacaaccaggccggga
ccactgaagcaggctgaaacacatgttgagcattctgcttccgtgtactgttacaactgt
gcagagaaaggccattatggatatgaatgttcagagaggcggatgtttggagggacattt
cctacttcccccttcatctattactatgatagcagatatgatatcaagaggcgtcatcag
agagtaaagaaaaaagtgcaagaacttcaggatgcaggccttgtgccaaaggctctgaag
agaccacgcatagacaatggccagaaactgcccggccataaaaagaagaagaaaacatta
aaggaccatgacaagagaggagataagcatcataaaaagctgaagaaaatgtcccaggcc
aacatactcaaaggaaggaaggataaggtggcccagagtaactataacatggaagaggac
tttcccagaggtggtaacagggatgctcttaaaaagagcaggaaaaccagagcacatggc
acctttggcctcccagcaaatggaggcaaagcagaaatccttcagggttctctggagaga
gcaaaaaagaggaagaagaagaaacggagaaactacacaagtggtagctctcccagggat
gagagtttattcctgataaaacagaggaagaagaaatcaaaacagaaacccaatttgtga
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