+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Paracidovorax avenae

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D Acav_4431 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E Acav_1210 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D Acav_2627 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Acav_1160 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D Acav_1696 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D Acav_2386 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Acav_1969 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D Acav_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Acav_0567 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D Acav_0844 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Acav_1468 Protein hfq K03666 hfq; host factor-I protein D Acav_0140 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Acav_0165 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Acav_1620 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Acav_2376 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_1934 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_4058 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_0862 transcriptional regulator, TrmB K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_2118 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_3388 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_4218 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_1169 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_2824 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_3945 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Acav_4582 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D Acav_2396 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Acav_3747 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D Acav_1457 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D Acav_0756 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Acav_1340 Septum formation initiator K05589 ftsB; cell division protein FtsB D Acav_0746 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Acav_3291 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Acav_0745 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Acav_0755 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Acav_0751 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Acav_0757 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Acav_1575 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Acav_1576 hypothetical protein K09892 zapB; cell division protein ZapB D Acav_3599 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Acav_2003 AFG1-family ATPase K06916 zapE; cell division protein ZapE D Acav_1324 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Acav_3039 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Acav_0460 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D Acav_0157 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Acav_0158 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Acav_0159 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Acav_4006 regulatory protein TetR K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D Acav_0354 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Acav_0355 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Acav_0356 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Acav_0778 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Acav_3809 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Acav_0064 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Acav_0350 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Acav_0067 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Acav_1359 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Acav_1357 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Acav_0061 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Acav_0062 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Acav_0732 integrase family protein K03733 xerC; integrase/recombinase XerC D Acav_1332 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Acav_3738 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Acav_4672 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Acav_0956 GTP-binding protein engB K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024