KEGG   Zootoca vivipara (common lizard): 118097725
Entry
118097725         CDS       T07275                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
zvi  Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zvi03041]
    118097725 (SMU1)
Spliceosome [BR:zvi03041]
 Complex B
  Other components
   Complex B specific factors
    118097725 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_IP5PC_F DUF7165 TFIIIC_delta KNTC1_N VPS8_N Beta-prop_NOL10_N PROPPIN LisH zf_topless
Other DBs
NCBI-GeneID: 118097725
NCBI-ProteinID: XP_034996787
LinkDB
Position
LG16:21671489..21689070
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKVWNMKTTECCNTFKSLGSTAGTDITVNSVVLLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgagtcttcggatgttatccgactgattatgcagtacctgaaggag
aacagtttgcaccgtgccttggccactctacaggaagagaccaccgtgtcactgaacaca
gtggacagcattgagagttttgttgcagatattaacagtggccattgggacacagtgctg
caggcaatacagtcattaaaactaccagataaaacccttattgatctgtatgagcaggta
gttttggagttgatagagcttcgtgaattgggggctgccaggtctctcctgagacaaact
gacccgatgatcatgctaaaacagacccagccagagcgttacatccaccttgaaaacctt
ttggccaggtcctattttgatcctcgtgaggcatacccagatgggagcagcaaagagaag
cggagagctgctattgcccaagccttggctggtgaagtcagtgttgtgcctccatctcgt
cttatggcattgctgggacaggcactgaaatggcaacagcatcaaggactccttcctcct
ggtatgacaattgatttgttccgaggcaaagcagctgtcaaagatgttgaagaggaaaag
ttccccacacaactgagtaggcatattaagtttggccagaagtctcatgtggagtgtgct
cgattttccccagatggtcaatatctagtcactggctctgttgatgggttcattgaagta
tggaacttcaccaccggcaaaatcaggaaggatctgaagtaccaagctcaggataacttt
atgatgatggatgatgcggttctatgcatgtgtttcagtagggatacggaaatgctagca
accggagcacaggatgggaagatcaaggtttggaagattcagagtgggcagtgtctgagg
cgattcgaaagagcacacagcaaaggtgttacctgcctgagtttttcaaaggacagcagt
cagattcttagtgcctcttttgaccagacaatcaggattcatggcttgaagtctggcaag
actctcaaagaattccgtggtcattcgtcatttgttaacgaagccacatttacacaggat
gggcattacattatcagcgcatcttcggatggcactgtgaaggtttggaatatgaagact
acagagtgttgtaacactttcaaatcactcggcagcacagctgggacagacatcaccgtc
aacagtgtggttttgctgcctaagaatccggaacactttgttgtttgtaacagatcaaat
acagttgtcattatgaacatgcaggggcagattgtgagaagcttcagctctggtaagagg
gaaggtggtgactttgtctgctgtgccctttctccacgaggcgagtggatctactgtgtg
ggtgaagactttgtgctgtactgtttcagcacagtgactggcaagctggagagaacattg
acggttcacgaaaaggatgttattggtatcgctcaccatccccaccagaacttgattgct
acctatagtgaagatgggctgctgaaactctggaaaccataa

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