Zootoca vivipara (common lizard): 118097537
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Entry
118097537 CDS
T07275
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118097537 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118097537 (EXOSC8)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118097537 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118097537
NCBI-ProteinID:
XP_034996367
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Position
LG16:29219777..29235234
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AA seq
285 aa
AA seq
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MMAMAMAAAAAAAGFRTVEPLEYYRRFLKENCRPDGRDLGEFRTTTVNIGSITTADGSAL
VKLGNTTVICGIKAEFAAPPIDSSNKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFIA
DVIENSQMVQKEDLCIVEEKIAWVLYCDIICLDYDGNLLDACMCALLAALKNVYLPAVTV
NEETGLAEVNFKEKTPLTIKKQPVATSFVLLDTVIIVDPTAEEEDLATGNLTIVTDEEGK
LCSVYKPGGSVITGTKLQDCISRATVRHKEVKKLMDKMIKSVQPT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgatggcgatggcggcggcggcggccgcggctggcttcagaactgtggaacct
ttggaatattaccgaagattcttaaaagaaaactgccggcctgatggaagggatcttggt
gaattcagaaccacaactgtcaacataggttcaattacaactgcggatggctctgccctt
gtgaagctaggaaacacaacagtgatttgcggcattaaggcggaatttgcagcaccccct
attgattccagtaacaagggatatattgttcctaatgtggaccttcctccactctgttca
tcaaggtttcgacctggacctccaggggaagaggctcaggcagctagtcaattcattgca
gatgtgattgaaaattcacagatggttcagaaagaagacctgtgcattgtagaggagaag
attgcttgggttctatactgcgacattatatgcttagactatgatggaaacctcctggat
gcctgtatgtgtgctttactagcagccttaaaaaatgtctatttgcctgccgttactgta
aatgaagaaacggggttagcagaagttaacttcaaagagaagacccctttaactattaaa
aagcaaccagtggctacatcctttgtgctgcttgacacagtaataattgtggacccaact
gcagaagaggaagacctggcaactgggaatctaactattgtaactgatgaagaaggcaaa
ttgtgttctgtttataagccaggaggaagtgtaataacaggcacaaagcttcaagactgt
atcagccgggcaacagtacggcacaaagaagtgaagaaactaatggataaaatgatcaaa
agcgtacaaccaacataa
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