KEGG   Zootoca vivipara (common lizard): 118097614
Entry
118097614         CDS       T07275                                 
Symbol
FOCAD
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
zvi  Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zvi03019]
    118097614 (FOCAD)
Messenger RNA biogenesis [BR:zvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     118097614 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 118097614
NCBI-ProteinID: XP_034996554
LinkDB
Position
LG16:complement(1691760..1798212)
AA seq 1802 aa
MSEEIRKRLDFPNTLIQSQTVGHLVAAVLKENVSSNKISQSTNQTPALNLLWEKCCSDNV
VVRTSCCEALVTLVSQDHAELSYVLNGALNLIPSARNVHGLIKILVKLLQRQALKETRSE
KDPLGETYAIRNSPHPLITVLENRPDCWPALLQQMTAFFQQCPESAENSCVCVMRPFLRY
LYCEPCQLREHAELRMALLGVLLQPRGPQNKEEPCALERHLLQLLCDLVPHYQLKDLPQV
TEKLLCLEQLFRSLQRHPAFWKAQLRQLCLQLLCICEVCLQITGECSSVVCLLEENAELL
KEGFPSEVAIIGLGLLLLQAPATQQKPILKLAIKLLSCSETTMTLAVAPILAMPALQILS
STAVQGSAIEEDGGPTRQQLAINLLEIVQREELQEEKKQPASSDPFFPMASAYGSLHTTW
KLLGLLRETSSVSDWLSSLKSVLPITTQVPAHVVLLLAYLLVQENGDCLRDVLAATTELA
KADSSQVPNLIPVLMFKLGTRLEPTLCREILYTLPALGVHKVCVAQILRALQVLGKTPEL
QAVALRLMTSLWEKQDRVYPELQRFMAMLDMASLSVGKDTQWEKVIAKAASIRDICKQRP
YQHGADMLAAISQVLNECTKPDQATPAVLVLQGLHALCQAEVVCIRSTWNALSPKLSCDT
RPLILKTLSELFSLVPSLTVNSNEYEKFKVQVVSFLWSHTQSKDPLVATSAYKSLSEFSS
EEHIVLHLPEQARPELPQPEEGGVNEEEEEEEEEVDLSVPGASYIKLLMLTPPPVLPAFE
EFAASLVKQEMASMPRGIYHSALRGGAFRSDRGKAVSGVPSFMLKMYERNKQPGLKPGLA
AGILLSYDLPIHVGKDGKPISRFLASRGRSFHQMLTALLHEVNIQPSEWHRSLLLPQSWA
GFMERTYHAILQGRQAELELQLKHGKEGPEEVQYKQFTAWLWVRDMLTDVIKGASKESPV
VKGNCILALTGLAVAVAKHEKGLSSDSEEQFNTEVDFLLTNHWIGMVIDTLLSIIDSRYR
PKGRVFPWFYQKSYSGENTASVIARSCAATALSLLVPVFIASYKEKVEEVVNLMVAMLPG
KPNADESQAVQIHMGLALGMFVSRLCEEKVSDVSGKQMDLLLVKSLDALEGCCFDTSLEY
NTGCILGVGLVLSLMCRSSPSEGQAAISASLDKLSKYLDGAEDQSRTFQEILAYAVACVC
ISAFSVKIIEATEAEEIMNKLQKLAETNQQTPGFALALGNIVHGLSASGHGKAEDLGNRL
FPAWMKIVLAEGGPTMQRLAAIHGLVSVVGSEGAMIQLKTESIQSSQFQSKLNEVIRILS
QIISFSGVIGLQTNAAWLLGHLHLSTVSSTHSRTSVPPDFSYLPEKSFLRAAIDFVIESG
KKGPEQIRPHLVKAAMAPIALNGASYLYPPVNWASILSPLLRLNFGEEIQQLCLEVAVTQ
AQSSQNAAMLLGMWVAPPLVCSLSAQAKRYLFTSLPVWMKHVAEDRLQAFTEVFMVQHFE
AKNQPQYLDLCWSILQGLSQAMKLPSSAQYSWSCLCRTAERIFELLPNGIRQTEVKMYIH
AAKCLSEMADTEIDRITQVSKNNLEKVTFAKVYIVSQGRFPLLRWNDVINIAAGCQQKET
IVWLLLQSFYHARIVSHENTGVLKRMAWLLELMGYIKNISLKTTSIQNVAPKEAVSFLLW
IFAASVVAWGDHSAPLLLGLSAGWEKEESSALPANYLGKRPGDNLAAQETLTLFPGSLQS
LLAKEPWKEQTSKFIDWLFNLMENSDDVLSQPSRNLLKASLLALRSLPEFRKKAVWTKAY
GW
NT seq 5409 nt   +upstreamnt  +downstreamnt
atgtcagaagaaatcaggaagagacttgatttccctaacacccttatacagtcacagacg
gtgggccatcttgtcgctgctgtgctgaaagaaaacgtttcgtctaacaagataagccag
tccactaaccagacccctgccttaaacttgctctgggaaaagtgctgcagtgacaacgtg
gttgtccgaacctcgtgttgtgaggctctggtgacgctcgtctcccaggatcacgcagag
ctcagttatgttctcaacggagctctcaacctgattccttctgccaggaatgtccacggt
ttgataaaaatccttgtcaaactgctgcagaggcaggccttgaaggagaccagaagtgaa
aaggatccgttgggggagacctatgccatcaggaactctcctcatcccttgatcaccgtt
cttgagaacagacctgactgctggccggctctcctgcagcagatgacagcctttttccag
cagtgtccagagagcgcggagaattcatgtgtctgtgtaatgagacctttcctacgatat
ctgtactgtgaaccttgccagctgagggaacatgcggaattacgaatggctctgcttgga
gttttgcttcagccgcgtgggcctcagaacaaggaggaaccttgtgcccttgagcgccat
ctcctccagctgctttgtgacttggttccacattatcagctaaaagacctgccacaggtc
acagaaaagctgctgtgtttggagcagctgttccgaagtctgcagcgccaccccgctttt
tggaaagcccagttgcgccagctctgcctgcaacttttatgcatctgcgaggtttgcctg
cagatcactggggagtgttcgtccgtggtttgcttactggaagaaaatgctgagctgctg
aaagagggctttccatcggaggtggccataattggattaggtttgctactgcttcaggct
ccagccactcagcaaaaaccaatcttaaagctagccatcaagctcctttcctgctctgaa
actacgatgactcttgccgtagcccccatcctggcaatgcccgctctgcagatcttgtct
tccaccgccgtgcagggcagcgcgatcgaggaagacggtggccctactcggcagcagctg
gccattaatcttttagaaatcgtgcagcgagaagaattgcaggaagagaaaaagcaaccg
gcctcttctgaccctttcttccccatggccagtgcttatggttcattgcacacgacctgg
aagctcttggggctcctgagagagacgtcctccgtttccgactggctgtcttctcttaaa
tccgtgctgcccattacaacgcaagtccctgctcacgtggtccttttgctggcttacctc
ctcgttcaagaaaacggagactgccttcgtgacgtattagctgccactacagaacttgcc
aaagcagattcatcccaggtgccaaatctgattcccgtcctgatgtttaagttggggacg
cggctggagcccaccctgtgccgggaaatcttgtatactttgcctgctttgggcgttcat
aaggtctgcgtggcgcagattttacgtgccctacaggtgttgggaaagacgccagagctt
caagctgttgcattacgcctgatgacatctttatgggagaagcaggatcgtgtttaccca
gaactgcagcgattcatggcaatgttggatatggcttccttatctgttggcaaagatact
cagtgggagaaggtgattgctaaagctgcttctatccgagatatatgcaagcaaaggcct
taccaacatggagcggatatgttggctgccatttcccaggtgctgaatgaatgcacaaag
cctgaccaagccactcccgctgtcctcgtcttgcaaggtcttcacgccctttgtcaggcg
gaggttgtctgcattcgctctacgtggaacgccctctcgccaaagctgagctgcgacacc
cggccactcattttgaaaaccctgagcgaactgttctctcttgtgccttccttaacggtg
aactcaaacgagtacgagaaattcaaagttcaagtcgtcagcttcctgtggagccacaca
cagagcaaggatccacttgtagccacatcagcgtacaaatctctctctgaatttagctca
gaagaacacatcgttctccatcttcccgaacaggcaagaccagaattgccccaaccagaa
gaggggggtgtaaatgaagaggaggaggaggaagaggaagaggtggatctctctgttcct
ggtgcctcctatatcaaattgttgatgctgactcctcctcccgttctgccagcgtttgaa
gagtttgcggcatcgctcgtgaaacaggagatggccagcatgcctcgtggaatataccat
tccgcactgagaggcggtgctttccggtcggaccgagggaaggcggtatcaggcgtgcca
agcttcatgctgaaaatgtacgagagaaacaagcagcccgggctgaagcctggccttgca
gctggcatattgctgagttacgatcttccaatccacgtggggaaggatgggaaacctatc
agccgatttctagccagtaggggacgcagtttccaccagatgttaaccgctctcctccac
gaggtcaacattcagccttctgagtggcatcgctctctgctacttccccagtcctgggcc
ggatttatggagagaacctaccatgcaattctacaaggaaggcaggccgagctggagctg
cagttaaaacacggcaaggagggacccgaagaagtgcagtacaagcagttcacagcctgg
ctctgggtcagagatatgctgacggatgtgatcaagggcgcttccaaggaaagtccagtg
gtcaagggaaattgtattctagccttaacaggccttgcagttgcggtagccaagcacgag
aaagggctttcttcagacagcgaagaacaattcaataccgaggtggactttcttctgaca
aaccattggatcggcatggtgattgatacccttcttagcatcatagacagtcgctatcgc
cccaagggtcgagtcttcccatggttctatcagaaatcctactctggtgaaaacactgct
agtgttattgctcgttcctgtgcagcgactgctttgtctctcttggtgccggtttttatt
gcctcctacaaggagaaggtggaggaagtcgtgaatttgatggttgccatgttacctggg
aaaccaaatgcagatgagtctcaagctgttcaaattcacatgggccttgctttggggatg
tttgtctcacggttatgtgaagagaaagtcagtgatgtctctggaaaacaaatggatctg
ctgttggtgaagtccttggatgccttagagggctgctgctttgacacaagcctggagtac
aacaccgggtgcatcttgggtgtcgggcttgttctgtcgctgatgtgtcgcagcagccca
tcggaaggccaggctgccatctctgcctccctggataaactgagcaaatacttggatggg
gcagaagaccaaagcagaacgtttcaggagattcttgcctatgcggttgcctgtgtctgc
atttctgcttttagtgttaagatcatcgaggccacggaggcagaggagatcatgaacaag
ctgcagaaattagcagaaaccaatcagcagacacctgggtttgccttagcattggggaac
attgttcacggattgtctgcaagtggacatggcaaagcggaagacctcggcaacaggctg
tttcctgcatggatgaaaattgttcttgcagagggaggtcctacaatgcaaaggcttgca
gcgatccatgggctggtttctgtggtgggttctgaaggagccatgatacagctgaaaact
gagtccatccagtcttcccagtttcagagcaaacttaatgaggtcatcagaatcctgagt
cagataatcagcttttctggcgtgatcggccttcagacaaacgcagcgtggctattggga
catctgcatctctccactgtttcctcaacccacagtcgaacatctgttccgccagacttt
agctacctgcctgagaaaagtttcctgagggcagccatcgactttgttatcgaaagtggg
aagaaaggccctgaacaaattcgacctcacttggtcaaagcagctatggctcccatagca
ttgaatggagcaagctacctgtacccacctgtgaactgggcgtcaattctttcccctctc
ctgaggctaaattttggagaagagatacagcagctgtgcctcgaagtagctgtgacccag
gcccagtcgtcgcagaacgctgccatgcttttggggatgtgggtagccccgcctctcgtc
tgcagtctaagcgcacaagccaagagataccttttcacgtccttacctgtgtggatgaaa
catgtagcggaagacagattgcaggctttcacagaagtcttcatggtgcagcattttgaa
gccaaaaaccagccgcaatacctggatctttgctggagtattttgcaagggctcagccaa
gccatgaaactgcctagctcggcccaatacagctggagctgcctttgcaggactgcggag
aggatatttgaacttctgccaaatgggattcggcaaactgaagtgaagatgtatatacac
gcagcgaaatgtctctcggaaatggcagacacagaaattgaccgaattacccaggtttca
aagaacaatttagaaaaggtcacatttgccaaagtttatatagtttcccaaggcagattt
cctttgctgagatggaacgacgtgattaatattgccgctggctgccagcagaaagaaacc
attgtgtggctgcttctgcagagcttctaccatgcgagaattgtgagccacgaaaacaca
ggagtcttaaagagaatggcatggctcttggaactgatgggatatattaaaaacatttcc
ttgaagacaacatccatacaaaatgtggctccaaaggaggcggtcagcttcctgttgtgg
atctttgctgcctccgtggtggcctggggtgaccactctgcaccgctgctgcttggcctc
agtgccggctgggaaaaggaagaaagctcagcgttgcctgcaaattatttgggcaagcgc
ccaggagataatctggctgcgcaagagaccctcactcttttcccaggcagcctgcagagt
ctgttggctaaagagccttggaaggaacaaacatcaaagttcattgactggctatttaac
ctgatggagaactcagacgatgtgctatcccagccttctaggaatcttttgaaagcatct
ctgctggctctgcggtctctcccagagttcaggaagaaggcagtatggacaaaggcttat
ggctggtag

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