Zootoca vivipara (common lizard): 118097857
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Entry
118097857 CDS
T07275
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118097857 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118097857 (HDAC6)
04131 Membrane trafficking [BR:
zvi04131
]
118097857 (HDAC6)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118097857 (HDAC6)
Enzymes [BR:
zvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118097857 (HDAC6)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118097857 (HDAC6)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118097857 (HDAC6)
Membrane trafficking [BR:
zvi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118097857 (HDAC6)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118097857 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118097857
NCBI-ProteinID:
XP_034997019
LinkDB
All DBs
Position
LG16:36138335..36172903
Genome browser
AA seq
1099 aa
AA seq
DB search
MASDVGDAQILEPSSVSPLETRAPTRKAKKKGGLPDAKRKGRAKRLNKDAEDLLSSMQRL
DLTTECATPVGTGLVWDERMTQFHCTWDESFPERPERLVAIRDKLLQCGLLERCIPVEAQ
EISEEEILLAHSPEYLALMKSTETMSEAELRSLSDTYDSVYLHPNSYHCACLAAGSVLQL
VEKVLAGKLRNGLALVRPPGHHAQHDKMDGYCMFNNVGIAAQYARQKLGVERVLIVDWDV
HHGQGTQYLFEDNPSILYFSIHRYEGGSFWPHLLDSDSHAVGRGRGEGYNINLPWNQIGM
RDADYLSAFLHILLPVALEFQPQLVLVAAGFDSVIGDPKGEMSATPACFAHLTHLLMPLS
GGKLVLSLEGGYNLQSLAEGTCAVLKALLGDPCPLLESPLTPCTSALCSISQTLAVHSKY
WKNLRRTSTDVPQENGGAAGIVLPPGHPLPATEILSKSAAELMLPRPPSCTGLVYDEKMT
EHYNMWDSQHPELPQRVSRIFQRHGELRLTERCCRLPARLASEEELRMCHSPAYVETVKS
TAAMKPRDLHRQGDQYNSIFICASSYECARLAAGSAFSAVEAVLSGQVQNAVAIVRPPGH
HAESDTACGFCFFNSVALAARYAQRLAGRPMRVMILDWDVHHGNGTQHIFEDDPSVLYVS
LHRYDNGTFFPTSEDADYDRVGLGPGAGFTLNVPWNCPRMGDPEYLAAFHQIVMPVSYEF
NPELVLVSAGFDAARGDPLGGCLVTPECYAHMTHLLLGLAGGKVAVVLEGGYNLESISES
MTMCTRSLLGDPLPPLGRLKAPHPSALQSLANAAAVHRKYWASLRLEVPAPLWEKPRTRA
GKGTPIPGEIPPEVPQELLQSPGAQPVNALNDAVLALSSLQLEDRLAEEAETASSSLSPD
SSPVGEEAGPKVGGTSPGEAEPVVDTQKESMSTGSSTGGAESPGKEAEVSPPAVRPMLAE
VILLDEAAGGCSSSCEPLEEDLAEAGLFYAVTPLPWCPHLDSVLPVPSLGLNVLEPCAEC
GSVAENWVCLICYKVCCGRYIKQHMVAHNSESGHPLVLSFADLSVWCYGCQAYVHHPVLF
EAKSQAHRLKFGVDMAIPS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatgttggagatgcccaaatattggaaccctcttctgtgtcgcctttggag
actcgcgcacccacgaggaaggctaagaagaagggagggttgccagacgccaaacggaaa
gggcgggccaagcggttgaacaaagatgcggaggatctgctctcaagcatgcagcgattg
gatctcaccacagaatgtgctacaccagtagggaccggcctggtttgggatgaacggatg
acacagtttcactgcacatgggatgaaagtttcccagagcgtccagagcggctggtggcc
atacgagacaaactgctgcaatgtggactgctggaacgttgcatcccagttgaggctcaa
gaaatttctgaggaggaaatcctcttggctcacagccccgagtacttggccctgatgaaa
tctactgaaaccatgagtgaggctgagctgagatctctgtcggacacatatgattctgtc
tatctgcacccaaattcctaccactgtgcctgccttgctgctggttctgtcctgcaactt
gtggagaaggtgctggctgggaagctgcgtaacggcctggctctggtcaggccacctgga
caccacgctcaacatgacaagatggatggctactgcatgttcaacaacgtaggcatcgca
gcccaatatgcgcggcaaaaattgggagtggagcgggtgcttattgttgactgggatgtg
catcatggacaaggcacccagtacctctttgaggacaatcccagcatcctctatttctcc
atccatcgctatgaagggggcagcttctggccccaccttttagactctgacagccatgct
gtgggcagaggtcggggagagggctacaacatcaacctgccctggaatcagataggaatg
cgggatgctgactacctctctgcctttttgcatatcctgctgcctgtggccttggagttt
cagccccagttggtcctggttgctgctggttttgactctgtaattggtgaccccaagggg
gagatgtcagccacgccagcatgttttgctcacctgacacatctgctgatgccgctgtct
ggaggcaagctggttctgtctctggagggtggctataacctccagtccctggcagaggga
acctgcgcagtcctcaaggctcttttaggagacccctgtcctctgctggagtctcctctt
accccatgtaccagtgccctctgctccatttcccagacccttgcagttcacagcaagtac
tggaagaacctccggagaaccagtactgatgtgcctcaggagaatggaggagcggctggc
atagttttgccaccaggccaccccttgccagcgaccgagatcctatccaagtcagcggca
gagctgatgctaccccggcccccatcctgcactgggctggtctatgatgagaagatgacg
gagcattacaacatgtgggacagccagcatccagagctgcctcagagagtctcccggatc
ttccagcgccacggggagctccgcctgacggaaaggtgctgccggctcccggcccggctt
gcctctgaagaggagttgcggatgtgccacagcccggcctatgtggagacggtgaagtcg
acggcggccatgaagccccgcgacctgcatcgccagggcgaccagtacaattccatcttc
atctgcgccagttcctatgagtgcgctcggctggcggctggttctgcgttcagtgcagta
gaggccgtgctctctgggcaggtccaaaatgctgtggccattgtccggccccctgggcac
catgctgaatcagacaccgcctgtggcttctgcttcttcaactctgtggccttggcagca
cgatacgcacagcgccttgctggacgacctatgagggtgatgatactagactgggatgtt
caccatggcaatgggacacagcacatatttgaagatgatcccagtgtcctgtatgtctcc
ctccatcgctatgacaatggaactttcttccccacctctgaggatgcagactatgatcgt
gtgggcctggggcctggggcgggcttcacccttaacgtgccttggaactgtccccgcatg
ggggaccctgagtacctggctgccttccatcagatagtcatgcctgtcagctatgagttc
aatccagagctggtcctggtttctgctggctttgacgctgcccgaggagacccgctgggc
ggatgcctcgtgactccagaatgctacgcacacatgacccatctgctcctgggtctggcc
ggaggcaaggtggcagttgtcttggagggcggctacaacctagaatcgatctcggaatcc
atgaccatgtgcacacgcagcctcctgggggatcctctgcccccgctgggacgcctcaag
gccccccaccccagtgccctgcagtctttggccaatgcagccgctgtgcaccgcaagtac
tgggcaagcctccgactggaagtgcctgctcctctgtgggagaagcccaggactcgagct
gggaaaggaactcccattccaggtgaaatcccaccggaggtcccccaggagctgcttcag
agccccggcgctcaacctgtgaatgccttgaatgatgccgttttggctctgagctccctc
cagctggaagaccgccttgcggaggaggcagagacagcttccagttccctctcacccgat
tccagtccggtgggtgaagaggctgggcccaaggttggggggacctcccctggagaagct
gagccagtggtggatacccagaaggaaagcatgtcgacggggagttccacgggtggagcg
gagtctcctggcaaagaggcagaggtaagcccaccggctgtacgcccaatgctagcggag
gttattctgcttgacgaagctgcaggtggctgctcttcctcctgtgagccgcttgaagaa
gacctggcagaggcagggctgttttatgctgtgactcccttgccatggtgcccccacctt
gactcagtgctccctgtgccttcccttggcttgaatgtgctggagccctgtgcagaatgt
ggcagcgtggcagagaattgggtctgtctgatttgctacaaggtttgctgcggccgctac
attaagcaacacatggtagctcacaactcagaatctgggcatccactggttcttagcttt
gcggacctctctgtctggtgctatggatgccaagcctatgtccaccacccggttctcttt
gaagccaagagccaggctcaccggctgaagtttggtgtggacatggcaataccgtcctaa
DBGET
integrated database retrieval system
