Zootoca vivipara (common lizard): 118097546
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Entry
118097546 CDS
T07275
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118097546 (RNF38)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118097546 (RNF38)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118097546 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
118097546
NCBI-ProteinID:
XP_034996377
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All DBs
Position
LG16:23726648..23806823
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AA seq
519 aa
AA seq
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MSSSCTRIIKTEAMIARFEYMVCVFKCIFSLSLLAGGGGASFQCQLIHQDHICTDDSDKS
EDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQPPSARPSQHHFSGERCNTPAR
NRRSPPVRRQRARRDRLSRHNSISQDENYHLPYGQQQAIEEPRAFHPPNVSPRMLHPAAH
PPQQNAVMVDIHEQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACNTQQVPGCSVVFSGQ
HLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHAPHLPPPGQFVPF
QTQQSRSPLQRIENEVELLGDHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFG
IPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPAFSFELDVEDGE
VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLL
RVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcctgtactagaatcataaagactgaagccatgatagctagatttgagtat
atggtctgtgttttcaaatgcattttttccctttctttacttgcaggtggtggtggtgct
tccttccagtgccagttaatccatcaagaccacatctgtacagatgacagtgacaagagt
gaagatagtccaagtcccaagagacagcgtctttctcattcagtgtttgactatacagca
gcatcaccagccccatcaccaccaatgcgaccatgggagatgacatcaaataggcagcct
ccttcagctcgaccaagccaacatcacttctcaggggaacgctgcaacacacctgcacgc
aacagaaggagccctcccgttagacgccagagagcaagaagagatcgattatctcgacat
aattccattagtcaagatgagaactaccatctcccctacggacaacaacaagcaatagaa
gaaccccgagccttccaccctccgaatgtatctccccgtatgttgcacccagctgctcat
ccaccacagcaaaacgcagtgatggttgacattcatgaacagatccaccagggcacagtc
cctgtttcatacacggtgaccacggtggcaccacatgggattccactttgcacaggtcag
cacataccagcttgcaacacacagcaggtccctgggtgttccgtggttttcagtggacag
catcttcctgtctgcagtgtgcctcccccaatgcttcaggcatgttctgttcaacactta
ccagttccatacgcggcattcccacctctcatttctagtgatccgtttcttttgcatcct
ccacacctctccccacatcatgctccacacctgccacctccaggccagttcgttcccttt
cagacacaacagtcgcggtcgcctcttcaaaggatagagaatgaagtagagttgcttgga
gaccatcttcctgtaggaggtttcacctatccgccttcagcccacccaccaacattgcct
ccctcagccccactgcagttcttaacgcatgaccctttgcaccaagaggtgtcctttgga
ataccttacccgcctttcatgcctcgaagactcacaggacgcagcagatatcgatctcaa
cagccaataccgccacctccttaccatcccagcctattgccatatgtgctatcaatgctt
ccagtgccacccgcagttggcccagccttcagttttgagctggatgtagaagacggcgag
gtggaaaactatgaggcactgctgaacttggccgaaagactgggagaggccaaaccgaga
ggactgacaaaagcagatattgaacaacttccatcttacagattcaacccaaataaccat
cagtcagaacagactctgtgtgtggtgtgcatgtgcgactttgaatcaaggcaactactt
agagttttaccgtgtaaccatgagttccatgccaagtgtgtcgataaatggcttaaggca
aatcgtacttgccccatctgcagagctgatgcttcggaagtccaccgtgactcagaatga
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