Zootoca vivipara (common lizard): 118097614
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Entry
118097614 CDS
T07275
Symbol
FOCAD
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118097614 (FOCAD)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118097614 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
118097614
NCBI-ProteinID:
XP_034996554
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All DBs
Position
LG16:complement(1691760..1798212)
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AA seq
1802 aa
AA seq
DB search
MSEEIRKRLDFPNTLIQSQTVGHLVAAVLKENVSSNKISQSTNQTPALNLLWEKCCSDNV
VVRTSCCEALVTLVSQDHAELSYVLNGALNLIPSARNVHGLIKILVKLLQRQALKETRSE
KDPLGETYAIRNSPHPLITVLENRPDCWPALLQQMTAFFQQCPESAENSCVCVMRPFLRY
LYCEPCQLREHAELRMALLGVLLQPRGPQNKEEPCALERHLLQLLCDLVPHYQLKDLPQV
TEKLLCLEQLFRSLQRHPAFWKAQLRQLCLQLLCICEVCLQITGECSSVVCLLEENAELL
KEGFPSEVAIIGLGLLLLQAPATQQKPILKLAIKLLSCSETTMTLAVAPILAMPALQILS
STAVQGSAIEEDGGPTRQQLAINLLEIVQREELQEEKKQPASSDPFFPMASAYGSLHTTW
KLLGLLRETSSVSDWLSSLKSVLPITTQVPAHVVLLLAYLLVQENGDCLRDVLAATTELA
KADSSQVPNLIPVLMFKLGTRLEPTLCREILYTLPALGVHKVCVAQILRALQVLGKTPEL
QAVALRLMTSLWEKQDRVYPELQRFMAMLDMASLSVGKDTQWEKVIAKAASIRDICKQRP
YQHGADMLAAISQVLNECTKPDQATPAVLVLQGLHALCQAEVVCIRSTWNALSPKLSCDT
RPLILKTLSELFSLVPSLTVNSNEYEKFKVQVVSFLWSHTQSKDPLVATSAYKSLSEFSS
EEHIVLHLPEQARPELPQPEEGGVNEEEEEEEEEVDLSVPGASYIKLLMLTPPPVLPAFE
EFAASLVKQEMASMPRGIYHSALRGGAFRSDRGKAVSGVPSFMLKMYERNKQPGLKPGLA
AGILLSYDLPIHVGKDGKPISRFLASRGRSFHQMLTALLHEVNIQPSEWHRSLLLPQSWA
GFMERTYHAILQGRQAELELQLKHGKEGPEEVQYKQFTAWLWVRDMLTDVIKGASKESPV
VKGNCILALTGLAVAVAKHEKGLSSDSEEQFNTEVDFLLTNHWIGMVIDTLLSIIDSRYR
PKGRVFPWFYQKSYSGENTASVIARSCAATALSLLVPVFIASYKEKVEEVVNLMVAMLPG
KPNADESQAVQIHMGLALGMFVSRLCEEKVSDVSGKQMDLLLVKSLDALEGCCFDTSLEY
NTGCILGVGLVLSLMCRSSPSEGQAAISASLDKLSKYLDGAEDQSRTFQEILAYAVACVC
ISAFSVKIIEATEAEEIMNKLQKLAETNQQTPGFALALGNIVHGLSASGHGKAEDLGNRL
FPAWMKIVLAEGGPTMQRLAAIHGLVSVVGSEGAMIQLKTESIQSSQFQSKLNEVIRILS
QIISFSGVIGLQTNAAWLLGHLHLSTVSSTHSRTSVPPDFSYLPEKSFLRAAIDFVIESG
KKGPEQIRPHLVKAAMAPIALNGASYLYPPVNWASILSPLLRLNFGEEIQQLCLEVAVTQ
AQSSQNAAMLLGMWVAPPLVCSLSAQAKRYLFTSLPVWMKHVAEDRLQAFTEVFMVQHFE
AKNQPQYLDLCWSILQGLSQAMKLPSSAQYSWSCLCRTAERIFELLPNGIRQTEVKMYIH
AAKCLSEMADTEIDRITQVSKNNLEKVTFAKVYIVSQGRFPLLRWNDVINIAAGCQQKET
IVWLLLQSFYHARIVSHENTGVLKRMAWLLELMGYIKNISLKTTSIQNVAPKEAVSFLLW
IFAASVVAWGDHSAPLLLGLSAGWEKEESSALPANYLGKRPGDNLAAQETLTLFPGSLQS
LLAKEPWKEQTSKFIDWLFNLMENSDDVLSQPSRNLLKASLLALRSLPEFRKKAVWTKAY
GW
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaatcaggaagagacttgatttccctaacacccttatacagtcacagacg
gtgggccatcttgtcgctgctgtgctgaaagaaaacgtttcgtctaacaagataagccag
tccactaaccagacccctgccttaaacttgctctgggaaaagtgctgcagtgacaacgtg
gttgtccgaacctcgtgttgtgaggctctggtgacgctcgtctcccaggatcacgcagag
ctcagttatgttctcaacggagctctcaacctgattccttctgccaggaatgtccacggt
ttgataaaaatccttgtcaaactgctgcagaggcaggccttgaaggagaccagaagtgaa
aaggatccgttgggggagacctatgccatcaggaactctcctcatcccttgatcaccgtt
cttgagaacagacctgactgctggccggctctcctgcagcagatgacagcctttttccag
cagtgtccagagagcgcggagaattcatgtgtctgtgtaatgagacctttcctacgatat
ctgtactgtgaaccttgccagctgagggaacatgcggaattacgaatggctctgcttgga
gttttgcttcagccgcgtgggcctcagaacaaggaggaaccttgtgcccttgagcgccat
ctcctccagctgctttgtgacttggttccacattatcagctaaaagacctgccacaggtc
acagaaaagctgctgtgtttggagcagctgttccgaagtctgcagcgccaccccgctttt
tggaaagcccagttgcgccagctctgcctgcaacttttatgcatctgcgaggtttgcctg
cagatcactggggagtgttcgtccgtggtttgcttactggaagaaaatgctgagctgctg
aaagagggctttccatcggaggtggccataattggattaggtttgctactgcttcaggct
ccagccactcagcaaaaaccaatcttaaagctagccatcaagctcctttcctgctctgaa
actacgatgactcttgccgtagcccccatcctggcaatgcccgctctgcagatcttgtct
tccaccgccgtgcagggcagcgcgatcgaggaagacggtggccctactcggcagcagctg
gccattaatcttttagaaatcgtgcagcgagaagaattgcaggaagagaaaaagcaaccg
gcctcttctgaccctttcttccccatggccagtgcttatggttcattgcacacgacctgg
aagctcttggggctcctgagagagacgtcctccgtttccgactggctgtcttctcttaaa
tccgtgctgcccattacaacgcaagtccctgctcacgtggtccttttgctggcttacctc
ctcgttcaagaaaacggagactgccttcgtgacgtattagctgccactacagaacttgcc
aaagcagattcatcccaggtgccaaatctgattcccgtcctgatgtttaagttggggacg
cggctggagcccaccctgtgccgggaaatcttgtatactttgcctgctttgggcgttcat
aaggtctgcgtggcgcagattttacgtgccctacaggtgttgggaaagacgccagagctt
caagctgttgcattacgcctgatgacatctttatgggagaagcaggatcgtgtttaccca
gaactgcagcgattcatggcaatgttggatatggcttccttatctgttggcaaagatact
cagtgggagaaggtgattgctaaagctgcttctatccgagatatatgcaagcaaaggcct
taccaacatggagcggatatgttggctgccatttcccaggtgctgaatgaatgcacaaag
cctgaccaagccactcccgctgtcctcgtcttgcaaggtcttcacgccctttgtcaggcg
gaggttgtctgcattcgctctacgtggaacgccctctcgccaaagctgagctgcgacacc
cggccactcattttgaaaaccctgagcgaactgttctctcttgtgccttccttaacggtg
aactcaaacgagtacgagaaattcaaagttcaagtcgtcagcttcctgtggagccacaca
cagagcaaggatccacttgtagccacatcagcgtacaaatctctctctgaatttagctca
gaagaacacatcgttctccatcttcccgaacaggcaagaccagaattgccccaaccagaa
gaggggggtgtaaatgaagaggaggaggaggaagaggaagaggtggatctctctgttcct
ggtgcctcctatatcaaattgttgatgctgactcctcctcccgttctgccagcgtttgaa
gagtttgcggcatcgctcgtgaaacaggagatggccagcatgcctcgtggaatataccat
tccgcactgagaggcggtgctttccggtcggaccgagggaaggcggtatcaggcgtgcca
agcttcatgctgaaaatgtacgagagaaacaagcagcccgggctgaagcctggccttgca
gctggcatattgctgagttacgatcttccaatccacgtggggaaggatgggaaacctatc
agccgatttctagccagtaggggacgcagtttccaccagatgttaaccgctctcctccac
gaggtcaacattcagccttctgagtggcatcgctctctgctacttccccagtcctgggcc
ggatttatggagagaacctaccatgcaattctacaaggaaggcaggccgagctggagctg
cagttaaaacacggcaaggagggacccgaagaagtgcagtacaagcagttcacagcctgg
ctctgggtcagagatatgctgacggatgtgatcaagggcgcttccaaggaaagtccagtg
gtcaagggaaattgtattctagccttaacaggccttgcagttgcggtagccaagcacgag
aaagggctttcttcagacagcgaagaacaattcaataccgaggtggactttcttctgaca
aaccattggatcggcatggtgattgatacccttcttagcatcatagacagtcgctatcgc
cccaagggtcgagtcttcccatggttctatcagaaatcctactctggtgaaaacactgct
agtgttattgctcgttcctgtgcagcgactgctttgtctctcttggtgccggtttttatt
gcctcctacaaggagaaggtggaggaagtcgtgaatttgatggttgccatgttacctggg
aaaccaaatgcagatgagtctcaagctgttcaaattcacatgggccttgctttggggatg
tttgtctcacggttatgtgaagagaaagtcagtgatgtctctggaaaacaaatggatctg
ctgttggtgaagtccttggatgccttagagggctgctgctttgacacaagcctggagtac
aacaccgggtgcatcttgggtgtcgggcttgttctgtcgctgatgtgtcgcagcagccca
tcggaaggccaggctgccatctctgcctccctggataaactgagcaaatacttggatggg
gcagaagaccaaagcagaacgtttcaggagattcttgcctatgcggttgcctgtgtctgc
atttctgcttttagtgttaagatcatcgaggccacggaggcagaggagatcatgaacaag
ctgcagaaattagcagaaaccaatcagcagacacctgggtttgccttagcattggggaac
attgttcacggattgtctgcaagtggacatggcaaagcggaagacctcggcaacaggctg
tttcctgcatggatgaaaattgttcttgcagagggaggtcctacaatgcaaaggcttgca
gcgatccatgggctggtttctgtggtgggttctgaaggagccatgatacagctgaaaact
gagtccatccagtcttcccagtttcagagcaaacttaatgaggtcatcagaatcctgagt
cagataatcagcttttctggcgtgatcggccttcagacaaacgcagcgtggctattggga
catctgcatctctccactgtttcctcaacccacagtcgaacatctgttccgccagacttt
agctacctgcctgagaaaagtttcctgagggcagccatcgactttgttatcgaaagtggg
aagaaaggccctgaacaaattcgacctcacttggtcaaagcagctatggctcccatagca
ttgaatggagcaagctacctgtacccacctgtgaactgggcgtcaattctttcccctctc
ctgaggctaaattttggagaagagatacagcagctgtgcctcgaagtagctgtgacccag
gcccagtcgtcgcagaacgctgccatgcttttggggatgtgggtagccccgcctctcgtc
tgcagtctaagcgcacaagccaagagataccttttcacgtccttacctgtgtggatgaaa
catgtagcggaagacagattgcaggctttcacagaagtcttcatggtgcagcattttgaa
gccaaaaaccagccgcaatacctggatctttgctggagtattttgcaagggctcagccaa
gccatgaaactgcctagctcggcccaatacagctggagctgcctttgcaggactgcggag
aggatatttgaacttctgccaaatgggattcggcaaactgaagtgaagatgtatatacac
gcagcgaaatgtctctcggaaatggcagacacagaaattgaccgaattacccaggtttca
aagaacaatttagaaaaggtcacatttgccaaagtttatatagtttcccaaggcagattt
cctttgctgagatggaacgacgtgattaatattgccgctggctgccagcagaaagaaacc
attgtgtggctgcttctgcagagcttctaccatgcgagaattgtgagccacgaaaacaca
ggagtcttaaagagaatggcatggctcttggaactgatgggatatattaaaaacatttcc
ttgaagacaacatccatacaaaatgtggctccaaaggaggcggtcagcttcctgttgtgg
atctttgctgcctccgtggtggcctggggtgaccactctgcaccgctgctgcttggcctc
agtgccggctgggaaaaggaagaaagctcagcgttgcctgcaaattatttgggcaagcgc
ccaggagataatctggctgcgcaagagaccctcactcttttcccaggcagcctgcagagt
ctgttggctaaagagccttggaaggaacaaacatcaaagttcattgactggctatttaac
ctgatggagaactcagacgatgtgctatcccagccttctaggaatcttttgaaagcatct
ctgctggctctgcggtctctcccagagttcaggaagaaggcagtatggacaaaggcttat
ggctggtag
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integrated database retrieval system