+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Aricia agestis (brown argus)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 121740064 mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 121725916 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E 121734129 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E 121729716 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] D Cap binding complex E 121734159 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 121729697 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 E 121737189 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 121736697 cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 121726296 cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 121725836 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 121726619 pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E 121727614 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 121725896 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 121736930 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 121729420 pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E 121735272 pre-mRNA 3' end processing protein WDR33 K15542 PFS2; polyadenylation factor subunit 2 E 121732994 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2 E 121734578 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 121727592 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 121728834 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 121725787 cleavage stimulation factor subunit 1 isoform X1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 121725658 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2 E 121727332 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3 E 121734696 symplekin isoform X1 K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 121740319 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 121727719 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 121739089 probable small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E 121738798 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E 121736503 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E 121729832 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E 121725896 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 121736930 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 121725658 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2 E 121734696 symplekin isoform X1 K06100 SYMPK; symplekin E 121733031 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E 121733012 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4 E 121725299 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 121729742 N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 121735266 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 121737089 N(6)-adenine-specific methyltransferase METTL4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E 121733447 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 121735414 pre-mRNA-splicing regulator female-lethal(2)D isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP E 121738432 protein virilizer K22910 VIRMA; protein virilizer E 121736992 RNA-binding protein spenito K13190 RBM15; RNA-binding protein 15 E 121726763 zinc finger CCCH domain-containing protein 13-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 121731394 E3 ubiquitin-protein ligase Hakai K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 121738117 poly(A) polymerase type 3 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 121734493 poly(A) RNA polymerase gld-2 homolog A-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] E 121734816 speckle targeted PIP5K1A-regulated poly(A) polymerase-like K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] D Negative regulators of mRNA 3' end processing E 121740354 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1 E 121726888 zinc finger protein swm isoform X1 K13192 RBM26; RNA-binding protein 26 E 121739180 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 E 121729665 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 E 121732014 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D 121725516 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17 D 121739240 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 121734777 zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D 121730423 serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 121740039 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A E 121729367 protein mago nashi homolog K12877 MAGOH; protein mago nashi E 121733456 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 121728188 ATP-dependent RNA helicase WM6 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 121726324 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 121735882 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174 E 121728438 protein CASC3-like isoform X1 K14323 CASC3; protein CASC3 E 121733590 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 121725815 pinin K13114 PNN; pinin E 121733178 RNA-binding protein with serine-rich domain 1-A-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 121731343 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 121739016 THO complex subunit 1 K12878 THOC1; THO complex subunit 1 E 121729116 THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2 E 121737838 THO complex subunit 3 K12880 THOC3; THO complex subunit 3 E 121733456 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 121733446 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5 E 121731642 THO complex subunit 6 K13175 THOC6; THO complex subunit 6 E 121733955 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7 D TREX-2 complex E 121726788 PCI domain-containing protein 2 homolog K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 121732035 enhancer of yellow 2 transcription factor-like K11368 ENY2; enhancer of yellow 2 transcription factor E 121725386 caltractin-like isoform X1 K10840 CETN2; centrin-2 D Nuclear pore complex E 121738298 nucleoprotein TPR isoform X1 K09291 TPR; nucleoprotein TPR E 121728726 protein Rae1 K14298 RAE1; mRNA export factor E 121725838 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E 121732620 nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E 121730161 nucleoporin Nup43 isoform X1 K14305 NUP43; nuclear pore complex protein Nup43 E 121728561 nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50 E 121729817 probable nucleoporin Nup54 K14308 NUP54; nuclear pore complex protein Nup54 E 121728010 nuclear pore glycoprotein p62 isoform X1 K14306 NUP62; nuclear pore complex protein Nup62 E 121727927 nucleoporin 88 K14318 NUP88; nuclear pore complex protein Nup88 E 121733920 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93 E 121736316 nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 121733555 nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107 E 121725915 nuclear pore complex protein Nup133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133 E 121730599 nucleoporin Nup188 K14311 NUP188; nuclear pore complex protein Nup188 E 121738714 nuclear pore complex protein Nup153 K14296 NUP153; nuclear pore complex protein Nup153 E 121731618 nuclear pore complex protein Nup154 K14312 NUP155; nuclear pore complex protein Nup155 E 121739412 nuclear pore complex protein Nup160 homolog K14303 NUP160; nuclear pore complex protein Nup160 E 121731115 nucleoporin Nup35 K14313 NUP35; nuclear pore complex protein Nup53 E 121729715 nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205 E 121735367 nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210 E 121732180 nuclear pore complex protein Nup214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214 E 121726366 nuclear pore complex protein Nup58-like K14307 NUPL1; nucleoporin p58/p45 E 121735206 zinc finger CCCH domain-containing protein 16-like K14321 NUPL2; nucleoporin-like protein 2 E 121725433 nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1 E 121737083 nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1 E 121729502 E3 SUMO-protein ligase RanBP2-like K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E 121735315 aladin-like K14320 AAAS; aladin E 121726706 nucleoporin Gle1 K18723 GLE1; nucleoporin GLE1 E 121734890 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E 121735075 nuclear RNA export factor 2-like isoform X1 K14284 NXF; nuclear RNA export factor E 121736111 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 121726663 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E 121731633 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran E 121727075 acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D E 121739786 ELAV-like protein 1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 121739806 ELAV-like protein 2 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 121734925 ELAV-like protein 1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 121727729 ELAV-like protein 4 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 121735599 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2 E 121737212 transitional endoplasmic reticulum ATPase TER94 isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase E 121725524 protein-lysine methyltransferase METTL21D-like K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E 121737762 exportin-1 K14290 XPO1; exportin-1 E 121740190 exportin-7 K18460 XPO7; exportin-7 E 121736650 ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 121730834 eukaryotic translation initiation factor 4E1-like K03259 EIF4E; translation initiation factor 4E E 121730836 eukaryotic translation initiation factor 4E1-like K03259 EIF4E; translation initiation factor 4E E 121725548 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 121727726 eukaryotic initiation factor 4A K03257 EIF4A; translation initiation factor 4A E 121739357 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 121729004 eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G E 121725409 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 121727742 eukaryotic translation initiation factor 4H-like isoform X1 K24086 EIF4H; translation initiation factor 4H E 121735411 eukaryotic translation initiation factor 4E-binding protein K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E 121727816 eukaryotic translation initiation factor 4E transporter-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 121738651 protein angel homolog 2-like isoform X1 K18729 ANGEL; protein angel E 121740441 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein E 121736455 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 121728564 gem-associated protein 5-like isoform X1 K13133 GEMIN5; gem associated protein 5 E 121736886 translational regulator orb2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 121725344 cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 121729305 ATP-dependent RNA helicase bel K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 121738417 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 121730751 polyadenylate-binding protein 1A K13126 PABPC; polyadenylate-binding protein E 121730896 polyadenylate-binding protein-interacting protein 1-like K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E 121726073 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 121739145 deformed epidermal autoregulatory factor 1 K23041 DEAF1; deformed epidermal autoregulatory factor 1 E 121726626 malignant T-cell-amplified sequence 1 homolog isoform X1 K07575 MCTS; malignant T-cell-amplified sequence E 121733458 density-regulated protein homolog K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 121733003 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E 121740485 heterogeneous nuclear ribonucleoprotein 87F-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 121740486 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 121725789 RNA-binding protein Musashi homolog Rbp6-like isoform X1 K14411 MSI; RNA-binding protein Musashi E 121734396 heterogeneous nuclear ribonucleoprotein 27C isoform X1 K14411 MSI; RNA-binding protein Musashi E 121731909 RNA-binding protein Musashi homolog Rbp6 isoform X1 K14411 MSI; RNA-binding protein Musashi E 121729572 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein E 121732117 protein pelota K06965 PELO; protein pelota E 121736923 polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2 E 121728708 DEAD-box helicase Dbp80 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 121727002 pre-mRNA-splicing factor syf1 homolog K12867 SYF1; pre-mRNA-splicing factor SYF1 E 121736060 SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein E 121737984 regulator of chromosome condensation-like isoform X1 K11493 RCC1; regulator of chromosome condensation E 121727571 la-related protein 6 K18733 LARP6; la-related protein 6 E 121736823 transcriptional activator protein Pur-alpha isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha E 121726022 zinc finger CCCH domain-containing protein 11B-like K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 E 121738608 leukocyte receptor cluster member 8 K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 121740381 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1 E 121732220 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3 E 121734122 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 121733900 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 121730047 regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 121735170 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 121737599 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 121737817 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 121727285 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 121729944 uncharacterized protein LOC121729944 isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 121726513 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 121726579 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 121739160 serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 121734498 protein SMG5 K11125 SMG5; protein SMG5 E 121732012 uncharacterized protein LOC121732012 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 121729616 protein SMG7-like K14409 SMG7; protein SMG7 E 121740618 protein SMG8 K18734 SMG8; protein SMG8 E 121734979 protein SMG9-like K18735 SMG9; protein SMG9 E 121738417 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 121734504 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E 121732102 GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E 121732345 protein penguin K14844 PUF6; pumilio homology domain family member 6 E 121737275 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 121737048 protein bicaudal D isoform X1 K18739 BICD; protein bicaudal D E 121727680 egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 E 121728907 piRNA biogenesis protein EXD1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E 121732823 actin-5C K05692 ACTB_G1; actin beta/gamma 1 E 121732832 actin, cytoplasmic A3a K05692 ACTB_G1; actin beta/gamma 1 E 121738693 myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein E 121731787 T-box transcription factor mls-1-like K10180 TBX6; T-box protein 6 E 121729385 uncharacterized protein LOC121729385 isoform X1 K18741 NANOS1; protein nanos 1 E 121738240 uncharacterized protein LOC121738240 K18741 NANOS1; protein nanos 1 E 121732919 uncharacterized protein LOC121732919 isoform X1 K18741 NANOS1; protein nanos 1 E 121732938 uncharacterized protein LOC121732938 isoform X1 K18741 NANOS1; protein nanos 1 E 121733288 protein hairy K09090 HESN; hairy and enhancer of split, invertebrate E 121733424 uncharacterized protein LOC121733424 K09090 HESN; hairy and enhancer of split, invertebrate E 121735449 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 121735496 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate D Trans-acting binding proteins E 121727289 far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein E 121729514 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha E 121730789 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 121734756 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E 121740406 HCLS1-associated protein X-1-like K16220 HAX1; HCLS1-associated protein X-1 E 121733978 arf-GAP domain and FG repeat-containing protein 1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E 121730663 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 121731317 polypyrimidine tract-binding protein 2 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1 E 121740281 RNA-binding protein squid isoform X1 K03102 SQD; squid E 121736886 translational regulator orb2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 121725344 cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E 121740441 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein E 121736455 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 121727346 poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 121728585 caprin homolog K18743 CAPRIN1; caprin-1 E 121740021 CUGBP Elav-like family member 1 isoform X1 K02177 BRU; bruno E 121727903 maternal protein exuperantia-1 K18745 EXU; maternal protein exuperantia E 121739369 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1 E 121727825 sex-lethal homolog isoform X1 K18747 SXL; protein sex-lethal C mRNA cycle factors D Common to processing body (P body) and stress granule E 121730917 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 121730126 protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C E 121738774 protein argonaute-2-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 121730834 eukaryotic translation initiation factor 4E1-like K03259 EIF4E; translation initiation factor 4E E 121730836 eukaryotic translation initiation factor 4E1-like K03259 EIF4E; translation initiation factor 4E E 121725548 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 121734122 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 121729305 ATP-dependent RNA helicase bel K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 121740055 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 121734261 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E 121738973 protein LSM14 homolog B-B-like isoform X1 K18749 LSM14; protein LSM14 E 121729150 protein LSM14 homolog B-A-like isoform X1 K18749 LSM14; protein LSM14 E 121739369 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1 E 121734537 LIM domain-containing protein jub K16682 AJUBA; LIM domain-containing protein E 121725970 probable RNA helicase SDE3 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 121730071 transportin-1 isoform X1 K18752 TNPO1; transportin-1 E 121739160 serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 121734498 protein SMG5 K11125 SMG5; protein SMG5 E 121732012 uncharacterized protein LOC121732012 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 121729616 protein SMG7-like K14409 SMG7; protein SMG7 E 121734685 protein TIS11 K15308 TTP; tristetraprolin E 121731293 protein lin-28 homolog K18754 LIN28; protein lin-28 E 121737580 huntingtin-like K04533 HD; huntingtin E 121735585 protein bicaudal C homolog 1-B isoform X1 K18756 BICC1; protein bicaudal C E 121740485 heterogeneous nuclear ribonucleoprotein 87F-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 121740486 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 121733523 cAMP-dependent protein kinase catalytic subunit 1 K04345 PKA; protein kinase A [EC:2.7.11.11] E 121736615 la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1 E 121728353 ataxin-2-like protein K23625 ATXN2_2L; ataxin 2/2L D P-body specific factors E 121734251 m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 121733365 mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 121734018 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 121727343 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 121735407 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 121736492 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 121732251 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 121727910 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 121735314 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 121725224 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 121734765 kinesin light chain isoform X1 K10407 KLC; kinesin light chain E 121737275 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 121727215 tubulin alpha-1A chain K07374 TUBA; tubulin alpha E 121730930 tubulin alpha chain-like K07374 TUBA; tubulin alpha E 121736425 tubulin alpha chain K07374 TUBA; tubulin alpha E 121738450 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 121736886 translational regulator orb2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 121725344 cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 121728564 gem-associated protein 5-like isoform X1 K13133 GEMIN5; gem associated protein 5 E 121732478 protein Gawky isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein E 121738843 CCR4-NOT transcription complex subunit 1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 121736168 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 121732877 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 121736319 uncharacterized protein LOC121736319 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 121725710 CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 121728747 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 121728748 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 121739055 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 121733015 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 121738735 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E 121731719 protein Tob1 K14443 TOB; protein Tob/BTG E 121727816 eukaryotic translation initiation factor 4E transporter-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 121727352 protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 121737038 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 121738665 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4 E 121733900 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 121730047 regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3 E 121737145 protein wech isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 121732849 RING finger protein nhl-1 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 121725937 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 121729856 YTH domain-containing family protein 3 isoform X1 K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 121725903 nucleolysin TIAR K13201 TIA1; nucleolysin TIA-1/TIAR E 121736504 nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 121730751 polyadenylate-binding protein 1A K13126 PABPC; polyadenylate-binding protein E 121730663 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 121740441 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein E 121725779 ras GTPase-activating protein-binding protein 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 121729710 eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A E 121732189 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 121727726 eukaryotic initiation factor 4A K03257 EIF4A; translation initiation factor 4A E 121726324 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 121725409 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 121739357 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 121729004 eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G E 121733635 ribosomal protein S6 kinase 2 beta isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E 121735373 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 121735419 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 121734890 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E 121735075 nuclear RNA export factor 2-like isoform X1 K14284 NXF; nuclear RNA export factor E 121736111 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 121730547 histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E 121728776 tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3 B mRNA degradation factors C 5'-3' decay D Decapping complex E 121733365 mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 121734251 m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 121740055 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 121737038 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 121738665 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4 E 121727352 protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E 121734018 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 121727343 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 121735407 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 121736492 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 121732251 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 121727910 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 121735314 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 121725224 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 121730917 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 121726230 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E 121737977 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E 121737619 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 E 121729333 exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4 E 121732892 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 E 121727730 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E 121726016 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46 E 121730269 exosome complex component MTR3-like isoform X1 K12587 MTR3; exosome complex component MTR3 E 121730198 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42 E 121728672 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 D Exosome cofactors E 121727465 exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E 121738539 exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 121725542 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 121728415 non-canonical poly(A) RNA polymerase protein Trf4-1-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 121730726 uncharacterized protein LOC121730726 K12597 AIR1_2; protein AIR1/2 E 121730479 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 121726073 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 121731666 tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3 E 121734144 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61 E 121734277 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 121725710 CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 121738843 CCR4-NOT transcription complex subunit 1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 121736168 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 121732877 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 121736319 uncharacterized protein LOC121736319 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 121728747 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 121728748 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 121735748 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 121728364 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E 121733015 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 121738735 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E 121731729 pre-piRNA 3'-exonuclease trimmer-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 121732216 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 121735294 ATP-dependent DNA/RNA helicase DHX36-like isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 121731719 protein Tob1 K14443 TOB; protein Tob/BTG E 121737977 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 121740519 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 121734698 protein Smaug isoform X1 K27396 SMG; protein Smaug C Other degradation factors D RNases E 121735303 probable ribonuclease ZC3H12B isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 121734933 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E 121733612 probable oligoribonuclease isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E 121733451 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 121725870 polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 121730458 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 121740189 heat shock 70 kDa protein cognate 5 K04043 dnaK; molecular chaperone DnaK E 121735327 heat shock protein 60A-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 121729333 exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4 E 121737619 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 D Cofactors E 121727730 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E 121730198 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024