Zootoca vivipara (common lizard): 118097759
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Entry
118097759 CDS
T07275
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118097759 (SHOC1)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118097759 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
118097759
NCBI-ProteinID:
XP_034996861
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Position
LG16:complement(13290627..13313791)
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AA seq
726 aa
AA seq
DB search
MQKHEVNPKIKELHHQMSKWVQSNMNDQNKVVIVTRMGFDEETDVLINTISTVQGLKIVY
LDSEERGTFLESQDVISSLERSSCVVVYNQNIGPDFPWTHFSLVVEYNYSEKSCWLDNCK
NLNVSYITFITAVPETFGIEEVSPDNFGCVLLELPIPYVFLTSEGLLSTPEILQLLESKY
NITFIERKCCEALQFFGSTDRYIVMTVDECTAIVIQNMEELGYEKSSDSIVLRLVVLSLQ
YSSCWIILYSQERLNSEYSLAGKTLHHLTLIYAALVSFAQKSEDFDVKVVLTPGVEETAL
LVRQIADHILMTSQRHPQEWLDKSWLSVLPSEEEKSLFTFPCMNPLVAQVMLKKSSSLEW
LLSATFDQLHALLPEVPEKVLKHFSDITSLYILNPPAKPKLPEETVSIQNNIKGSISSCY
EIPFPKAVLSGFQGHNPFTECFGNYGEVHNSKKCSPVYYQNESYTPLKSGGKHSSLRALY
QEKVCSLRDNTGIEQQQYIPFAKKMEVEKRTTSSLLPPDDLKGCPHINFEATMPYLAYNL
GGTNTYLENGAQNRMYCSKAAGQKLAHQDIENVLEVKKQPLVKQCKSSKDSKSSWHLVSG
REDCPIQQSSLSFLGELGATGYSGPKFQFEEMFWGNQSSVLAMDSSPHDSSFSKALSTPD
RFFNLDFPITGEYTRKKSPNVLSSNRRECVSAAGLKCTQLPQLKKRRLTYEKDPGRSDGQ
TRLKFL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcatgaagtcaatcccaagataaaagagctgcatcatcaaatgtccaaatgg
gtgcagagtaatatgaatgatcagaataaggtagtaattgtgactagaatgggttttgat
gaagaaacagatgtgctaatcaacaccatcagtacagtgcaaggcttgaaaattgtgtat
ttagattctgaggaaagagggacttttctagagagccaagatgtaataagtagtttggaa
agatcctcttgtgtggttgtatataatcagaatattggacctgatttcccttggactcat
ttttcattagtggtggagtataattattcagaaaaatcctgctggcttgataattgcaaa
aatctgaatgtttcttacataactttcataactgctgttccagaaacatttgggattgaa
gaggtttctccagataattttgggtgtgttctcctggaactgccaattccatatgttttt
ctgacatctgagggccttctcagtaccccagaaatccttcagttactggagtccaagtac
aatattacatttattgagaggaagtgctgtgaggcattacagttctttggaagcacggac
cgttacatcgtgatgactgtagatgaatgcactgctatcgttattcagaacatggaagaa
cttggttatgaaaaatcttctgatagtattgtgttacggcttgtggtgctgtcactccag
tacagctcctgttggattattttatactcccaagaaagattaaattcagagtatagctta
gctggaaagaccctgcatcacctaaccttgatttatgcagccttggtttcatttgcacag
aagtcagaagactttgatgtaaaggtggttcttacaccaggagttgaagagacagccctt
ttggttcgtcagattgctgaccacattttgatgacttctcaaagacatcctcaggaatgg
ctagacaaatcttggctttccgtcttgccgtcagaggaagagaaatccttgtttacattt
ccgtgcatgaatcctctagtggctcaagtcatgttaaagaaaagctcttcactggagtgg
cttctgtcagcaacttttgaccagcttcatgcacttctgcctgaagtgcctgagaaagtt
ctgaagcactttagtgacatcacatcactgtacatcttgaaccctccagcaaagccaaaa
cttccagaagaaactgtgtcaattcaaaataacataaagggctctatcagctcttgctat
gaaattccctttcccaaggcagtgttatctggctttcaaggacacaatccctttactgaa
tgttttggaaactacggtgaagtacacaacagcaaaaaatgttccccagtttactaccaa
aatgagtcttatactcctctgaaatcaggtggaaagcacagcagcttaagggcactatac
caggaaaaagtttgttccttacgggataatacaggcatagagcagcaacagtacattcca
ttcgcgaaaaaaatggaagtggaaaaaagaacaacttcatcactgctaccaccagatgat
ctgaaaggatgtccccatattaactttgaagctacaatgccatatttagcgtacaacctg
ggtggaacaaatacgtatcttgaaaatggcgcgcaaaacagaatgtactgttcaaaagct
gcaggccaaaagcttgctcatcaagatattgaaaatgtactggaggtgaaaaagcagcca
cttgtaaagcaatgtaaatctagcaaggattccaaatcttcttggcatcttgtctctggc
agagaagattgtccaatccagcagagctctctgagttttctaggagaacttggtgcgaca
ggatatagtggtccaaaatttcagtttgaggagatgttttggggtaaccagtcatccgtg
ctagcaatggattcatctccccatgattcaagtttcagcaaagcgttatctactccagat
agattctttaatttggactttccaataacaggagagtacacaagaaagaaaagtcccaat
gtgttatcatctaatcgaagagaatgcgtttcagcagcaggtttaaaatgcacccagtta
ccacaactgaaaaaaagacgtctaacctacgaaaaagaccctgggagaagcgatggtcaa
acacgtctcaaattcctttaa
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