+D Transcription factors KO
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Transcription Factors - Amycolatopsis albispora
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Stork head/winged helix factors
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG TOX
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C NAC
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D A4R43_03180 hypothetical protein K07506 K07506; AraC family transcriptional regulator
D A4R43_37055 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D A4R43_23455 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D A4R43_00120 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D A4R43_00725 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D A4R43_21165 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D A4R43_36925 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D A4R43_12110 transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D A4R43_12045 transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D A4R43_21185 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
C DeoR family
D A4R43_09095 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D A4R43_09125 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D A4R43_19345 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D A4R43_02540 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_05535 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_06390 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_07020 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_14625 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_18995 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_20495 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_31480 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D A4R43_31485 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D A4R43_04615 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D A4R43_26205 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D A4R43_02165 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_02170 UbiC family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_03760 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_15870 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_29525 UbiC family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_29530 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_31520 transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D A4R43_03190 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D A4R43_16740 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D A4R43_19540 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D A4R43_20530 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D A4R43_23550 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D A4R43_39300 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D A4R43_01480 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D A4R43_00550 TetR family transcriptional regulator K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D A4R43_01350 TetR family transcriptional regulator K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D A4R43_13030 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D A4R43_11185 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D A4R43_16130 transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D A4R43_15985 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D A4R43_10475 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D A4R43_09560 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D A4R43_02410 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_02545 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_08770 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_10675 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_15445 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_20105 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_31335 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D A4R43_33000 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D A4R43_05655 hypothetical protein K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
C MarR family
D A4R43_19395 hypothetical protein K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D A4R43_20315 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D A4R43_06170 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D A4R43_10330 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D A4R43_07995 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D A4R43_17420 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D A4R43_23780 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D A4R43_03385 transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D A4R43_29390 transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D A4R43_31410 heat-shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D A4R43_10575 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D A4R43_10965 transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D A4R43_17430 twin-arginine translocation pathway signal protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D A4R43_34315 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D A4R43_39740 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D A4R43_00880 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D A4R43_19720 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D A4R43_27310 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D A4R43_10315 hypothetical protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D A4R43_18635 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D A4R43_19355 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D A4R43_10390 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D A4R43_27170 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D A4R43_28000 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D A4R43_28480 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
C ArsR family
D A4R43_02950 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D A4R43_17845 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D A4R43_11510 transcriptional regulator K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
D A4R43_01730 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D A4R43_39745 transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
D A4R43_20225 Cro/Cl family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D A4R43_41310 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
D A4R43_00585 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D A4R43_15145 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D A4R43_18735 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D A4R43_20865 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D A4R43_35595 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D A4R43_38740 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D A4R43_16685 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D A4R43_25380 transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D A4R43_41800 CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D A4R43_35215 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D A4R43_32915 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D A4R43_10195 XRE family transcriptional regulator K27097 espR; ESX-1-secreted protein regulator
D A4R43_37995 hypothetical protein K27097 espR; ESX-1-secreted protein regulator
D A4R43_25510 transcriptional regulator K07729 K07729; putative transcriptional regulator
D A4R43_41485 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D A4R43_05685 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_23125 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_23305 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_27245 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_34310 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_38190 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_22080 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D A4R43_02885 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D A4R43_19850 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D A4R43_21905 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D A4R43_01735 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D A4R43_39620 CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D A4R43_02480 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D A4R43_03705 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D A4R43_20860 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D A4R43_32255 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D A4R43_37020 SARP family transcriptional regulator K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D A4R43_37710 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D A4R43_30460 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D A4R43_26575 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D A4R43_14305 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D A4R43_39635 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D A4R43_28420 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D A4R43_06600 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D A4R43_37975 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D A4R43_04710 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D A4R43_30600 hypothetical protein K07735 algH; putative transcriptional regulator
D A4R43_16810 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D A4R43_41405 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: September 16, 2025
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Classification taken and modified from TRANSFAC 7.0