+D GENES KO #

  KEGG Orthology (KO) - Alteromonas stellipolaris R10SW13

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:aaw00010] D AVL56_11975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AVL56_15510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_01130 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_06390 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AVL56_11925 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_11960 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_04040 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AVL56_01685 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AVL56_04555 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AVL56_12000 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AVL56_06770 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AVL56_15175 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AVL56_15170 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AVL56_07890 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AVL56_01185 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_11965 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D AVL56_19130 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AVL56_07710 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:aaw00020] D AVL56_10780 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AVL56_15725 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AVL56_01690 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03630 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03640 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_06580 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AVL56_04720 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D AVL56_10755 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AVL56_10750 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_10740 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AVL56_10745 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AVL56_10765 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AVL56_10760 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AVL56_10775 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AVL56_10770 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AVL56_05035 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AVL56_15925 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AVL56_19130 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AVL56_15175 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AVL56_15170 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:aaw00030] D AVL56_15510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AVL56_11990 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AVL56_11985 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D AVL56_11940 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AVL56_01970 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AVL56_04030 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AVL56_15505 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AVL56_15100 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AVL56_15080 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_07875 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AVL56_11980 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D AVL56_11970 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AVL56_16430 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AVL56_06155 hypothetical protein K00851 idnK; gluconokinase [EC:2.7.1.12] D AVL56_06720 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D AVL56_12135 carbohydrate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D AVL56_16435 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D AVL56_15750 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_01130 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:aaw00040] D AVL56_12160 hypothetical protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D AVL56_16345 cupin K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D AVL56_12095 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D AVL56_02965 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D AVL56_12090 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D AVL56_12125 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D AVL56_12120 altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D AVL56_12215 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D AVL56_12130 mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D AVL56_02970 Zn-dependent alcohol dehydrogenase K28749 E1.1.1.389; 2-dehydro-3-deoxy-L-galactonate 5-dehydrogenase [EC:1.1.1.389] D AVL56_17235 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AVL56_04710 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AVL56_01970 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AVL56_04155 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D AVL56_04160 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] C 00051 Fructose and mannose metabolism [PATH:aaw00051] D AVL56_15770 N-acylglucosamine 2-epimerase K29027 E5.3.1.7; mannose isomerase [EC:5.3.1.7] D AVL56_18140 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AVL56_10790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AVL56_17360 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AVL56_10230 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AVL56_05960 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_01130 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AVL56_04160 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D AVL56_11405 mannitol dehydrogenase K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D AVL56_06740 alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_06390 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AVL56_15015 levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] C 00052 Galactose metabolism [PATH:aaw00052] D AVL56_01185 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AVL56_01195 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D AVL56_01190 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D AVL56_04655 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AVL56_04710 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_11975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AVL56_01440 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D AVL56_01255 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_00580 isomerase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] C 00053 Ascorbate and aldarate metabolism [PATH:aaw00053] D AVL56_17235 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AVL56_13890 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:aaw00500] D AVL56_18065 amylosucrase K05341 ams; amylosucrase [EC:2.4.1.4] D AVL56_05970 alpha-amylase K00690 gtfA; sucrose phosphorylase [EC:2.4.1.7] D AVL56_14460 sucrose phosphorylase K00690 gtfA; sucrose phosphorylase [EC:2.4.1.7] D AVL56_04710 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AVL56_04185 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_08720 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18430 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18390 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_19740 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_16795 cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D AVL56_04165 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D AVL56_07210 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AVL56_14290 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AVL56_01455 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AVL56_11950 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AVL56_07755 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D AVL56_10720 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D AVL56_17100 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D AVL56_11955 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D AVL56_07710 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AVL56_11945 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_11975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AVL56_15510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AVL56_18140 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:aaw00620] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AVL56_15175 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AVL56_15170 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AVL56_07890 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D AVL56_07990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AVL56_07985 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AVL56_12000 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AVL56_04915 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AVL56_18990 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AVL56_18995 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AVL56_12570 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_10620 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D AVL56_02430 hypothetical protein K18930 dld; D-lactate dehydrogenase D AVL56_00575 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AVL56_02960 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AVL56_09445 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AVL56_14395 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AVL56_12440 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AVL56_16845 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AVL56_02040 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D AVL56_17675 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AVL56_09885 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D AVL56_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D AVL56_09890 oxaloacetate decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D AVL56_12785 isomerase/hydrolase K29029 FAHD2; oxaloacetate tautomerase [EC:5.3.2.2] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AVL56_05035 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AVL56_15925 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AVL56_16955 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AVL56_19130 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AVL56_06770 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AVL56_13880 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_04535 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aaw00630] D AVL56_13870 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D AVL56_13880 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AVL56_10780 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AVL56_15725 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AVL56_01690 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03630 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03640 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_14675 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AVL56_12365 catalase K03781 katE; catalase [EC:1.11.1.6] D AVL56_17125 catalase K03781 katE; catalase [EC:1.11.1.6] D AVL56_19615 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AVL56_06915 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AVL56_05085 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D AVL56_15985 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AVL56_00515 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_13265 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_14985 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AVL56_14995 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_14990 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AVL56_01630 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D AVL56_15750 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AVL56_05955 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D AVL56_00575 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AVL56_02960 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D AVL56_11970 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AVL56_16430 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AVL56_00540 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AVL56_01805 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:aaw00640] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AVL56_08045 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D AVL56_07990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AVL56_07985 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AVL56_05050 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AVL56_05055 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D AVL56_05060 dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_04915 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AVL56_18990 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AVL56_18995 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AVL56_12570 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AVL56_00770 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AVL56_14675 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AVL56_10745 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AVL56_10740 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AVL56_00620 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_00775 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_15725 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AVL56_15730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D AVL56_15735 3-methylitaconate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D AVL56_01690 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03630 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03640 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_15720 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D AVL56_13870 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D AVL56_02115 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D AVL56_04005 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:aaw00650] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_11445 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_16945 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D AVL56_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D AVL56_10765 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AVL56_10760 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AVL56_10775 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AVL56_10770 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AVL56_17810 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D AVL56_19210 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AVL56_07180 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_14655 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_04995 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D AVL56_04990 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D AVL56_08105 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D AVL56_02255 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_18190 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_02260 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AVL56_02970 Zn-dependent alcohol dehydrogenase K28749 E1.1.1.389; 2-dehydro-3-deoxy-L-galactonate 5-dehydrogenase [EC:1.1.1.389] C 00660 C5-Branched dibasic acid metabolism [PATH:aaw00660] D AVL56_02255 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_18190 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_02260 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AVL56_10745 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AVL56_10740 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AVL56_08885 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AVL56_18020 diguanylate cyclase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AVL56_04525 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AVL56_14635 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AVL56_04520 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AVL56_14630 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AVL56_04530 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:aaw00562] D AVL56_13750 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AVL56_07120 hypothetical protein K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D AVL56_00620 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_00775 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_06390 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00566 Sulfoquinovose metabolism D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:aaw00190] D AVL56_18735 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AVL56_10765 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AVL56_10760 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AVL56_10775 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AVL56_10770 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AVL56_03790 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AVL56_03795 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AVL56_03800 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AVL56_14570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_19390 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_14565 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D AVL56_19415 MFS transporter K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D AVL56_19425 cytochrome oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D AVL56_19430 cytochrome B559 subunit alpha K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D AVL56_19420 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AVL56_19395 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AVL56_05275 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AVL56_05280 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AVL56_05285 cytochrome-c oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AVL56_05290 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AVL56_14560 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D AVL56_14555 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D AVL56_14550 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D AVL56_17520 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AVL56_18540 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AVL56_17525 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AVL56_18535 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AVL56_18530 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D AVL56_19810 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AVL56_19800 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AVL56_19805 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AVL56_19815 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AVL56_19795 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AVL56_19830 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AVL56_19820 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AVL56_19825 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AVL56_01135 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AVL56_04060 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:aaw00710] D AVL56_04040 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AVL56_11925 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_11960 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_01130 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AVL56_04030 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AVL56_15100 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AVL56_19090 phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19] D AVL56_06390 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AVL56_01970 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AVL56_15505 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AVL56_16955 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AVL56_19130 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D AVL56_17675 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:aaw00720] D AVL56_06770 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AVL56_16955 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AVL56_05035 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AVL56_15925 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AVL56_10765 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AVL56_10760 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AVL56_10775 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AVL56_10770 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AVL56_10740 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AVL56_10745 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_06580 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AVL56_01690 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03630 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_03640 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AVL56_04915 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AVL56_18990 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AVL56_18995 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AVL56_12570 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AVL56_14675 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AVL56_13585 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AVL56_17685 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AVL56_07985 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AVL56_07990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:aaw00680] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AVL56_16695 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D AVL56_00515 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_13265 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_05085 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D AVL56_19615 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AVL56_15750 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AVL56_04555 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AVL56_16955 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_01130 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_07990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AVL56_07985 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AVL56_06770 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AVL56_01685 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AVL56_15105 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AVL56_05645 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AVL56_13295 SerB protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AVL56_00750 radical SAM protein K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32] D AVL56_00755 FO synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32] D AVL56_00745 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D AVL56_00735 coenzyme F420:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:aaw00910] D AVL56_03335 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AVL56_03340 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AVL56_03345 bacitracin ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AVL56_03315 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D AVL56_03305 nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D AVL56_03310 nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D AVL56_05155 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AVL56_15985 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AVL56_15790 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AVL56_15795 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AVL56_07795 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D AVL56_09955 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:aaw00920] D AVL56_09275 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AVL56_09260 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AVL56_09265 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AVL56_09270 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AVL56_19230 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AVL56_16620 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D AVL56_16630 sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AVL56_17930 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AVL56_16625 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D AVL56_05405 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AVL56_00335 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D AVL56_01065 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_13740 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_13920 acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_06000 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AVL56_17540 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AVL56_09985 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D AVL56_08095 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AVL56_03390 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D AVL56_11435 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:aaw00061] D AVL56_04915 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AVL56_18990 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AVL56_18995 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AVL56_12570 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AVL56_02635 hypothetical protein K02078 acpP; acyl carrier protein D AVL56_06875 acyl carrier protein K02078 acpP; acyl carrier protein D AVL56_06885 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AVL56_06890 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AVL56_12605 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AVL56_06870 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AVL56_06730 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_06880 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_10185 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_14250 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_16335 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_05190 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AVL56_04890 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AVL56_16945 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D AVL56_03615 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_11765 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12805 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:aaw00071] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_11445 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D AVL56_00650 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AVL56_11480 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AVL56_05930 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D AVL56_14095 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D AVL56_03615 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_11765 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12805 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_03010 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis [PATH:aaw00073] D AVL56_17615 hydroxymethylglutaryl-CoA reductase K28139 fcrA; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D AVL56_17925 hydroxymethylglutaryl-CoA reductase K28139 fcrA; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D AVL56_12715 hypothetical protein K00635 tgs; wax synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] C 00074 Mycolic acid biosynthesis [PATH:aaw00074] D AVL56_03725 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AVL56_05365 hypothetical protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D AVL56_02635 hypothetical protein K02078 acpP; acyl carrier protein D AVL56_06875 acyl carrier protein K02078 acpP; acyl carrier protein D AVL56_06885 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:aaw00561] D AVL56_15750 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AVL56_05955 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_01280 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AVL56_19535 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AVL56_06895 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AVL56_03485 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AVL56_16010 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AVL56_05235 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AVL56_12715 hypothetical protein K00635 tgs; wax synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] D AVL56_18170 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D AVL56_01255 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:aaw00564] D AVL56_02160 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AVL56_01290 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D AVL56_19535 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AVL56_03485 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AVL56_16010 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D AVL56_00265 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D AVL56_05235 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AVL56_16480 phospholipase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D AVL56_13610 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AVL56_02150 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D AVL56_02200 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AVL56_09450 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AVL56_04865 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AVL56_13120 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AVL56_02210 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D AVL56_05455 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D AVL56_13225 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism [PATH:aaw00565] D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D AVL56_13610 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AVL56_16480 phospholipase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism [PATH:aaw00600] D AVL56_01440 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D AVL56_01255 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism [PATH:aaw00590] D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D AVL56_13610 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AVL56_04200 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D AVL56_13610 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:aaw00592] D AVL56_12730 esterase K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D AVL56_13610 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:aaw01040] D AVL56_16590 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D AVL56_12670 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D AVL56_12665 oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D AVL56_08265 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AVL56_05075 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:aaw00230] D AVL56_03175 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AVL56_19225 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_07875 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AVL56_12550 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AVL56_19070 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AVL56_05920 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AVL56_04950 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D AVL56_05915 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AVL56_02345 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AVL56_02340 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AVL56_05845 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D AVL56_06600 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AVL56_19060 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AVL56_13055 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AVL56_02785 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AVL56_19220 HAD family hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D AVL56_06630 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AVL56_13145 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AVL56_13635 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AVL56_13690 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AVL56_19215 xanthosine triphosphate pyrophosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D AVL56_04490 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AVL56_07620 xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D AVL56_07625 aldehyde oxidase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D AVL56_12505 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D AVL56_12510 molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D AVL56_12515 oxidoreductase K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D AVL56_13630 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AVL56_07645 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D AVL56_00825 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AVL56_05660 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AVL56_05665 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AVL56_06230 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AVL56_06225 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D AVL56_11880 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D AVL56_00835 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AVL56_02305 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AVL56_04055 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AVL56_03735 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D AVL56_06605 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D AVL56_14410 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D AVL56_12335 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17] D AVL56_02390 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AVL56_07555 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D AVL56_04735 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AVL56_06980 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D AVL56_07595 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D AVL56_13015 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AVL56_03740 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AVL56_03185 hypothetical protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D AVL56_03660 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D AVL56_09265 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D AVL56_09275 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AVL56_09260 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AVL56_07640 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D AVL56_07635 OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D AVL56_07610 allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5] D AVL56_07545 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D AVL56_07540 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D AVL56_07530 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:aaw00240] D AVL56_08025 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AVL56_08030 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AVL56_01890 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AVL56_18040 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AVL56_05160 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D AVL56_19700 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AVL56_05605 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AVL56_04850 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AVL56_13690 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AVL56_03740 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AVL56_01395 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AVL56_14815 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D AVL56_04560 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AVL56_05635 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AVL56_17000 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D AVL56_02785 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AVL56_06630 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AVL56_14125 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D AVL56_04735 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AVL56_10900 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D AVL56_12420 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AVL56_05660 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AVL56_05665 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AVL56_06225 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D AVL56_11880 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D AVL56_06855 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AVL56_14110 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D AVL56_02890 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AVL56_00790 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AVL56_00780 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AVL56_08750 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:aaw00250] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_13355 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AVL56_06500 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AVL56_09305 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AVL56_06220 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AVL56_05085 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D AVL56_05600 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D AVL56_02095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AVL56_02390 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AVL56_06600 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AVL56_15235 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15] D AVL56_01890 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AVL56_17810 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D AVL56_19210 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AVL56_15790 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AVL56_15795 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AVL56_05155 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AVL56_02820 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AVL56_15985 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AVL56_08025 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AVL56_08030 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AVL56_13855 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AVL56_18865 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AVL56_12550 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:aaw00260] D AVL56_03650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D AVL56_15530 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AVL56_08535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_12585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_15525 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D AVL56_15520 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AVL56_00515 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_13265 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_05085 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D AVL56_19615 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D AVL56_15750 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AVL56_01685 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AVL56_05955 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D AVL56_15105 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AVL56_05645 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AVL56_13295 SerB protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AVL56_00325 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D AVL56_00330 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D AVL56_14985 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AVL56_14995 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_14990 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AVL56_12340 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D AVL56_13120 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AVL56_11065 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D AVL56_11070 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AVL56_00500 Rieske (2Fe-2S) protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D AVL56_00510 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D AVL56_00480 N-methylproline demethylase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D AVL56_00465 hypothetical protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D AVL56_00530 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D AVL56_00520 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D AVL56_00535 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D AVL56_00525 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D AVL56_00555 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AVL56_05020 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AVL56_16835 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AVL56_19540 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AVL56_19350 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AVL56_08210 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AVL56_08205 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:aaw00270] D AVL56_01065 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_13740 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_13920 acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_06000 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AVL56_17540 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AVL56_05475 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AVL56_15965 aminotransferase class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AVL56_09975 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AVL56_06270 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AVL56_04025 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AVL56_12005 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D AVL56_15820 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D AVL56_13145 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AVL56_05095 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D AVL56_04345 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AVL56_16165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AVL56_03650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D AVL56_15530 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AVL56_08535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_12585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_15525 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D AVL56_09985 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D AVL56_08095 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AVL56_06035 hypothetical protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D AVL56_09105 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D AVL56_19550 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AVL56_09585 glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_05405 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AVL56_19350 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AVL56_16965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AVL56_00555 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AVL56_05020 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AVL56_15105 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AVL56_05645 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:aaw00280] D AVL56_19550 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AVL56_09805 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AVL56_05050 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AVL56_05055 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D AVL56_05060 dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_00650 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AVL56_11480 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AVL56_07160 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_14675 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AVL56_00625 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D AVL56_00620 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_00775 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_00770 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AVL56_07175 3-methylcrotonyl-CoA carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D AVL56_07165 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D AVL56_07170 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D AVL56_07180 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_14655 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_04995 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D AVL56_04990 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aaw00290] D AVL56_16835 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AVL56_19540 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AVL56_04525 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AVL56_14635 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AVL56_04520 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AVL56_14630 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AVL56_04530 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D AVL56_02255 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_18190 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_02260 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AVL56_19570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AVL56_19545 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AVL56_19550 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AVL56_09805 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AVL56_06220 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AVL56_04535 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:aaw00300] D AVL56_03650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D AVL56_15530 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AVL56_08535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_12585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_01235 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AVL56_05855 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AVL56_08035 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D AVL56_04825 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AVL56_01950 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AVL56_07720 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AVL56_13525 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AVL56_01085 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AVL56_01090 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AVL56_15310 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AVL56_15305 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:aaw00310] D AVL56_10750 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_19350 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AVL56_19210 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AVL56_06625 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D AVL56_06165 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_09635 gamma-butyrobetaine hydroxylase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] C 00220 Arginine biosynthesis [PATH:aaw00220] D AVL56_02100 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AVL56_02095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AVL56_13855 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AVL56_15985 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AVL56_08025 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AVL56_08030 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AVL56_05155 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_06220 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AVL56_02085 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D AVL56_02105 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AVL56_02110 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D AVL56_01950 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:aaw00330] D AVL56_14650 5-oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D AVL56_14645 5-oxoprolinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D AVL56_18100 acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D AVL56_15630 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D AVL56_15635 carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_00590 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D AVL56_07525 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_19035 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_01945 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D AVL56_07005 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D AVL56_01940 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D AVL56_07745 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D AVL56_15455 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AVL56_02820 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AVL56_06340 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AVL56_19625 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AVL56_06335 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AVL56_17705 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AVL56_03555 hypothetical protein K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D AVL56_09775 hypothetical protein K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_06165 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AVL56_12340 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00340 Histidine metabolism [PATH:aaw00340] D AVL56_12890 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D AVL56_12925 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D AVL56_12915 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D AVL56_12910 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AVL56_12920 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AVL56_12905 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D AVL56_11730 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12900 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_16505 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12895 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_15235 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15] D AVL56_09585 glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] C 00350 Tyrosine metabolism [PATH:aaw00350] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_11730 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12900 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_16505 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_07695 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AVL56_07690 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D AVL56_09815 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D AVL56_08820 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D AVL56_09820 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AVL56_08855 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D AVL56_19210 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:aaw00360] D AVL56_09830 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_11730 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12900 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_16505 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_11620 acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D AVL56_07695 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AVL56_06165 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AVL56_16460 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D AVL56_16960 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D AVL56_07525 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_19035 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_03010 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AVL56_17320 aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism [PATH:aaw00380] D AVL56_09790 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D AVL56_10750 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_07525 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_19035 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_12365 catalase K03781 katE; catalase [EC:1.11.1.6] D AVL56_17125 catalase K03781 katE; catalase [EC:1.11.1.6] D AVL56_16460 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D AVL56_16960 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aaw00400] D AVL56_08355 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AVL56_09055 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AVL56_02000 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D AVL56_18985 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AVL56_00145 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AVL56_02005 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AVL56_05640 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AVL56_09530 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AVL56_08185 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AVL56_08190 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AVL56_08195 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D AVL56_08200 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D AVL56_08210 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AVL56_08205 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AVL56_09050 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D AVL56_09040 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_11730 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12900 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_16505 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_09830 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:aaw00410] D AVL56_17810 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_17805 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AVL56_00790 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AVL56_00780 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AVL56_00770 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_00620 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AVL56_00775 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:aaw00430] D AVL56_17810 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D AVL56_01870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_02405 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_06010 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_05600 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D AVL56_05155 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AVL56_07985 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AVL56_07990 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:aaw00450] D AVL56_05475 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AVL56_15965 aminotransferase class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AVL56_09975 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AVL56_06270 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AVL56_13710 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D AVL56_06545 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AVL56_09275 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AVL56_09260 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AVL56_12430 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:aaw00460] D AVL56_04185 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_08720 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18430 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18390 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_19740 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_01870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_02405 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_06010 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_06500 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AVL56_00515 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_13265 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:aaw00470] D AVL56_02445 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AVL56_06165 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AVL56_15275 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AVL56_19350 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D AVL56_13855 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AVL56_15295 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AVL56_01085 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AVL56_01090 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AVL56_12340 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00480 Glutathione metabolism [PATH:aaw00480] D AVL56_01870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_02405 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_06010 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_06180 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D AVL56_09585 glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D AVL56_15420 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AVL56_16050 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AVL56_17770 aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D AVL56_05125 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AVL56_01030 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_06965 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_12680 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_14430 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_15495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_18160 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_19780 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_17600 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D AVL56_06580 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AVL56_11940 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AVL56_11990 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AVL56_10615 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AVL56_15370 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D AVL56_00860 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aaw00520] D AVL56_15860 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D AVL56_07710 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AVL56_02440 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D AVL56_18875 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AVL56_03920 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AVL56_17170 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AVL56_02415 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AVL56_07305 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AVL56_04245 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D AVL56_04240 hypothetical protein K18676 gspK; glucosamine kinase [EC:2.7.1.8] D AVL56_06395 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AVL56_18865 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AVL56_18140 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AVL56_15510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AVL56_13890 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AVL56_11975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_04710 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AVL56_17235 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AVL56_01195 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D AVL56_01190 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D AVL56_04655 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AVL56_10790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AVL56_17360 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AVL56_07210 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AVL56_14290 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AVL56_17255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:aaw00541] D AVL56_18875 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AVL56_14960 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D AVL56_10145 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115] D AVL56_10155 CMP-N-acetylneuraminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D AVL56_03880 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AVL56_07830 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AVL56_03875 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AVL56_10840 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AVL56_17325 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AVL56_15660 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AVL56_10585 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AVL56_14040 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AVL56_04710 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AVL56_17235 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AVL56_17255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AVL56_17240 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AVL56_17250 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AVL56_17245 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AVL56_17360 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AVL56_10230 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AVL56_10225 hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:aaw00511] D AVL56_01440 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis [PATH:aaw00540] D AVL56_04895 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AVL56_15255 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AVL56_13270 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AVL56_12470 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AVL56_04900 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AVL56_10850 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AVL56_01770 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AVL56_14065 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AVL56_03600 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AVL56_00300 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D AVL56_01765 lipopolysaccharide heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] C 00542 O-Antigen repeat unit biosynthesis [PATH:aaw00542] D AVL56_04695 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:aaw00550] D AVL56_03920 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AVL56_17170 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AVL56_15280 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AVL56_15295 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AVL56_15310 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AVL56_15275 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AVL56_15305 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AVL56_04860 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AVL56_03500 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AVL56_01105 Type II phosphatidic acid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D AVL56_15300 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AVL56_15285 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AVL56_02035 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AVL56_01830 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AVL56_15290 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_06465 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_06460 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AVL56_15315 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AVL56_06475 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:aaw00552] D AVL56_03500 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AVL56_01105 Type II phosphatidic acid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D AVL56_04695 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D AVL56_04695 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:aaw00543] D AVL56_07385 hypothetical protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D AVL56_04695 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AVL56_01065 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_13740 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AVL56_13920 acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:aaw00730] D AVL56_00715 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D AVL56_00710 thiamine monophosphate synthase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D AVL56_00705 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D AVL56_13730 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AVL56_00690 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D AVL56_13220 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AVL56_00695 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D AVL56_13230 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AVL56_02215 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AVL56_13860 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1] D AVL56_13015 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:aaw00740] D AVL56_01010 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AVL56_13245 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AVL56_13255 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AVL56_01070 haloacid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D AVL56_13240 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AVL56_13250 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AVL56_13470 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D AVL56_07115 acid phosphatase K14379 ACP5; tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2] D AVL56_17495 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D AVL56_03175 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AVL56_01120 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:aaw00750] D AVL56_06840 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AVL56_13310 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AVL56_04035 gapA; glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D AVL56_12590 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D AVL56_05645 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AVL56_03675 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D AVL56_03720 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D AVL56_15520 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:aaw00760] D AVL56_13355 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AVL56_08900 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AVL56_15200 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D AVL56_02785 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AVL56_06445 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AVL56_03740 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AVL56_18270 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D AVL56_13390 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D AVL56_04570 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AVL56_05400 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D AVL56_08110 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AVL56_16595 pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D AVL56_18920 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AVL56_18925 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AVL56_18915 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D AVL56_14640 isochorismatase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D AVL56_19210 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:aaw00770] D AVL56_02255 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_18190 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AVL56_02260 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AVL56_19570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AVL56_19545 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AVL56_17800 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AVL56_08555 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D AVL56_09605 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D AVL56_17805 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AVL56_17160 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D AVL56_00235 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AVL56_03740 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AVL56_00295 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AVL56_15220 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AVL56_03725 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AVL56_05365 hypothetical protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D AVL56_12535 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D AVL56_19550 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AVL56_00790 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AVL56_00780 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:aaw00780] D AVL56_08385 methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D AVL56_12605 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AVL56_06870 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AVL56_06730 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_06880 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_10185 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_14250 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_16335 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_04890 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AVL56_19325 pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D AVL56_08390 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AVL56_08400 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AVL56_08380 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D AVL56_08395 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D AVL56_17165 BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:aaw00785] D AVL56_06485 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AVL56_06490 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_15175 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AVL56_15170 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AVL56_10755 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AVL56_10750 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AVL56_05050 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AVL56_05055 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D AVL56_05060 dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AVL56_14985 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AVL56_14995 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AVL56_14990 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:aaw00790] D AVL56_18075 folE; type I GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AVL56_13860 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1] D AVL56_17470 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AVL56_08970 dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D AVL56_03490 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AVL56_03495 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AVL56_17795 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AVL56_06400 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AVL56_02760 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AVL56_12565 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AVL56_01010 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AVL56_13245 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AVL56_01960 anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D AVL56_05030 aminobenzoate synthetase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D AVL56_06865 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D AVL56_08245 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D AVL56_11355 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AVL56_09830 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D AVL56_07495 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D AVL56_09315 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AVL56_09320 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AVL56_04745 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AVL56_08335 moaA; cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AVL56_11540 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AVL56_11530 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AVL56_11545 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D AVL56_05975 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D AVL56_05985 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D AVL56_12250 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:aaw00670] D AVL56_02760 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AVL56_13585 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AVL56_00515 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_13265 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_05920 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AVL56_19060 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AVL56_14995 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AVL56_09975 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AVL56_02890 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AVL56_00540 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AVL56_01805 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AVL56_17685 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AVL56_15095 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D AVL56_04025 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AVL56_16165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AVL56_14985 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_14990 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AVL56_11065 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D AVL56_11070 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:aaw00860] D AVL56_08305 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AVL56_07855 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D AVL56_01885 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AVL56_02300 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AVL56_00810 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AVL56_00805 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D AVL56_18265 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AVL56_00130 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D AVL56_11510 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D AVL56_15945 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D AVL56_18200 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AVL56_00800 heme biosynthesis operon protein HemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D AVL56_03150 sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D AVL56_03320 multifunctional protein K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D AVL56_11690 methylase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D AVL56_14570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_19390 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_19395 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AVL56_07295 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AVL56_15825 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D AVL56_18395 pyridoxamine 5'-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D AVL56_05260 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D AVL56_05265 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:aaw00130] D AVL56_00350 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D AVL56_00355 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AVL56_17490 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D AVL56_01120 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AVL56_15055 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D AVL56_05655 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AVL56_18175 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AVL56_15060 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D AVL56_17565 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AVL56_07955 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D AVL56_05890 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AVL56_07695 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:aaw00900] D AVL56_13220 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AVL56_04870 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D AVL56_02800 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D AVL56_07865 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D AVL56_02795 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D AVL56_13670 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D AVL56_13450 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_01120 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AVL56_13215 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AVL56_02715 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AVL56_04860 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_17615 hydroxymethylglutaryl-CoA reductase K28139 fcrA; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D AVL56_17925 hydroxymethylglutaryl-CoA reductase K28139 fcrA; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:aaw00907] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_07890 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D AVL56_07180 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_14655 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AVL56_04030 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics D AVL56_15035 hypothetical protein K21162 sgcE4; enediyne biosynthesis protein E4 C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:aaw00523] D AVL56_17255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AVL56_17240 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AVL56_17250 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AVL56_17245 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D AVL56_05365 hypothetical protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] C 01055 Biosynthesis of vancomycin group antibiotics D AVL56_17240 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:aaw00946] D AVL56_04185 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_08720 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18430 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18390 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_19740 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_08800 (2Fe-2S)-binding protein K26179 fdeD; naringenin degradation protein FdeD D AVL56_08795 hypothetical protein K26180 fdeE; naringenin degradation protein FdeE D AVL56_08805 glyoxalase K26181 fdeC; naringenin degradation protein FdeC D AVL56_08810 hydrolase K26184 fdeB; naringenin degradation protein FdeB C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:aaw00311] D AVL56_12340 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D AVL56_07310 hydrolase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:aaw00332] D AVL56_06340 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AVL56_19625 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AVL56_06335 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:aaw00261] D AVL56_09275 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AVL56_09260 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AVL56_03650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D AVL56_15530 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D AVL56_08535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_12585 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AVL56_01235 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AVL56_05855 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AVL56_08035 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:aaw00521] D AVL56_11975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AVL56_07760 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AVL56_13750 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AVL56_17255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AVL56_17240 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AVL56_17250 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AVL56_17245 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D AVL56_11975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:aaw00525] D AVL56_17255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AVL56_17240 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:aaw00401] D AVL56_09050 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_11730 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12900 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_16505 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis D AVL56_01270 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D AVL56_04175 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D AVL56_10730 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D AVL56_19725 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D AVL56_19730 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D AVL56_08185 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AVL56_08190 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AVL56_06885 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AVL56_06730 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_06880 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_10185 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_14250 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_16335 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00975 Biosynthesis of various siderophores [PATH:aaw00975] D AVL56_16105 short-chain oxidoreductase K24108 asbA; spermidine-citrate ligase [EC:6.3.2.-] D AVL56_16110 hypothetical protein K24109 asbB; 3,4-dihydroxybenzoyl-citryl-spermidine/N-citryl-spermidine--spermidine ligase [EC:6.3.2.-] D AVL56_16120 phosphopantetheine-binding protein K24112 asbE; petrobactin synthase [EC:2.-.-.-] D AVL56_16125 3-dehydroshikimate dehydratase K15652 asbF; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D AVL56_16115 hypothetical protein K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62] C 00998 Biosynthesis of various antibiotics D AVL56_02635 hypothetical protein K02078 acpP; acyl carrier protein D AVL56_06875 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:aaw00999] D AVL56_04025 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AVL56_00145 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AVL56_04185 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_08720 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18430 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AVL56_18390 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AVL56_19740 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:aaw00362] D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_17320 aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D AVL56_08865 protocatechuate 3,4-dioxygenase K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D AVL56_08860 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D AVL56_08855 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D AVL56_08870 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D AVL56_08880 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D AVL56_08875 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D AVL56_08885 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AVL56_18020 diguanylate cyclase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AVL56_03010 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AVL56_03005 hypothetical protein K04755 fdx; ferredoxin, 2Fe-2S D AVL56_08675 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_11445 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D AVL56_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:aaw00627] D AVL56_14615 FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-] D AVL56_07525 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_19035 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_01120 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AVL56_08685 Rieske (2Fe-2S) protein K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D AVL56_08690 hypothetical protein K03863 vanB; vanillate monooxygenase ferredoxin subunit D AVL56_08785 hypothetical protein K03863 vanB; vanillate monooxygenase ferredoxin subunit D AVL56_08865 protocatechuate 3,4-dioxygenase K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D AVL56_08860 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D AVL56_08855 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D AVL56_08870 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:aaw00625] D AVL56_11450 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AVL56_02395 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AVL56_01570 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D AVL56_06940 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:aaw00361] D AVL56_11450 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D AVL56_01570 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D AVL56_06940 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation D AVL56_17320 aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation [PATH:aaw00633] D AVL56_15880 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:aaw00643] D AVL56_07690 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D AVL56_09815 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D AVL56_08820 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D AVL56_09820 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D AVL56_07525 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AVL56_19035 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:aaw00930] D AVL56_02695 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D AVL56_09195 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D AVL56_17320 aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation [PATH:aaw00626] D AVL56_15540 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D AVL56_08865 protocatechuate 3,4-dioxygenase K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D AVL56_08860 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation [PATH:aaw00984] D AVL56_02690 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_09200 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AVL56_11440 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:aaw03020] D AVL56_17975 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AVL56_17970 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AVL56_17370 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AVL56_00830 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:aaw03010] D AVL56_00155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_01660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_13115 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_16560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_17195 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_00165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_01670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_13100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_16545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_17185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_00170 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_01675 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_13095 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_16540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_17180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_05630 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AVL56_04840 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AVL56_01740 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AVL56_17375 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AVL56_17405 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AVL56_18350 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AVL56_17960 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AVL56_17420 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AVL56_03760 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AVL56_01705 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AVL56_17380 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AVL56_17965 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AVL56_17385 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AVL56_17425 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AVL56_11305 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AVL56_09090 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AVL56_01755 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AVL56_18345 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AVL56_01730 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AVL56_13480 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AVL56_03470 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AVL56_17990 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AVL56_01725 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AVL56_01710 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AVL56_01715 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AVL56_17430 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AVL56_17415 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AVL56_18340 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AVL56_17985 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AVL56_17995 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AVL56_17980 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AVL56_03755 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AVL56_17440 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AVL56_17395 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AVL56_01745 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AVL56_17365 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AVL56_17410 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AVL56_09075 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AVL56_07475 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AVL56_02720 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AVL56_01735 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AVL56_01720 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AVL56_17435 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AVL56_07895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D AVL56_02725 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AVL56_00275 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AVL56_01750 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AVL56_17400 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AVL56_17665 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AVL56_06900 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AVL56_00280 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AVL56_19895 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AVL56_07480 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 C 00970 Aminoacyl-tRNA biosynthesis [PATH:aaw00970] D AVL56_08300 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AVL56_13110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AVL56_16555 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AVL56_00380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_04965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_09900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_09905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_13575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_09350 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AVL56_09355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AVL56_07035 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_07040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_07045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_07050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_05445 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AVL56_07870 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AVL56_07925 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AVL56_07930 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AVL56_08295 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AVL56_02225 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_02230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_05450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_17145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_13570 tRNA-His K14226 tRNA-His; tRNA His D AVL56_13105 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AVL56_16550 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AVL56_05440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_06380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_07920 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_13565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_16135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_08905 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AVL56_08910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AVL56_08915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AVL56_04425 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_07915 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_11345 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_11350 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_01485 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AVL56_12410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AVL56_13560 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AVL56_13580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AVL56_05485 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_05495 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_05535 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_08895 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_09910 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_02350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AVL56_17140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AVL56_17155 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AVL56_09690 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AVL56_18010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AVL56_17150 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AVL56_07680 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08310 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08315 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08320 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08305 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AVL56_10675 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AVL56_08975 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AVL56_08435 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D AVL56_00040 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AVL56_00035 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AVL56_07490 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AVL56_05570 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AVL56_12460 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AVL56_12430 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AVL56_00095 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AVL56_16040 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AVL56_06430 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AVL56_13465 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AVL56_09610 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AVL56_09655 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AVL56_13600 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AVL56_13665 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AVL56_07335 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AVL56_07330 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AVL56_15850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AVL56_01965 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:aaw03008] D AVL56_13320 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AVL56_02220 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AVL56_14850 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:aaw03060] D AVL56_17390 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AVL56_18005 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AVL56_06385 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AVL56_13785 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AVL56_13780 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AVL56_03970 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AVL56_13790 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AVL56_19885 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AVL56_15245 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AVL56_02165 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AVL56_09155 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AVL56_09800 ffs; signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA D AVL56_17745 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D AVL56_02270 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D AVL56_02275 translocase K03117 tatB; sec-independent protein translocase protein TatB D AVL56_02280 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AVL56_13000 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AVL56_13325 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AVL56_13460 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:aaw04122] D AVL56_13730 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AVL56_05405 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AVL56_19695 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AVL56_05550 sulfur reduction protein DsrE K07236 tusC; tRNA 2-thiouridine synthesizing protein C D AVL56_05545 sulfur relay protein TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D AVL56_05560 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D AVL56_06590 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AVL56_11530 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AVL56_08335 moaA; cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AVL56_11535 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D AVL56_11550 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D AVL56_11540 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AVL56_11545 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D AVL56_00700 hypothetical protein K03154 thiS; sulfur carrier protein D AVL56_00705 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:aaw03018] D AVL56_02870 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AVL56_06925 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D AVL56_02310 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D AVL56_04555 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AVL56_06320 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AVL56_14885 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AVL56_16425 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AVL56_17465 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AVL56_03155 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AVL56_01035 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AVL56_14720 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AVL56_02320 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AVL56_11775 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_08065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AVL56_18960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AVL56_18225 RNA chaperone Hfq K03666 hfq; host factor-I protein D AVL56_04060 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AVL56_17790 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:aaw03030] D AVL56_07060 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_17035 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_04910 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AVL56_13050 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AVL56_06850 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AVL56_06440 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AVL56_16045 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AVL56_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AVL56_18300 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AVL56_03460 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AVL56_01205 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AVL56_07065 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AVL56_04905 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AVL56_00070 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AVL56_10870 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:aaw03410] D AVL56_09390 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AVL56_15515 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AVL56_01475 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AVL56_00290 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AVL56_18895 transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AVL56_00045 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AVL56_07255 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D AVL56_00070 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AVL56_03705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AVL56_10870 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:aaw03420] D AVL56_07285 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AVL56_01160 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AVL56_14710 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AVL56_09340 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AVL56_05460 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AVL56_01060 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AVL56_00070 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AVL56_10870 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:aaw03430] D AVL56_04565 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AVL56_18235 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D AVL56_02865 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D AVL56_01060 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AVL56_07135 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D AVL56_13640 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AVL56_13210 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AVL56_03705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AVL56_01205 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AVL56_04910 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AVL56_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AVL56_13050 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AVL56_06440 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AVL56_06850 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AVL56_07060 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_17035 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_16045 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AVL56_10870 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AVL56_01990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:aaw03440] D AVL56_03705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AVL56_01205 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AVL56_00015 DNA replication protein RecF K03629 recF; DNA replication and repair protein RecF D AVL56_03715 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AVL56_13025 recR; recombination protein RecR K06187 recR; recombination protein RecR D AVL56_04575 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AVL56_00070 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AVL56_08960 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AVL56_08955 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AVL56_08965 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AVL56_00850 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AVL56_11750 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D AVL56_11755 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D AVL56_11745 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D AVL56_04910 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AVL56_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AVL56_13050 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AVL56_06440 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AVL56_06850 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AVL56_07060 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_17035 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_16045 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AVL56_17660 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AVL56_19865 flavodoxin K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:aaw03250] D AVL56_03260 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses D AVL56_16820 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 03266 Virion - Herpesvirus D AVL56_09180 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:aaw02010] D AVL56_03335 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AVL56_03340 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AVL56_03345 bacitracin ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AVL56_11525 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D AVL56_11520 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AVL56_11515 hypothetical protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AVL56_06310 ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein D AVL56_00875 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AVL56_00880 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AVL56_00885 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AVL56_16240 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AVL56_16255 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D AVL56_16250 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D AVL56_16245 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein D AVL56_03905 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D AVL56_03900 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AVL56_03895 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AVL56_03910 sulfate transporter K07122 mlaB; phospholipid transport system transporter-binding protein D AVL56_03890 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AVL56_03550 phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein D AVL56_04070 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AVL56_04075 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AVL56_04080 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AVL56_03995 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AVL56_09855 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D AVL56_09860 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D AVL56_09865 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D AVL56_09870 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D AVL56_09875 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D AVL56_08365 heme ABC transporter permease K06073 btuC; vitamin B12 transport system permease protein D AVL56_08360 cobalamin ABC transporter ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D AVL56_04670 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D AVL56_04680 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein D AVL56_04675 polysaccharide/polyol phosphate ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D AVL56_04585 sodium ABC transporter permease K09696 natB; sodium transport system permease protein D AVL56_04580 ABC transporter K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D AVL56_07020 cell division protein FtsX K09808 lolC_E_F; lipoprotein-releasing system permease protein D AVL56_07275 ABC transporter substrate-binding protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D AVL56_07025 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AVL56_04620 transcriptional regulator K02196 ccmD; heme exporter protein D D AVL56_04615 heme ABC transporter permease K02195 ccmC; heme exporter protein C D AVL56_04610 heme ABC transporter permease K02194 ccmB; heme exporter protein B D AVL56_04605 cytochrome C biogenesis protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AVL56_16055 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D AVL56_16060 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AVL56_03860 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AVL56_17735 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AVL56_17740 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AVL56_10855 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AVL56_17625 ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AVL56_08340 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D AVL56_18015 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D AVL56_10400 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AVL56_18520 hypothetical protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D AVL56_18525 ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:aaw02060] D AVL56_07710 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AVL56_02875 hypothetical protein K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AVL56_03835 phosphate ABC transporter permease K08485 ptsO; phosphocarrier protein NPr D AVL56_03845 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:aaw03070] D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein D AVL56_19150 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D AVL56_19145 type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D AVL56_19160 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D AVL56_19165 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AVL56_19170 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D AVL56_19175 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D AVL56_19180 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D AVL56_19185 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D AVL56_19190 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D AVL56_19195 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D AVL56_19155 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AVL56_13785 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AVL56_03970 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AVL56_13780 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AVL56_18005 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AVL56_06385 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AVL56_17390 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AVL56_13790 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AVL56_19885 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AVL56_15245 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AVL56_17745 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D AVL56_02165 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AVL56_09155 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AVL56_02270 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D AVL56_02275 translocase K03117 tatB; sec-independent protein translocase protein TatB D AVL56_02280 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:aaw02020] D AVL56_03545 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AVL56_03540 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AVL56_13860 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1] D AVL56_17470 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AVL56_03550 phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein D AVL56_08235 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AVL56_08230 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AVL56_19120 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AVL56_19115 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AVL56_02145 histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AVL56_02140 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AVL56_12050 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AVL56_12055 two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D AVL56_15355 hypothetical protein K07796 cusC; outer membrane protein, copper/silver efflux system D AVL56_15350 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AVL56_15345 cation transporter K07787 cusA; copper/silver efflux system protein D AVL56_10140 flagellin K02406 fliC; flagellin D AVL56_10270 flagellin K02406 fliC; flagellin D AVL56_10275 flagellin K02406 fliC; flagellin D AVL56_10280 flagellin K02406 fliC; flagellin D AVL56_10030 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA D AVL56_13205 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D AVL56_15785 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D AVL56_01445 two-component system response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D AVL56_19395 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AVL56_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AVL56_01510 histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D AVL56_01515 two-component system response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR D AVL56_02040 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D AVL56_04580 ABC transporter K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D AVL56_04585 sodium ABC transporter permease K09696 natB; sodium transport system permease protein D AVL56_01915 two-component system sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AVL56_05465 sirA; two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AVL56_09915 carbon storage regulator K03563 csrA; carbon storage regulator D AVL56_18900 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D AVL56_15700 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D AVL56_15705 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR D AVL56_04830 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D AVL56_13385 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D AVL56_15995 glnL; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AVL56_16000 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AVL56_15985 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_03855 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AVL56_15205 methylation site containing protein K02650 pilA; type IV pilus assembly protein PilA D AVL56_09000 ATPase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AVL56_08990 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AVL56_01550 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AVL56_10345 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AVL56_03200 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D AVL56_00995 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01525 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_02475 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_02815 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03330 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03450 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03655 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_04215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_06140 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_09045 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_12355 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_13620 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_17530 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_18365 chemotaxis protein K03776 aer; aerotaxis receptor D AVL56_01540 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_09995 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_10000 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_01535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_10015 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_01530 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_09035 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_10025 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_01560 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_10010 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_10350 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_13865 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_03205 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D AVL56_12100 C4-dicarboxylate ABC transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D AVL56_12105 C4-dicarboxylate ABC transporter permease K11689 dctQ; TRAP-type transport system small permease protein D AVL56_12110 hypothetical protein K11690 dctM; TRAP-type transport system large permease protein D AVL56_10135 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AVL56_10130 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AVL56_10125 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AVL56_12600 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AVL56_16880 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AVL56_13855 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AVL56_03790 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AVL56_03795 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AVL56_03800 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AVL56_05275 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AVL56_05280 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AVL56_05285 cytochrome-c oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AVL56_05290 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AVL56_17520 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AVL56_18540 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AVL56_17525 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AVL56_18535 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AVL56_18530 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein D AVL56_14015 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D AVL56_08370 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D AVL56_12160 hypothetical protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D AVL56_04165 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D AVL56_03770 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor D AVL56_04280 hypothetical protein K07165 fecR; transmembrane sensor D AVL56_09480 hypothetical protein K07165 fecR; transmembrane sensor D AVL56_18775 hybrid sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D AVL56_09020 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D AVL56_09025 anti-anti-sigma factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D AVL56_10360 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecule (CAM) interaction C 04517 IgSF CAM signaling C 04518 Integrin signaling C 04519 Cadherin signaling # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis [PATH:aaw04144] D AVL56_16480 phospholipase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 04145 Phagocytosis D AVL56_13860 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1] C 04142 Lysosome biogenesis D AVL56_07115 acid phosphatase K14379 ACP5; tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2] C 04146 Peroxisome [PATH:aaw04146] D AVL56_03615 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_11765 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12805 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_18270 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D AVL56_05085 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D AVL56_12340 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D AVL56_06580 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AVL56_07180 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_14655 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AVL56_12365 catalase K03781 katE; catalase [EC:1.11.1.6] D AVL56_17125 catalase K03781 katE; catalase [EC:1.11.1.6] D AVL56_12275 superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D AVL56_09500 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04149 Peroxisome - yeast C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D AVL56_03790 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence C 04156 Integrated stress response (ISR) signaling pathway [PATH:aaw04156] D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AVL56_04425 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_07915 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_11345 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_11350 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_08065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AVL56_18960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:aaw02024] D AVL56_18225 RNA chaperone Hfq K03666 hfq; host factor-I protein D AVL56_08185 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AVL56_08190 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AVL56_04705 rhamnosyl transferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D AVL56_08355 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AVL56_09055 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AVL56_09000 ATPase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AVL56_08990 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AVL56_17810 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D AVL56_16030 signal peptide prediction K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AVL56_03995 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AVL56_03615 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_11765 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12805 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12600 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AVL56_16880 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AVL56_18280 XRE family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AVL56_01010 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AVL56_13255 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AVL56_12400 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AVL56_02825 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AVL56_19885 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AVL56_17455 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-] D AVL56_03970 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AVL56_18005 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AVL56_06385 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AVL56_17390 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AVL56_13790 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AVL56_15245 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AVL56_17745 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D AVL56_02165 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AVL56_09155 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AVL56_16415 hypothetical protein K08777 nprB; neutral peptidase B [EC:3.4.24.-] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:aaw02030] D AVL56_00995 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01525 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_02475 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_02815 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03330 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03450 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03655 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_04215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_06140 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_09045 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_12355 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_13620 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_17530 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_18365 chemotaxis protein K03776 aer; aerotaxis receptor D AVL56_01535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_10015 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_01540 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_09995 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_10000 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_01530 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_09035 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_10025 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_16515 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D AVL56_10020 protein phosphatase K03414 cheZ; chemotaxis protein CheZ D AVL56_18285 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D AVL56_01560 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_10010 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_03200 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D AVL56_10350 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_13865 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_01555 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D AVL56_01550 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AVL56_10345 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AVL56_10110 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AVL56_10080 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AVL56_10075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AVL56_13205 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D AVL56_13200 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:aaw02040] D AVL56_10120 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AVL56_10115 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AVL56_10110 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AVL56_10105 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D AVL56_10100 fliI; EscN/YscN/HrcN family type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AVL56_10095 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D AVL56_10090 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AVL56_00345 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AVL56_10085 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AVL56_10080 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AVL56_10075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AVL56_10070 cell wall biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D AVL56_10065 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AVL56_10060 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AVL56_10055 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AVL56_10045 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AVL56_10050 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AVL56_10355 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AVL56_10340 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AVL56_10335 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AVL56_10330 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D AVL56_10325 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D AVL56_10320 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AVL56_10315 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AVL56_02125 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D AVL56_10310 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D AVL56_10305 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D AVL56_10300 glucosaminidase K02395 flgJ; peptidoglycan hydrolase FlgJ D AVL56_10295 flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AVL56_10290 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D AVL56_10370 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP D AVL56_17480 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX D AVL56_09455 hypothetical protein K21218 motY; sodium-type flagellar protein MotY D AVL56_10140 flagellin K02406 fliC; flagellin D AVL56_10270 flagellin K02406 fliC; flagellin D AVL56_10275 flagellin K02406 fliC; flagellin D AVL56_10280 flagellin K02406 fliC; flagellin D AVL56_10260 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D AVL56_10255 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AVL56_13205 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D AVL56_13200 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AVL56_10360 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AVL56_10365 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D AVL56_03455 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AVL56_10135 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AVL56_03855 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AVL56_10125 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AVL56_10030 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AVL56_04555 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagosome formation C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:aaw04981] D AVL56_15095 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D AVL56_02760 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AVL56_00515 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_13265 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AVL56_02890 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AVL56_09975 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:aaw04980] D AVL56_07295 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AVL56_09975 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:aaw01501] D AVL56_02910 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AVL56_02415 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AVL56_07305 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AVL56_18900 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D AVL56_14495 energy transducer TonB K02172 blaR1; bla regulator protein blaR1 D AVL56_14490 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D AVL56_00965 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_06195 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_09115 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_18330 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_00970 multidrug transporter K18138 acrB; multidrug efflux pump D AVL56_03435 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_06200 acriflavin resistance protein K18138 acrB; multidrug efflux pump D AVL56_09120 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_18335 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AVL56_02825 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein D AVL56_02035 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AVL56_06460 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AVL56_15315 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AVL56_12995 hypothetical protein K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:aaw01502] D AVL56_15275 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AVL56_02445 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AVL56_15305 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AVL56_15300 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AVL56_15285 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aaw01503] D AVL56_08235 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AVL56_08230 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AVL56_09855 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D AVL56_09860 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D AVL56_09865 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D AVL56_09870 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D AVL56_09875 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D AVL56_02145 histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AVL56_02140 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AVL56_18240 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AVL56_03360 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AVL56_03260 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AVL56_00965 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_06195 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_09115 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_18330 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_00970 multidrug transporter K18138 acrB; multidrug efflux pump D AVL56_03435 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_06200 acriflavin resistance protein K18138 acrB; multidrug efflux pump D AVL56_09120 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_18335 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein D AVL56_04895 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:aaw01000] C 01001 Protein kinases [BR:aaw01001] D AVL56_14850 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D AVL56_14205 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D AVL56_14780 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D AVL56_07450 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AVL56_14025 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D AVL56_03545 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AVL56_08235 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AVL56_19120 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AVL56_02145 histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AVL56_12050 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AVL56_15785 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D AVL56_01510 histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D AVL56_12295 ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AVL56_12985 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AVL56_01915 two-component system sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AVL56_15700 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D AVL56_15995 glnL; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AVL56_09000 ATPase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AVL56_16225 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AVL56_16520 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AVL56_01535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_10015 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_03205 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D AVL56_10130 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AVL56_18775 hybrid sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:aaw01009] D AVL56_16165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_10505 calcium sensor EFh K02183 CALM; calmodulin D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AVL56_16375 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D AVL56_16410 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D AVL56_13295 SerB protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:aaw01002] D AVL56_13460 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D AVL56_15215 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AVL56_13630 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AVL56_17625 ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AVL56_12550 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AVL56_15790 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AVL56_18865 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AVL56_09305 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AVL56_14605 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D AVL56_04200 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D AVL56_05125 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AVL56_06825 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D AVL56_17575 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D AVL56_01795 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D AVL56_16415 hypothetical protein K08777 nprB; neutral peptidase B [EC:3.4.24.-] D AVL56_09935 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D AVL56_18025 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D AVL56_14285 peptidase K05996 cpt; carboxypeptidase T [EC:3.4.17.18] D AVL56_09180 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] D AVL56_09590 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AVL56_16050 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AVL56_17770 aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D AVL56_00490 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_14340 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_15340 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_09095 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D AVL56_14270 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D AVL56_07720 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AVL56_13525 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AVL56_03785 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D AVL56_07545 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D AVL56_06815 hypothetical protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D AVL56_04835 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AVL56_08605 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AVL56_02705 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D AVL56_15065 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AVL56_06405 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AVL56_01575 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AVL56_05875 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D AVL56_04875 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D AVL56_14495 energy transducer TonB K02172 blaR1; bla regulator protein blaR1 D AVL56_03930 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D AVL56_03925 serine protease K04691 hhoB; serine protease DegS [EC:3.4.21.-] D AVL56_17455 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-] D AVL56_16820 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D AVL56_12755 protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D AVL56_06475 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AVL56_13550 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AVL56_13540 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AVL56_19435 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AVL56_04780 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AVL56_13000 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AVL56_13325 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AVL56_17705 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AVL56_05110 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AVL56_07310 hydrolase K01434 pac; penicillin G amidase [EC:3.5.1.11] D AVL56_06525 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D AVL56_10655 protease K04774 sohB; serine protease SohB [EC:3.4.21.-] D AVL56_08375 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D AVL56_00340 rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D AVL56_06020 rhombosortase K28165 rrtA; rhombosortase D AVL56_17650 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D AVL56_01870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_02405 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_06010 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AVL56_07530 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D AVL56_14425 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D AVL56_01430 metalloprotease PmbA K03592 pmbA; PmbA protein D AVL56_01415 tldD; metalloprotease TldD K03568 tldD; TldD protein D AVL56_08655 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D AVL56_18210 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D AVL56_08650 HflK protein K04088 hflK; modulator of FtsH protease HflK D AVL56_18215 membrane protease HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:aaw01003] D AVL56_17285 hypothetical protein K00737 MGAT3; beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144] D AVL56_01455 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AVL56_16795 cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D AVL56_01830 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AVL56_02035 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AVL56_15290 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_06465 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_04695 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AVL56_19240 glucosyl transferase family 2 K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D AVL56_08640 hypothetical protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D AVL56_05965 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] D AVL56_07385 hypothetical protein K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:aaw01005] D AVL56_04895 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AVL56_04900 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AVL56_15255 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AVL56_13270 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AVL56_12470 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AVL56_10850 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AVL56_14065 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AVL56_01770 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AVL56_03600 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AVL56_00300 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D AVL56_07830 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AVL56_10840 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AVL56_17325 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AVL56_03875 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AVL56_03880 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AVL56_01765 lipopolysaccharide heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AVL56_00305 glycosyl transferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D AVL56_15660 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AVL56_10585 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AVL56_14040 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AVL56_04705 rhamnosyl transferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D AVL56_04695 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aaw01011] D AVL56_03920 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AVL56_17170 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AVL56_15280 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AVL56_15295 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AVL56_15310 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AVL56_15275 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AVL56_02445 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AVL56_15300 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AVL56_15285 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AVL56_03500 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AVL56_01105 Type II phosphatidic acid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D AVL56_13475 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AVL56_02035 penicillin-sensitive transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AVL56_01830 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D AVL56_06460 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AVL56_15315 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AVL56_06475 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AVL56_15290 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_06465 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_06815 hypothetical protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D AVL56_02700 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AVL56_01820 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AVL56_12790 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AVL56_12445 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D AVL56_04945 lytic murein transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D AVL56_06860 ABC transporter substrate-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D AVL56_06470 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AVL56_18240 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AVL56_15190 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:aaw01004] D AVL56_06885 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AVL56_06890 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AVL56_12605 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AVL56_06870 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AVL56_06730 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_06880 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_10185 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_14250 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_16335 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AVL56_05190 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AVL56_04890 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AVL56_16945 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D AVL56_08265 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AVL56_05075 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] D AVL56_01040 hypothetical protein K01073 yigI; acyl-CoA thioesterase [EC:3.1.2.-] D AVL56_16590 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D AVL56_12670 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D AVL56_17090 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AVL56_08045 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D AVL56_03615 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_11765 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12805 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_19535 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D AVL56_06895 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AVL56_03485 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AVL56_16010 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:aaw01008] D AVL56_05365 hypothetical protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D AVL56_16115 hypothetical protein K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62] D AVL56_16120 phosphopantetheine-binding protein K24112 asbE; petrobactin synthase [EC:2.-.-.-] D AVL56_15035 hypothetical protein K21162 sgcE4; enediyne biosynthesis protein E4 C 01006 Prenyltransferases [BR:aaw01006] D AVL56_13215 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AVL56_02715 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AVL56_04860 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AVL56_18230 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AVL56_00355 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AVL56_14570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_19390 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:aaw01007] D AVL56_08305 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AVL56_10675 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AVL56_17785 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AVL56_15850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AVL56_01965 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AVL56_12460 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AVL56_09655 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AVL56_12430 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AVL56_13465 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AVL56_16040 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AVL56_06430 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AVL56_09610 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AVL56_08975 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AVL56_08435 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D AVL56_13665 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AVL56_00040 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AVL56_00035 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AVL56_05570 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AVL56_13600 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AVL56_07490 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AVL56_07335 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AVL56_07330 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AVL56_06050 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D AVL56_06220 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D AVL56_11730 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_12900 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_16505 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AVL56_00325 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D AVL56_08390 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AVL56_05475 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AVL56_15965 aminotransferase class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AVL56_00770 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AVL56_01950 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AVL56_08400 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AVL56_01885 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AVL56_06165 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AVL56_19550 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AVL56_05085 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D AVL56_05645 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AVL56_07540 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D AVL56_10225 hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:aaw00194] D AVL56_19795 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AVL56_19800 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AVL56_19805 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AVL56_19810 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AVL56_19815 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AVL56_19820 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AVL56_19825 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AVL56_19830 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AVL56_19835 ATPase F0F1 K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:aaw03000] D AVL56_04345 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AVL56_08670 hypothetical protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D AVL56_19365 hypothetical protein K13652 K13652; AraC family transcriptional regulator D AVL56_18895 transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AVL56_00495 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D AVL56_00560 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AVL56_07820 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AVL56_14745 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AVL56_19565 transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D AVL56_09965 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D AVL56_17225 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D AVL56_04100 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D AVL56_09960 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D AVL56_00940 LysR family transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D AVL56_05015 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D AVL56_08825 nodulation protein NfeD K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D AVL56_05000 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D AVL56_08890 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D AVL56_16490 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D AVL56_18755 LysR family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D AVL56_00765 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D AVL56_09335 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D AVL56_11795 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D AVL56_01285 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D AVL56_01180 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AVL56_04150 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AVL56_12115 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AVL56_15005 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AVL56_18380 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AVL56_19750 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AVL56_06745 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D AVL56_12210 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D AVL56_01610 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AVL56_08730 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AVL56_06160 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D AVL56_18460 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D AVL56_12760 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D AVL56_15180 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AVL56_16280 GntR family transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D AVL56_16440 GntR family transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D AVL56_08680 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D AVL56_09940 transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D AVL56_00230 TetR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D AVL56_00760 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D AVL56_07615 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D AVL56_08485 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D AVL56_01895 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D AVL56_16580 GntR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D AVL56_05595 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AVL56_09810 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D AVL56_17535 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D AVL56_14705 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D AVL56_04190 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AVL56_05705 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AVL56_14260 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D AVL56_06145 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AVL56_18280 XRE family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AVL56_12600 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AVL56_16880 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AVL56_05315 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D AVL56_13735 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D AVL56_15570 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AVL56_11815 ArsR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D AVL56_03525 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D AVL56_06675 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D AVL56_12380 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D AVL56_11995 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AVL56_14490 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D AVL56_17165 BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AVL56_19055 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AVL56_14670 hypothetical protein K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D AVL56_10135 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AVL56_15805 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator D AVL56_17680 transcriptional regulator K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D AVL56_02820 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AVL56_03275 transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D AVL56_19840 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AVL56_16970 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D AVL56_09825 TyrR family transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D AVL56_05860 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D AVL56_14325 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D AVL56_09850 AAA family ATPase K03974 pspF; psp operon transcriptional activator D AVL56_09835 phage shock protein C K03973 pspC; phage shock protein C D AVL56_15425 hypothetical protein K07735 algH; putative transcriptional regulator D AVL56_17780 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D AVL56_18840 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AVL56_13260 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D AVL56_15330 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:aaw03021] D AVL56_17370 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AVL56_17975 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AVL56_17970 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AVL56_00830 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AVL56_03455 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AVL56_02765 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D AVL56_04105 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AVL56_13165 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AVL56_13350 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AVL56_16070 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AVL56_19600 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AVL56_17720 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D AVL56_03855 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AVL56_10030 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA D AVL56_02930 RNA polymerase-binding ATPase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D AVL56_11325 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AVL56_13235 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D AVL56_18000 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AVL56_03805 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D AVL56_03810 stringent starvation protein B K03600 sspB; stringent starvation protein B D AVL56_11285 sigma factor SigB regulation protein RsbQ K19707 rsbQ; sigma-B regulation protein RsbQ D AVL56_13345 transcriptional regulator K03597 rseA; sigma-E factor negative regulatory protein RseA D AVL56_13340 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D AVL56_13335 transcriptional regulator K03803 rseC; sigma-E factor negative regulatory protein RseC D AVL56_17780 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D AVL56_18840 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AVL56_08020 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AVL56_19305 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D AVL56_02320 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:aaw03019] D AVL56_06925 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D AVL56_01400 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AVL56_13320 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AVL56_11775 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D AVL56_17465 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AVL56_02220 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AVL56_02310 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D AVL56_14885 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AVL56_16425 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AVL56_03155 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AVL56_01035 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AVL56_14720 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AVL56_04555 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AVL56_06320 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AVL56_02320 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AVL56_10530 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D AVL56_08065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AVL56_18960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AVL56_18225 RNA chaperone Hfq K03666 hfq; host factor-I protein D AVL56_04060 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AVL56_17790 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AVL56_02870 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AVL56_09915 carbon storage regulator K03563 csrA; carbon storage regulator D AVL56_01110 ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D AVL56_16015 regulator K09893 rraB; regulator of ribonuclease activity B D AVL56_03840 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ D AVL56_07090 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D AVL56_01815 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:aaw03011] D AVL56_05630 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AVL56_04840 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AVL56_01740 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AVL56_17375 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AVL56_17405 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AVL56_18350 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AVL56_17960 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AVL56_17420 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AVL56_03760 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AVL56_01705 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AVL56_17380 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AVL56_17965 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AVL56_17385 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AVL56_17425 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AVL56_11305 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AVL56_09090 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AVL56_01755 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AVL56_18345 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AVL56_01730 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AVL56_13480 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AVL56_03470 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AVL56_17990 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AVL56_01725 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AVL56_01710 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AVL56_01715 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AVL56_17430 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AVL56_17415 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AVL56_18340 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AVL56_17985 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AVL56_17995 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AVL56_17980 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AVL56_03755 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AVL56_17440 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AVL56_17395 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AVL56_01745 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AVL56_17365 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AVL56_17410 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AVL56_09075 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AVL56_07475 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AVL56_02720 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AVL56_01735 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AVL56_01720 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AVL56_17435 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AVL56_02725 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AVL56_00275 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AVL56_01750 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AVL56_17400 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AVL56_17665 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AVL56_06900 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AVL56_00280 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AVL56_19895 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AVL56_07480 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AVL56_07895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D AVL56_00155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_01660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_13115 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_16560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_17195 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_00165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_01670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_13100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_16545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_17185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_00170 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_01675 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_13095 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_16540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_17180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:aaw03009] D AVL56_13320 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AVL56_14850 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D AVL56_02220 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AVL56_13315 GTPase Era K03595 era; GTPase D AVL56_02730 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D AVL56_17780 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D AVL56_18840 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AVL56_11325 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AVL56_13235 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D AVL56_18000 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AVL56_03670 rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AVL56_00090 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AVL56_01460 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AVL56_17750 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AVL56_15415 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AVL56_19850 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AVL56_15325 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AVL56_15645 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AVL56_00855 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D AVL56_10590 rRNA (guanine-N1)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D AVL56_17460 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AVL56_06410 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D AVL56_14255 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D AVL56_03265 23S rRNA (guanine(1835)-N(2))-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D AVL56_06455 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AVL56_07075 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AVL56_05065 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D AVL56_05165 rlmL; 23S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D AVL56_07805 50S rRNA methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D AVL56_13685 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AVL56_03730 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D AVL56_02925 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AVL56_09600 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AVL56_08160 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AVL56_06920 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AVL56_13150 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AVL56_06585 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D AVL56_10500 23S rRNA pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D AVL56_09680 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338] D AVL56_14275 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D AVL56_17065 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D AVL56_09085 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D AVL56_10830 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D AVL56_19045 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D AVL56_09535 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D AVL56_06610 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D AVL56_06925 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D AVL56_01400 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AVL56_15430 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AVL56_18035 ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D AVL56_03155 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AVL56_04495 RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D AVL56_02215 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AVL56_13650 ribosome biogenesis GTPase Der K03977 engA; GTPase D AVL56_14165 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D AVL56_18220 GTPase HflX K03665 hflX; GTPase D AVL56_00125 L-threonylcarbamoyladenylate synthase TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AVL56_00835 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AVL56_11315 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AVL56_11330 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D AVL56_06450 ribosome silencing factor K09710 ybeB; ribosome-associated protein D AVL56_07970 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D AVL56_06415 RNA-binding protein K07574 yhbY; RNA-binding protein D AVL56_01425 hypothetical protein K09889 yjgA; ribosome-associated protein D AVL56_05185 ribosome modulation factor K03812 rmf; ribosome modulation factor D AVL56_03850 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D AVL56_07905 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D AVL56_06905 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:aaw03016] D AVL56_04500 CCA-adding protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D AVL56_08305 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AVL56_13600 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AVL56_13465 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AVL56_06430 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AVL56_12430 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AVL56_10675 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AVL56_09655 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AVL56_09610 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AVL56_08975 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AVL56_08435 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D AVL56_07490 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AVL56_05570 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AVL56_12460 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AVL56_16040 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AVL56_13665 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AVL56_07335 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AVL56_07330 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AVL56_15850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AVL56_01965 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AVL56_17710 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D AVL56_03505 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AVL56_07960 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AVL56_01465 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D AVL56_13595 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D AVL56_12575 truA; tRNA pseudouridine(38,39,40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AVL56_11310 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AVL56_02790 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D AVL56_13730 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AVL56_00125 L-threonylcarbamoyladenylate synthase TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AVL56_18230 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AVL56_19875 trmE; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D AVL56_19855 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AVL56_09270 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AVL56_19230 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AVL56_19890 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D AVL56_03980 rnpB; RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component D AVL56_09460 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D AVL56_19705 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AVL56_12800 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D AVL56_01810 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D AVL56_13275 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D AVL56_00040 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AVL56_00035 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AVL56_17785 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AVL56_07315 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D AVL56_04940 cytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D AVL56_16670 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D AVL56_19050 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D AVL56_08280 tRNA dihydrouridine synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D AVL56_05945 tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D AVL56_05950 tRNA 5-methoxyuridine(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D AVL56_10625 SAM-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D AVL56_16575 tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D AVL56_09080 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AVL56_00845 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D AVL56_13745 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D AVL56_02155 tRNA (cytosine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D AVL56_16810 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D AVL56_14170 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D AVL56_04815 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D AVL56_02925 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AVL56_09600 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AVL56_06590 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AVL56_05325 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D AVL56_19695 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AVL56_05550 sulfur reduction protein DsrE K07236 tusC; tRNA 2-thiouridine synthesizing protein C D AVL56_05545 sulfur relay protein TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D AVL56_05560 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D AVL56_13705 ATPase K13628 iscA; iron-sulfur cluster assembly protein D AVL56_13375 glycine cleavage system protein T K06980 ygfZ; tRNA-modifying protein YgfZ D AVL56_12540 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D AVL56_12615 methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D AVL56_13800 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D AVL56_09320 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AVL56_09315 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AVL56_04745 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AVL56_18255 tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D AVL56_13795 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D AVL56_04920 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D AVL56_09720 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D AVL56_12825 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AVL56_03475 tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AVL56_18245 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AVL56_10805 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D AVL56_17465 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AVL56_06320 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:aaw03012] D AVL56_09030 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D AVL56_11320 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AVL56_07485 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AVL56_19270 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AVL56_04845 elongation factor Ts K02357 tsf; elongation factor Ts D AVL56_07800 elongation factor G K02355 fusA; elongation factor G D AVL56_17955 fusA; elongation factor G K02355 fusA; elongation factor G D AVL56_07850 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AVL56_04855 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D AVL56_07845 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AVL56_07900 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D AVL56_06560 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AVL56_03235 elongation factor P K02356 efp; elongation factor P D AVL56_18585 elongation factor P-like protein YeiP K02356 efp; elongation factor P D AVL56_03240 poxB regulator PoxA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D AVL56_03230 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D AVL56_12645 ABC transporter ATP-binding protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D AVL56_09615 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D AVL56_09660 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D AVL56_18695 peptidyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:aaw03110] D AVL56_06565 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D AVL56_13140 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AVL56_13545 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AVL56_17645 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AVL56_08065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AVL56_01155 heat-shock protein Hsp70 K04046 yegD; hypothetical chaperone protein D AVL56_18960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AVL56_08060 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AVL56_14755 DNA-binding protein K05516 cbpA; curved DNA-binding protein D AVL56_03690 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D AVL56_19135 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D AVL56_08070 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AVL56_07995 molecular chaperone K04080 ibpA; molecular chaperone IbpA D AVL56_19140 heat-shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D AVL56_18965 groES; co-chaperone GroES K04078 groES; chaperonin GroES D AVL56_06405 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AVL56_19830 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AVL56_02165 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AVL56_02135 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D AVL56_12285 repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy D AVL56_02355 hypothetical protein K09796 pccA; periplasmic copper chaperone A D AVL56_17455 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-] D AVL56_03260 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AVL56_12465 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D AVL56_13530 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D AVL56_19295 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D AVL56_16950 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AVL56_13455 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D AVL56_13380 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D AVL56_18935 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D AVL56_03680 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D AVL56_02315 thioredoxin K03671 TXN; thioredoxin D AVL56_02375 co-chaperone YbbN K05838 ybbN; putative thioredoxin D AVL56_02170 glutaredoxin K03676 grxC; glutaredoxin 3 D AVL56_09495 glutaredoxin K07390 grxD; monothiol glutaredoxin D AVL56_03360 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AVL56_12770 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D AVL56_03700 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AVL56_18975 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D AVL56_04635 disulfide bond formation protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:aaw04131] D AVL56_16480 phospholipase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D AVL56_13690 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AVL56_10505 calcium sensor EFh K02183 CALM; calmodulin D AVL56_12480 flotillin K07192 FLOT; flotillin D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_11925 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_11960 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_01685 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AVL56_12000 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:aaw04121] C 03051 Proteasome [BR:aaw03051] D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:aaw03032] D AVL56_07065 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AVL56_04345 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AVL56_13535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AVL56_07325 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AVL56_05625 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AVL56_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AVL56_18300 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AVL56_19860 flavodoxin K02315 dnaC; DNA replication protein DnaC D AVL56_03460 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AVL56_01205 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AVL56_04910 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AVL56_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AVL56_16045 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AVL56_06440 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AVL56_06850 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AVL56_07060 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_17035 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_13050 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AVL56_04905 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AVL56_00070 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AVL56_10870 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AVL56_01990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AVL56_07765 SeqA protein K03645 seqA; negative modulator of initiation of replication D AVL56_05905 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D AVL56_05650 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AVL56_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AVL56_01920 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AVL56_03195 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AVL56_06350 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AVL56_07000 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:aaw03036] D AVL56_04345 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AVL56_13320 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AVL56_10505 calcium sensor EFh K02183 CALM; calmodulin D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_12480 flotillin K07192 FLOT; flotillin D AVL56_06120 histone K03746 hns; DNA-binding protein H-NS D AVL56_13535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AVL56_07325 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AVL56_05625 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AVL56_14755 DNA-binding protein K05516 cbpA; curved DNA-binding protein D AVL56_14750 chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM D AVL56_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AVL56_02360 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D AVL56_19055 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AVL56_18225 RNA chaperone Hfq K03666 hfq; host factor-I protein D AVL56_00940 LysR family transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D AVL56_05595 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AVL56_10570 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D AVL56_10880 chromosome partitioning protein ParA K03529 smc; chromosome segregation protein D AVL56_08170 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D AVL56_08165 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D AVL56_15265 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AVL56_02805 cell division protein FtsB K05589 ftsB; cell division protein FtsB D AVL56_17740 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AVL56_15315 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AVL56_05590 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AVL56_15320 cell division protein FtsL K03586 ftsL; cell division protein FtsL D AVL56_17655 cell division protein FtsN K03591 ftsN; cell division protein FtsN D AVL56_15270 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D AVL56_15290 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_17735 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AVL56_15260 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AVL56_10875 hypothetical protein K03528 zipA; cell division protein ZipA D AVL56_15225 cell division protein ZapD K18778 zapD; cell division protein ZapD D AVL56_03940 ATPase K06916 zapE; cell division protein ZapE D AVL56_14370 ATPase K06916 zapE; cell division protein ZapE D AVL56_18240 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AVL56_00965 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_06195 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_09115 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_18330 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_15920 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D AVL56_15915 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D AVL56_15910 cell division topological specificity factor K03608 minE; cell division topological specificity factor D AVL56_00230 TetR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D AVL56_07765 SeqA protein K03645 seqA; negative modulator of initiation of replication D AVL56_01380 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AVL56_06690 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AVL56_01385 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D AVL56_01390 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D AVL56_06465 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_10005 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AVL56_19845 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AVL56_19840 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AVL56_01920 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AVL56_03195 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AVL56_19855 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AVL56_19850 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AVL56_01075 xerC; recombinase XerC K03733 xerC; integrase/recombinase XerC D AVL56_03695 recombinase XerD K04763 xerD; integrase/recombinase XerD D AVL56_12425 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AVL56_00065 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:aaw03400] D AVL56_18890 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AVL56_05205 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AVL56_15515 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AVL56_01475 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AVL56_09390 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AVL56_01115 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D AVL56_15240 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AVL56_05210 deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D AVL56_18895 transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AVL56_00045 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AVL56_00290 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AVL56_07255 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D AVL56_03705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AVL56_10870 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AVL56_00070 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AVL56_01160 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AVL56_14710 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AVL56_09340 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AVL56_05460 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AVL56_01060 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AVL56_17975 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AVL56_17970 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AVL56_17370 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AVL56_00830 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AVL56_07285 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AVL56_04565 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AVL56_18235 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D AVL56_02865 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D AVL56_07135 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D AVL56_13640 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AVL56_13210 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AVL56_04910 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AVL56_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AVL56_16045 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AVL56_06440 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AVL56_06850 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AVL56_07060 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_17035 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AVL56_13050 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AVL56_01205 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AVL56_01990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AVL56_11750 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D AVL56_11755 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D AVL56_11745 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D AVL56_04575 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AVL56_08960 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AVL56_08955 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AVL56_08965 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AVL56_17660 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AVL56_19865 flavodoxin K02317 dnaT; DNA replication protein DnaT D AVL56_04225 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D AVL56_04220 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D AVL56_13285 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D AVL56_00015 DNA replication protein RecF K03629 recF; DNA replication and repair protein RecF D AVL56_00850 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AVL56_03715 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AVL56_13025 recR; recombination protein RecR K06187 recR; recombination protein RecR D AVL56_08115 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D AVL56_03530 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D AVL56_05650 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AVL56_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AVL56_06350 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AVL56_07000 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AVL56_13535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AVL56_19055 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AVL56_07325 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AVL56_05625 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AVL56_01035 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AVL56_14720 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AVL56_06120 histone K03746 hns; DNA-binding protein H-NS D AVL56_16900 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D AVL56_04775 XRE family transcriptional regulator K03502 umuC; DNA polymerase V D AVL56_04780 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AVL56_19435 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AVL56_16530 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D AVL56_00195 DNA repair nucleotidyltransferase K14161 imuB; protein ImuB D AVL56_00190 DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D AVL56_09925 RecX family transcriptional regulator K03565 recX; regulatory protein D AVL56_00365 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D AVL56_12830 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D AVL56_18120 DNA ligase-associated DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D AVL56_05660 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AVL56_05665 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:aaw03029] D AVL56_03795 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AVL56_11320 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AVL56_07485 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AVL56_04845 elongation factor Ts K02357 tsf; elongation factor Ts D AVL56_07800 elongation factor G K02355 fusA; elongation factor G D AVL56_17955 fusA; elongation factor G K02355 fusA; elongation factor G D AVL56_13315 GTPase Era K03595 era; GTPase D AVL56_15850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AVL56_06430 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AVL56_08975 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AVL56_09655 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AVL56_01205 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AVL56_04880 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AVL56_08065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AVL56_08070 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AVL56_18960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AVL56_18965 groES; co-chaperone GroES K04078 groES; chaperonin GroES D AVL56_08060 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AVL56_13730 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AVL56_09495 glutaredoxin K07390 grxD; monothiol glutaredoxin D AVL56_12425 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AVL56_14570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_19390 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AVL56_19420 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AVL56_19395 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D AVL56_19885 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AVL56_19405 cytochrome oxidase biogenesis protein K14998 SURF1; surfeit locus 1 family protein D AVL56_14300 electron transporter K07152 SCO1; protein SCO1 D AVL56_19385 electron transporter SenC K07152 SCO1; protein SCO1 D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:aaw02000] D AVL56_10855 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AVL56_17625 ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AVL56_08340 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D AVL56_18015 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D AVL56_09110 ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AVL56_10400 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AVL56_18520 hypothetical protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D AVL56_18525 ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D AVL56_05175 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D AVL56_16420 hypothetical protein K21397 K21397; ABC transport system ATP-binding/permease protein D AVL56_11525 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D AVL56_11520 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AVL56_11515 hypothetical protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AVL56_06310 ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein D AVL56_03335 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AVL56_03340 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AVL56_03345 bacitracin ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AVL56_00875 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AVL56_00880 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AVL56_00885 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AVL56_16030 signal peptide prediction K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D AVL56_11175 ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein D AVL56_11170 ABC transporter ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein D AVL56_16240 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AVL56_16255 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D AVL56_16250 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D AVL56_16245 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein D AVL56_03900 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AVL56_03895 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AVL56_03890 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AVL56_03905 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D AVL56_03910 sulfate transporter K07122 mlaB; phospholipid transport system transporter-binding protein D AVL56_15865 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D AVL56_03550 phosphate ABC transporter K02040 pstS; phosphate transport system substrate-binding protein D AVL56_04070 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AVL56_04075 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AVL56_04080 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AVL56_03995 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AVL56_02470 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AVL56_04960 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AVL56_12255 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AVL56_17505 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AVL56_17855 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AVL56_19040 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AVL56_09855 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D AVL56_09860 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D AVL56_09865 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D AVL56_09870 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D AVL56_09875 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D AVL56_18410 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D AVL56_18405 iron ABC transporter K25133 hmuU; heme transport system permease protein D AVL56_18400 heme ABC transporter ATPase K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D AVL56_08365 heme ABC transporter permease K06073 btuC; vitamin B12 transport system permease protein D AVL56_08360 cobalamin ABC transporter ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D AVL56_04680 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein D AVL56_04670 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D AVL56_04675 polysaccharide/polyol phosphate ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D AVL56_16055 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D AVL56_16060 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AVL56_03860 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AVL56_04585 sodium ABC transporter permease K09696 natB; sodium transport system permease protein D AVL56_04580 ABC transporter K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D AVL56_07020 cell division protein FtsX K09808 lolC_E_F; lipoprotein-releasing system permease protein D AVL56_07275 ABC transporter substrate-binding protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D AVL56_07025 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AVL56_04620 transcriptional regulator K02196 ccmD; heme exporter protein D D AVL56_04615 heme ABC transporter permease K02195 ccmC; heme exporter protein C D AVL56_04610 heme ABC transporter permease K02194 ccmB; heme exporter protein B D AVL56_04605 cytochrome C biogenesis protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AVL56_17735 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AVL56_17740 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AVL56_00640 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AVL56_05820 delta 1-pyrroline-5-carboxylate reductase K01992 ABC-2.P; ABC-2 type transport system permease protein D AVL56_05825 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AVL56_17825 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AVL56_05815 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AVL56_17830 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AVL56_08255 cell division protein FtsX K02004 ABC.CD.P; putative ABC transport system permease protein D AVL56_09555 cell division protein FtsX K02004 ABC.CD.P; putative ABC transport system permease protein D AVL56_09560 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D AVL56_18795 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AVL56_08260 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AVL56_09565 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AVL56_18800 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AVL56_13720 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D AVL56_15755 sodium transporter K14388 SLC5A8_12; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 D AVL56_07300 sodium:dicarboxylate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D AVL56_12415 sodium:dicarboxylate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D AVL56_17105 sodium:phosphate symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D AVL56_05980 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D AVL56_09345 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D AVL56_14955 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D AVL56_16100 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D AVL56_19370 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D AVL56_02980 MFS transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D AVL56_15010 galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D AVL56_14465 MFS transporter K02429 fucP; MFS transporter, FHS family, fucose-galactose-glucose:H+ symporter family protein D AVL56_15870 fucose permease K02429 fucP; MFS transporter, FHS family, fucose-galactose-glucose:H+ symporter family protein D AVL56_18425 MFS transporter K02429 fucP; MFS transporter, FHS family, fucose-galactose-glucose:H+ symporter family protein D AVL56_12330 hypothetical protein K06141 tsgA; MFS transporter, TsgA protein D AVL56_16325 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AVL56_16350 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AVL56_09525 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D AVL56_08560 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D AVL56_02910 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AVL56_19575 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AVL56_11040 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AVL56_14935 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D AVL56_02875 hypothetical protein K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AVL56_03835 phosphate ABC transporter permease K08485 ptsO; phosphocarrier protein NPr D AVL56_07710 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D AVL56_03845 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D AVL56_13820 potassium channel protein K10716 kch; voltage-gated potassium channel D AVL56_19080 potassium channel protein K10716 kch; voltage-gated potassium channel D AVL56_03165 ion transporter K08714 VGSC; voltage-gated sodium channel D AVL56_01865 ammonium transporter K03320 amt; ammonium transporter, Amt family D AVL56_01030 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_06965 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_12680 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_14430 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_15495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_18160 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_19780 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AVL56_03805 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D AVL56_09220 IMP dehydrogenase K07114 yfbK; Ca-activated chloride channel homolog D AVL56_09225 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AVL56_05540 hypothetical protein K19416 yccA; modulator of FtsH protease D AVL56_07785 formate transporter K21993 fdhC; formate transporter D AVL56_00905 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D AVL56_11365 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel D AVL56_15410 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D AVL56_16710 mechanosensitive ion channel protein MscS K16053 ybdG; miniconductance mechanosensitive channel D AVL56_01045 magnesium transporter K06213 mgtE; magnesium transporter D AVL56_03830 magnesium transporter K06213 mgtE; magnesium transporter D AVL56_13205 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D AVL56_13200 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AVL56_17480 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX D AVL56_09455 hypothetical protein K21218 motY; sodium-type flagellar protein MotY D AVL56_03575 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB D AVL56_03580 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AVL56_09740 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D AVL56_09745 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D AVL56_03585 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AVL56_09735 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AVL56_16770 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AVL56_08945 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D AVL56_08940 protein TolR K03560 tolR; biopolymer transport protein TolR D AVL56_01000 magnesium transporter CorA K16074 zntB; zinc transporter D AVL56_05575 chromosome condensation protein CrcB K06199 crcB; fluoride exporter D AVL56_09165 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AVL56_17895 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D AVL56_18295 flagellar motor protein MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D AVL56_18760 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein D AVL56_17845 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D AVL56_19525 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D AVL56_03105 hypothetical protein K16092 btuB; vitamin B12 transporter D AVL56_03365 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D AVL56_00610 ligand-gated channel protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D AVL56_16635 ligand-gated channel K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D AVL56_18420 ferric-rhodotorulic acid transporter K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D AVL56_01500 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D AVL56_00595 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_00720 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_01275 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_02235 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_02940 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_03245 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_03775 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_04180 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_04275 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_04550 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_05830 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_06080 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_07565 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_08085 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_08700 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_08725 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_09475 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_09490 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_09710 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_09780 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_09945 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_10725 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_10735 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_10955 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_11055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_11195 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_11235 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_11360 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_11490 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_12145 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_12455 ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_13005 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_13775 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_14235 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_14245 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_14345 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_14530 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_14665 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_14680 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_15710 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_15760 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_16495 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_16975 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_17475 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_18505 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_18515 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_18560 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_18740 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_18835 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_19100 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AVL56_15355 hypothetical protein K07796 cusC; outer membrane protein, copper/silver efflux system D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein D AVL56_10405 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D AVL56_02825 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AVL56_07455 capsular biosynthesis protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D AVL56_14015 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D AVL56_15875 porin K07267 oprB; porin D AVL56_04880 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AVL56_13655 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D AVL56_05850 outer membrane assembly protein BamC K07287 bamC; outer membrane protein assembly factor BamC D AVL56_13155 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD D AVL56_08120 cell envelope protein SmpA K06186 bamE; outer membrane protein assembly factor BamE D AVL56_19585 hypothetical protein K07278 tamA; translocation and assembly module TamA D AVL56_19590 hypothetical protein K09800 tamB; translocation and assembly module TamB D AVL56_04600 hypothetical protein K21449 ata; trimeric autotransporter adhesin D AVL56_03865 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D AVL56_03870 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D AVL56_03685 LPS biosynthesis protein K04744 lptD; LPS-assembly protein D AVL56_06435 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D AVL56_16780 hypothetical protein K20543 bcsC; cellulose synthase operon protein C D AVL56_07460 hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM D AVL56_07975 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D AVL56_04450 murein hydrolase transporter LrgA K06518 cidA; holin-like protein D AVL56_10690 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D AVL56_18480 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D AVL56_02710 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D AVL56_15345 cation transporter K07787 cusA; copper/silver efflux system protein D AVL56_15145 transporter K18299 mexF; multidrug efflux pump D AVL56_00970 multidrug transporter K18138 acrB; multidrug efflux pump D AVL56_03435 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_06200 acriflavin resistance protein K18138 acrB; multidrug efflux pump D AVL56_09120 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_18335 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AVL56_15695 emrE protein K03297 emrE; small multidrug resistance pump D AVL56_00950 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D AVL56_14875 acetylserine transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D AVL56_01050 chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD D AVL56_12400 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AVL56_00460 lactate permease K03303 lutP; lactate permease D AVL56_00550 BCCT transporter K05020 opuD; glycine betaine transporter D AVL56_10960 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AVL56_03885 calcium:proton antiporter K07301 yrbG; cation:H+ antiporter D AVL56_08425 calcium:proton antiporter K07301 yrbG; cation:H+ antiporter D AVL56_17045 cation acetate symporter K14393 actP; cation/acetate symporter D AVL56_19485 glutamate permease K03312 gltS; glutamate:Na+ symporter, ESS family D AVL56_02335 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D AVL56_12765 Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D AVL56_00435 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D AVL56_05120 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D AVL56_14845 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D AVL56_03975 K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D AVL56_16470 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D AVL56_04930 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D AVL56_00080 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D AVL56_00085 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D AVL56_16870 hypothetical protein K10974 codB; cytosine permease D AVL56_07560 xanthine permease XanP K16345 xanP; xanthine permease XanP D AVL56_19095 xanthine permease XanP K16345 xanP; xanthine permease XanP D AVL56_07600 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D AVL56_03520 benzoate transporter K05782 benE; benzoate membrane transport protein D AVL56_15940 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family D AVL56_03300 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D AVL56_09950 Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family D AVL56_15960 manganese transporter K03322 mntH; manganese transport protein D AVL56_12100 C4-dicarboxylate ABC transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D AVL56_12105 C4-dicarboxylate ABC transporter permease K11689 dctQ; TRAP-type transport system small permease protein D AVL56_12110 hypothetical protein K11690 dctM; TRAP-type transport system large permease protein D AVL56_15585 arsenic transporter K03325 ACR3; arsenite transporter D AVL56_13475 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AVL56_06750 transporter K13936 mdcF; malonate transporter and related proteins D AVL56_00945 lysine transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D AVL56_05395 lysine transporter LysE K05835 rhtC; threonine efflux protein D AVL56_05870 permease K03548 perM; putative permease D AVL56_11655 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D AVL56_15290 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D AVL56_12975 FTR1 family iron permease K07243 FTR; high-affinity iron transporter D AVL56_17905 carbon starvation protein CstA K06200 cstA; carbon starvation protein D AVL56_03590 protein TonB K03832 tonB; periplasmic protein TonB D AVL56_09730 energy transducer TonB K03832 tonB; periplasmic protein TonB D AVL56_10915 hypothetical protein K03832 tonB; periplasmic protein TonB D AVL56_08925 flagellar motor protein MotB K03640 pal; peptidoglycan-associated lipoprotein D AVL56_08935 protein TolA K03646 tolA; colicin import membrane protein D AVL56_08930 translocation protein TolB K03641 tolB; TolB protein D AVL56_09880 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D AVL56_09885 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D AVL56_09890 oxaloacetate decarboxylase K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D AVL56_15350 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AVL56_10395 secretion protein HylD K12542 lapC; membrane fusion protein, adhesin transport system D AVL56_17620 hypothetical protein K13408 cvaA; membrane fusion protein D AVL56_15150 efflux transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D AVL56_00965 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_06195 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_09115 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_18330 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_07450 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AVL56_14025 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D AVL56_14020 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator D AVL56_15025 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D AVL56_15665 hypothetical protein K28369 dolP; outer membrane lipoprotein DolP D AVL56_09700 transporter K03811 pnuC; nicotinamide mononucleotide transporter D AVL56_08445 PqiA protein K03808 pqiA; intermembrane transport protein PqiA/LetA D AVL56_08450 paraquat-inducible protein B K06192 pqiB; intermembrane transport protein PqiB/LetB D AVL56_08455 hypothetical protein K09857 pqiC; intermembrane transport lipoprotein PqiC D AVL56_11370 hypothetical protein K16348 ecnB; entericidin B D AVL56_04630 cytochrome C biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D AVL56_07640 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:aaw02044] D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein D AVL56_10400 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AVL56_10395 secretion protein HylD K12542 lapC; membrane fusion protein, adhesin transport system D AVL56_10405 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D AVL56_17620 hypothetical protein K13408 cvaA; membrane fusion protein D AVL56_17625 ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AVL56_04505 AAA family ATPase K02450 gspA; general secretion pathway protein A D AVL56_04510 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B D AVL56_19145 type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D AVL56_19150 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D AVL56_19155 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D AVL56_19160 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D AVL56_19165 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D AVL56_19170 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D AVL56_19175 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D AVL56_19180 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D AVL56_19185 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D AVL56_19190 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D AVL56_19195 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D AVL56_19200 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N D AVL56_15215 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AVL56_15205 methylation site containing protein K02650 pilA; type IV pilus assembly protein PilA D AVL56_15210 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D AVL56_13425 prepilin cleavage protein K02655 pilE; type IV pilus assembly protein PilE D AVL56_13680 ATP-dependent protease K02656 pilF; type IV pilus assembly protein PilF D AVL56_02030 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D AVL56_02025 pilus assembly protein CpaD K02663 pilN; type IV pilus assembly protein PilN D AVL56_02020 pilus assembly protein PilP K02664 pilO; type IV pilus assembly protein PilO D AVL56_02015 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D AVL56_02010 secretin K02666 pilQ; type IV pilus assembly protein PilQ D AVL56_15445 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D AVL56_15440 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU D AVL56_13445 pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV D AVL56_13440 pilin K02672 pilW; type IV pilus assembly protein PilW D AVL56_13435 pilus assembly protein PilZ K02673 pilX; type IV pilus assembly protein PilX D AVL56_13430 pilus assembly protein PilY K02674 pilY1; type IV pilus assembly protein PilY1 D AVL56_13395 pilus assembly protein K08084 fimT; type IV fimbrial biogenesis protein FimT D AVL56_13405 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D AVL56_01355 hypothetical protein K10924 mshA; MSHA pilin protein MshA D AVL56_01350 prepilin cleavage protein K10925 mshB; MSHA pilin protein MshB D AVL56_01360 hypothetical protein K10926 mshC; MSHA pilin protein MshC D AVL56_01365 hypothetical protein K10927 mshD; MSHA pilin protein MshD D AVL56_01335 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE D AVL56_01340 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG D AVL56_01300 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI D AVL56_01305 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI D AVL56_01310 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ D AVL56_01315 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK D AVL56_01320 MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D AVL56_01325 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM D AVL56_01330 hypothetical protein K12284 mshN; MSHA biogenesis protein MshN D AVL56_01370 hypothetical protein K12285 mshO; MSHA biogenesis protein MshO D AVL56_01375 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP D AVL56_15460 hypothetical protein K02221 yggT; YggT family protein D AVL56_04715 competence protein K02237 comEA; competence protein ComEA D AVL56_10860 hypothetical protein K02238 comEC; competence protein ComEC D AVL56_10045 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AVL56_10050 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AVL56_04595 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein D AVL56_10115 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AVL56_10105 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D AVL56_10100 fliI; EscN/YscN/HrcN family type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AVL56_10075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AVL56_10070 cell wall biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D AVL56_10065 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AVL56_10060 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AVL56_10055 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AVL56_03700 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AVL56_15245 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AVL56_02165 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AVL56_13785 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AVL56_03970 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AVL56_18005 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AVL56_13780 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AVL56_06385 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AVL56_17390 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AVL56_09155 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AVL56_17745 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D AVL56_13790 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AVL56_19885 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AVL56_02270 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D AVL56_02275 translocase K03117 tatB; sec-independent protein translocase protein TatB D AVL56_02280 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:aaw02042] D AVL56_09165 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AVL56_17895 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D AVL56_04125 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:aaw02022] D AVL56_03545 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AVL56_03540 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AVL56_08235 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AVL56_08230 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AVL56_19120 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AVL56_19115 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AVL56_02145 histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D AVL56_02140 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D AVL56_12050 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AVL56_12055 two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D AVL56_15785 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D AVL56_01445 two-component system response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D AVL56_01510 histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D AVL56_01515 two-component system response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR D AVL56_12295 ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AVL56_12985 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AVL56_12290 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AVL56_12990 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AVL56_15600 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AVL56_17835 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AVL56_01915 two-component system sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D AVL56_05465 sirA; two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D AVL56_15700 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D AVL56_15705 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR D AVL56_10535 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator D AVL56_15995 glnL; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AVL56_16000 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AVL56_09000 ATPase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AVL56_08990 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AVL56_16225 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AVL56_16520 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AVL56_01535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_10015 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_01530 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_09035 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_10025 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_01560 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_10010 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_03200 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D AVL56_10350 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_13865 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_03205 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D AVL56_10130 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AVL56_10125 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AVL56_18775 hybrid sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D AVL56_09020 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator C 02035 Bacterial motility proteins [BR:aaw02035] D AVL56_01535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_10015 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AVL56_01540 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_09995 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_10000 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AVL56_18285 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D AVL56_16515 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D AVL56_01555 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D AVL56_01550 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AVL56_10345 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AVL56_01560 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_10010 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AVL56_03200 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D AVL56_01530 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_09035 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_10025 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AVL56_10020 protein phosphatase K03414 cheZ; chemotaxis protein CheZ D AVL56_10350 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_13865 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AVL56_00995 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01525 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01545 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_01790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_02475 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_02815 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03330 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03450 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_03655 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_04215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_06140 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_09045 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_12355 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_13620 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_17530 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AVL56_18365 chemotaxis protein K03776 aer; aerotaxis receptor D AVL56_10105 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D AVL56_10100 fliI; EscN/YscN/HrcN family type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AVL56_10095 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D AVL56_10070 cell wall biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D AVL56_10065 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AVL56_10060 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AVL56_10055 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AVL56_10045 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AVL56_10050 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AVL56_10110 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AVL56_10080 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AVL56_10075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AVL56_10115 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AVL56_10305 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D AVL56_10355 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AVL56_02125 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D AVL56_10310 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D AVL56_00345 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AVL56_10085 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D AVL56_10120 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AVL56_10090 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AVL56_10340 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AVL56_10335 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AVL56_10330 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D AVL56_10320 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AVL56_10315 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AVL56_10300 glucosaminidase K02395 flgJ; peptidoglycan hydrolase FlgJ D AVL56_10325 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D AVL56_10295 flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AVL56_10290 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D AVL56_10365 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D AVL56_10370 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP D AVL56_17480 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX D AVL56_09455 hypothetical protein K21218 motY; sodium-type flagellar protein MotY D AVL56_10140 flagellin K02406 fliC; flagellin D AVL56_10270 flagellin K02406 fliC; flagellin D AVL56_10275 flagellin K02406 fliC; flagellin D AVL56_10280 flagellin K02406 fliC; flagellin D AVL56_10260 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D AVL56_10255 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AVL56_10030 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA D AVL56_13205 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D AVL56_13200 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AVL56_10135 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AVL56_10130 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AVL56_10125 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AVL56_10360 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AVL56_10265 flagellar biosynthesis protein FlaG K06603 flaG; flagellar protein FlaG D AVL56_10040 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D AVL56_10035 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D AVL56_15445 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D AVL56_15440 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU D AVL56_15205 methylation site containing protein K02650 pilA; type IV pilus assembly protein PilA D AVL56_15210 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D AVL56_15215 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AVL56_13680 ATP-dependent protease K02656 pilF; type IV pilus assembly protein PilF D AVL56_02010 secretin K02666 pilQ; type IV pilus assembly protein PilQ D AVL56_02015 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D AVL56_02020 pilus assembly protein PilP K02664 pilO; type IV pilus assembly protein PilO D AVL56_02025 pilus assembly protein CpaD K02663 pilN; type IV pilus assembly protein PilN D AVL56_02030 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D AVL56_13445 pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV D AVL56_13440 pilin K02672 pilW; type IV pilus assembly protein PilW D AVL56_13435 pilus assembly protein PilZ K02673 pilX; type IV pilus assembly protein PilX D AVL56_13430 pilus assembly protein PilY K02674 pilY1; type IV pilus assembly protein PilY1 D AVL56_13425 prepilin cleavage protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:aaw04812] D AVL56_01380 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AVL56_06690 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AVL56_15260 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AVL56_15265 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AVL56_15920 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D AVL56_15915 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D AVL56_15910 cell division topological specificity factor K03608 minE; cell division topological specificity factor D AVL56_10005 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AVL56_19845 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein D AVL56_19840 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:aaw04147] D AVL56_13020 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AVL56_04045 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AVL56_04555 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AVL56_11925 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_11960 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AVL56_04040 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AVL56_12000 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AVL56_03260 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AVL56_00490 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_14340 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_15340 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_09465 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D AVL56_12480 flotillin K07192 FLOT; flotillin D AVL56_18960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AVL56_08065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AVL56_15510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AVL56_16820 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D AVL56_13635 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AVL56_03505 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AVL56_03615 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_11765 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_12805 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D AVL56_17105 sodium:phosphate symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D AVL56_07150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AVL56_06825 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D AVL56_16165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AVL56_13015 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AVL56_13055 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AVL56_02095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AVL56_00790 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D AVL56_01130 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AVL56_01195 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D AVL56_11950 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AVL56_01280 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AVL56_15985 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AVL56_02300 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AVL56_07695 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AVL56_11355 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AVL56_13860 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1] D AVL56_15105 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AVL56_19060 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AVL56_15165 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AVL56_06105 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D AVL56_11990 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AVL56_10505 calcium sensor EFh K02183 CALM; calmodulin D AVL56_06390 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AVL56_01685 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AVL56_18050 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:aaw02048] D AVL56_01990 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AVL56_04345 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AVL56_00450 hypothetical protein K07448 mrr; restriction system protein D AVL56_02535 addiction module protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D AVL56_02540 prevent-host-death protein K19159 yefM; antitoxin YefM D AVL56_09835 phage shock protein C K03973 pspC; phage shock protein C D AVL56_09840 phage shock protein B K03970 pspB; phage shock protein B D AVL56_15260 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AVL56_01380 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AVL56_06690 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AVL56_01920 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AVL56_03195 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AVL56_08305 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AVL56_13370 hypothetical protein K09159 cptB; antitoxin CptB D AVL56_13730 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins [BR:aaw04031] C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:aaw04090] D AVL56_16820 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D AVL56_06825 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:aaw01504] D AVL56_14495 energy transducer TonB K02172 blaR1; bla regulator protein blaR1 D AVL56_14490 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D AVL56_08235 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D AVL56_08230 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D AVL56_00965 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_06195 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_09115 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_18330 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AVL56_00970 multidrug transporter K18138 acrB; multidrug efflux pump D AVL56_03435 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_06200 acriflavin resistance protein K18138 acrB; multidrug efflux pump D AVL56_09120 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AVL56_18335 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D AVL56_02825 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AVL56_15150 efflux transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D AVL56_15145 transporter K18299 mexF; multidrug efflux pump D AVL56_01895 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D AVL56_05705 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AVL56_03170 tolC; outer membrane channel protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aaw00537] D AVL56_13860 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1] D AVL56_00490 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_14340 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AVL56_15340 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:aaw03100] D AVL56_08300 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AVL56_13110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AVL56_16555 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AVL56_00380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_04965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_09900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_09905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_13575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AVL56_09350 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AVL56_09355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AVL56_07035 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_07040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_07045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_07050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AVL56_05445 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AVL56_07870 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AVL56_07925 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AVL56_07930 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AVL56_08295 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AVL56_02225 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_02230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_05450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_17145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AVL56_13570 tRNA-His K14226 tRNA-His; tRNA His D AVL56_13105 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AVL56_16550 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AVL56_05440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_06380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_07920 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_13565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_16135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AVL56_08905 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AVL56_08910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AVL56_08915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AVL56_04425 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_07915 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_11345 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_11350 tRNA-Met K14230 tRNA-Met; tRNA Met D AVL56_01485 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AVL56_12410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AVL56_13560 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AVL56_13580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AVL56_05485 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_05495 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_05535 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_08895 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_09910 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AVL56_02350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AVL56_17140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AVL56_17155 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AVL56_09690 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AVL56_18010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AVL56_17150 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AVL56_07680 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08310 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08315 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_08320 tRNA-Val K14237 tRNA-Val; tRNA Val D AVL56_00155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_01660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_13115 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_16560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_17195 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AVL56_00165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_01670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_13100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_16545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_17185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AVL56_00170 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_01675 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_13095 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_16540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_17180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AVL56_03980 rnpB; RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component D AVL56_10990 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA D AVL56_15075 ssrS; 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA D AVL56_09800 ffs; signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AVL56_08150 dkgB; 2,5-diketo-D-gluconic acid reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D AVL56_14945 dkgB; 2,5-diketo-D-gluconic acid reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D AVL56_01680 alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-] D AVL56_01635 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11] D AVL56_02365 glucose dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AVL56_03625 dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AVL56_14865 glucose dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AVL56_12690 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D AVL56_15475 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D AVL56_17870 pyrroloquinoline quinone biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D AVL56_06760 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D AVL56_06765 twin-arginine translocation pathway signal protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D AVL56_00730 NADH-ubiquinone oxidoreductase subunit 6 K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D AVL56_06115 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D AVL56_08510 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AVL56_11470 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AVL56_06030 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AVL56_11240 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D AVL56_12260 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AVL56_16745 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AVL56_11935 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D AVL56_02045 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AVL56_18155 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AVL56_10795 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D AVL56_06240 mononuclear molybdenum enzyme YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D AVL56_16305 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D AVL56_05865 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AVL56_05410 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AVL56_11245 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D AVL56_04195 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AVL56_12265 osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AVL56_01875 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D AVL56_05470 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AVL56_17850 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D AVL56_02740 superoxide dismutase K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1] D AVL56_05885 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AVL56_08135 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AVL56_15575 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D AVL56_02780 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AVL56_13195 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AVL56_08145 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D AVL56_15395 3-oxoacyl-ACP synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D AVL56_07980 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AVL56_06305 acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D AVL56_06550 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D AVL56_07780 transglutaminase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D AVL56_06555 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D AVL56_05415 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D AVL56_19775 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D AVL56_02885 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AVL56_16910 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D AVL56_06775 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D AVL56_14055 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AVL56_00395 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D AVL56_01025 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D AVL56_15595 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D AVL56_14660 acyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D AVL56_08715 hypothetical protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D AVL56_01150 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AVL56_08950 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AVL56_12655 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AVL56_19620 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AVL56_07445 histidinol-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D AVL56_08180 S-adenosylmethionine tRNA ribosyltransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D AVL56_09175 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D AVL56_03605 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AVL56_11335 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AVL56_04515 metal-dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AVL56_19765 metal-dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AVL56_02290 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AVL56_06845 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AVL56_13305 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AVL56_06125 esterase K01175 ybfF; esterase [EC:3.1.-.-] D AVL56_16785 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D AVL56_11045 beta-agarase K01219 E3.2.1.81; beta-agarase [EC:3.2.1.81] D AVL56_10695 alpha-amlyase K21575 susA; neopullulanase [EC:3.2.1.135] D AVL56_15765 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D AVL56_12150 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D AVL56_18470 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D AVL56_05530 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D AVL56_00100 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AVL56_10660 penicillin acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D AVL56_01410 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D AVL56_12320 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D AVL56_02855 hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D AVL56_06910 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D AVL56_07770 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AVL56_09205 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AVL56_18250 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D AVL56_12520 heparinase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D AVL56_01125 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D AVL56_03635 ATP-dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D AVL56_09375 electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D AVL56_09370 electron transporter RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D AVL56_09365 electron transporter RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D AVL56_16940 NADH:ubiquinone reductase (Na(+)-transporting) subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D AVL56_16935 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D AVL56_16930 NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D AVL56_16925 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D AVL56_16920 NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D AVL56_16915 NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D AVL56_05300 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D AVL56_17775 transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A D AVL56_08500 signal transduction protein K04767 acuB; acetoin utilization protein AcuB D AVL56_01640 Twin-arginine translocation pathway signal K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit C 99982 Energy metabolism D AVL56_14175 ferredoxin K05524 fdxA; ferredoxin D AVL56_05670 FeS-binding protein K11107 yfaE; ferredoxin D AVL56_09380 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D AVL56_09385 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D AVL56_09360 electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D AVL56_19870 nitric oxide synthase K06205 mioC; MioC protein D AVL56_16760 flavodoxin FldB K03840 fldB; flavodoxin II D AVL56_06135 flavodoxin FldA K03839 fldA; flavodoxin I D AVL56_06110 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D AVL56_14330 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D AVL56_10885 sulfate transporter CysZ K06203 cysZ; CysZ protein D AVL56_18060 hypothetical protein K08234 yaeR; glyoxylase I family protein D AVL56_15450 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D AVL56_05615 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D AVL56_05610 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D AVL56_18115 hypothetical protein K07270 K07270; glycosyl transferase, family 25 D AVL56_16790 cellulose synthase BcsB subunit K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D AVL56_00795 heme biosynthesis protein K02498 hemY; HemY protein D AVL56_17555 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D AVL56_17560 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D AVL56_00360 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D AVL56_18205 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D AVL56_09645 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D AVL56_08770 DoxX family protein K15977 K15977; putative oxidoreductase D AVL56_00820 carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AVL56_06575 cold shock domain protein CspD K03704 cspA; cold shock protein D AVL56_09440 cold-shock protein K03704 cspA; cold shock protein D AVL56_17550 cold-shock protein K03704 cspA; cold shock protein D AVL56_18275 anti-sigma factor K07740 rsd; regulator of sigma D D AVL56_01860 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D AVL56_19310 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D AVL56_00635 multidrug ABC transporter ATP-binding protein K13926 rbbA; ribosome-dependent ATPase D AVL56_18125 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D AVL56_06570 clpS; ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D AVL56_13555 trigger factor K03545 tig; trigger factor D AVL56_06245 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D AVL56_10980 SsrA-binding protein K03664 smpB; SsrA-binding protein D AVL56_19560 ATP-dependent protease K07391 comM; magnesium chelatase family protein D AVL56_09755 proline hydroxylase K07394 K07394; SM-20-related protein D AVL56_11270 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D AVL56_08755 hypothetical protein K07396 K07396; putative protein-disulfide isomerase D AVL56_09100 thioredoxin K07396 K07396; putative protein-disulfide isomerase D AVL56_06190 hypothetical protein K07397 yhfA; putative redox protein D AVL56_19340 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D AVL56_07630 xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D AVL56_11495 xanthine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D AVL56_19770 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D AVL56_00240 hypothetical protein K03630 radC; DNA repair protein RadC D AVL56_04420 DNA repair protein RadC K03630 radC; DNA repair protein RadC D AVL56_05040 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D AVL56_15655 RNA polymerase subunit sigma-54 K07460 yraN; putative endonuclease D AVL56_14045 endonuclease K07461 K07461; putative endonuclease D AVL56_00110 DNA processing protein DprA K04096 smf; DNA processing protein D AVL56_05580 recombination factor protein RarA K07478 ycaJ; putative ATPase D AVL56_00120 hypothetical protein K07479 yrdD; putative DNA topoisomerase D AVL56_14965 transposase K07491 rayT; REP-associated tyrosine transposase D AVL56_11015 hypothetical protein K14059 int; integrase C 99979 Viral proteins C 99998 Others D AVL56_09845 phage shock protein A K03969 pspA; phage shock protein A D AVL56_16660 phage shock protein A K03969 pspA; phage shock protein A D AVL56_13045 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC D AVL56_05200 deoxyribodipyrimidine photolyase K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AVL56_18385 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AVL56_19745 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AVL56_06205 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D AVL56_04665 amino acid transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D AVL56_04090 inorganic phosphate transporter PiT family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D AVL56_01200 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AVL56_01260 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AVL56_06345 proline:sodium symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D AVL56_09255 proline:sodium symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D AVL56_12225 transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AVL56_18475 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AVL56_05115 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D AVL56_16730 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D AVL56_07935 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D AVL56_11915 alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D AVL56_13500 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D AVL56_00785 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D AVL56_17005 transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D AVL56_09515 SpoVR family protein K06415 spoVR; stage V sporulation protein R D AVL56_02180 peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility D AVL56_04750 protein syd K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D AVL56_15185 hypothetical protein K03807 ampE; AmpE protein D AVL56_05105 RNA chaperone ProQ K03607 proQ; ProP effector D AVL56_05240 universal stress protein UspA K06149 uspA; universal stress protein A D AVL56_04095 universal stress protein UspA K14055 uspE; universal stress protein E D AVL56_05320 universal stress protein UspE K14055 uspE; universal stress protein E D AVL56_15980 GTP-binding protein TypA K06207 typA; GTP-binding protein D AVL56_13160 anti-sigma factor K07167 chrR; putative transcriptional regulator D AVL56_07965 nucleoside triphosphate hydrolase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AVL56_02935 ATPase K07175 phoH2; PhoH-like ATPase D AVL56_09505 serine protein kinase PrkA K07180 prkA; serine protein kinase D AVL56_17040 signal transduction protein K07182 K07182; CBS domain-containing protein D AVL56_02850 hypothetical protein K07184 ygiM; SH3 domain protein D AVL56_13300 hypothetical protein K07186 smp; membrane protein D AVL56_19880 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D AVL56_05585 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D AVL56_07860 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D AVL56_04650 surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D AVL56_04885 hypothetical protein K06142 hlpA; outer membrane protein D AVL56_02770 peptidase K06194 nlpD; lipoprotein NlpD D AVL56_10895 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D AVL56_00135 hypothetical protein K07275 ompW; outer membrane protein D AVL56_15110 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D AVL56_15115 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D AVL56_12815 starvation-inducible protein K07285 slp; outer membrane lipoprotein D AVL56_12370 hypothetical protein K07340 ybbJ; inner membrane protein D AVL56_00630 hemolysin D K01993 ABC-2.TX; HlyD family secretion protein D AVL56_09570 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D AVL56_08240 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA D AVL56_04625 cytochrome c biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D AVL56_04640 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AVL56_13675 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D AVL56_04085 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D AVL56_09470 bacterioferritin K02192 bfd; bacterioferritin-associated ferredoxin D AVL56_19245 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein D AVL56_03665 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein B B 09194 Poorly characterized C 99996 General function prediction only D AVL56_12555 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production D AVL56_05340 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K03796 bax; Bax protein D AVL56_06945 GCN5 family acetyltransferase K02348 elaA; ElaA protein D AVL56_12025 transporter K04065 osmY; hyperosmotically inducible periplasmic protein D AVL56_17865 pyrroloquinoline quinone biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D AVL56_17875 coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D AVL56_03815 tRNA-binding protein K06878 K06878; tRNA-binding protein D AVL56_15490 tRNA-binding protein K06878 K06878; tRNA-binding protein D AVL56_00140 hemoglobin-like oxygen-binding protein K06886 glbN; hemoglobin D AVL56_00920 globin K06886 glbN; hemoglobin D AVL56_05330 patatin K07001 K07001; NTE family protein D AVL56_13885 phospholipase K07001 K07001; NTE family protein D AVL56_15900 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D AVL56_13725 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D AVL56_13715 cysteine desulfurase K09015 sufD; Fe-S cluster assembly protein SufD D AVL56_14715 hypothetical protein K07058 K07058; membrane protein D AVL56_17690 hypothetical protein K07058 K07058; membrane protein D AVL56_18970 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D AVL56_07240 segregation protein B K02426 sufE; cysteine desulfuration protein SufE D AVL56_13695 Fe-S cluster assembly protein SufE K02426 sufE; cysteine desulfuration protein SufE D AVL56_10510 hypothetical protein K07146 K07146; UPF0176 protein D AVL56_06595 lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D AVL56_15580 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D AVL56_19285 SlyX protein K03745 slyX; SlyX protein D AVL56_00115 hypothetical protein K03747 smg; Smg protein D AVL56_12305 hypothetical protein K05805 creA; CreA protein D AVL56_06530 hypothetical protein K02742 sprT; SprT protein D AVL56_12560 dedD protein K03749 dedD; DedD protein D AVL56_01995 hypothetical protein K03112 damX; DamX protein D AVL56_15775 hypothetical protein K08981 K08981; putative membrane protein D AVL56_13830 hypothetical protein K08989 K08989; putative membrane protein D AVL56_00675 hypothetical protein K08990 ycjF; putative membrane protein D AVL56_06260 zinc chelation protein SecC K09858 K09858; SEC-C motif domain protein D AVL56_18045 PhnA domain protein K06193 phnA; protein PhnA C 99997 Function unknown D AVL56_17120 hypothetical protein K06867 K06867; uncharacterized protein D AVL56_01175 hypothetical protein K06889 K06889; uncharacterized protein D AVL56_11665 hypothetical protein K06889 K06889; uncharacterized protein D AVL56_12240 hypothetical protein K06889 K06889; uncharacterized protein D AVL56_08740 ketosteroid isomerase K06893 K06893; uncharacterized protein D AVL56_00670 hypothetical protein K06918 K06918; uncharacterized protein D AVL56_15125 Fe-S protein EB3 K06938 K06938; uncharacterized protein D AVL56_18105 metallophosphoesterase K06953 K06953; uncharacterized protein D AVL56_13185 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D AVL56_11555 peptidase M14 K06987 K06987; uncharacterized protein D AVL56_17070 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D AVL56_18580 hypothetical protein K06987 K06987; uncharacterized protein D AVL56_02400 glyoxalase K06991 K06991; uncharacterized protein D AVL56_07700 glyoxalase K06996 K06996; uncharacterized protein D AVL56_08540 glyoxalase K06996 K06996; uncharacterized protein D AVL56_12750 lactoylglutathione lyase K06996 K06996; uncharacterized protein D AVL56_03190 esterase YqiA K07000 K07000; uncharacterized protein D AVL56_05150 RND transporter K07003 K07003; uncharacterized protein D AVL56_14090 RND transporter K07003 K07003; uncharacterized protein D AVL56_18635 RND transporter K07003 K07003; uncharacterized protein D AVL56_11260 nuclease K07004 K07004; uncharacterized protein D AVL56_12180 ribonuclease K07004 K07004; uncharacterized protein D AVL56_06970 hypothetical protein K07006 K07006; uncharacterized protein D AVL56_10580 hydrolase K07014 K07014; uncharacterized protein D AVL56_19260 alpha/beta hydrolase K07019 K07019; uncharacterized protein D AVL56_07815 alpha/beta hydrolase K07020 K07020; uncharacterized protein D AVL56_15955 hypothetical protein K07039 K07039; uncharacterized protein D AVL56_19275 DNA-binding protein K07070 K07070; uncharacterized protein D AVL56_08250 epimerase K07071 K07071; uncharacterized protein D AVL56_17900 permease K07089 K07089; uncharacterized protein D AVL56_02880 permease K07090 K07090; uncharacterized protein D AVL56_07535 hypothetical protein K07090 K07090; uncharacterized protein D AVL56_08840 hypothetical protein K07090 K07090; uncharacterized protein D AVL56_12840 permease K07090 K07090; uncharacterized protein D AVL56_18465 hypothetical protein K07090 K07090; uncharacterized protein D AVL56_07670 cell surface protein K07093 K07093; uncharacterized protein D AVL56_17130 phosphatase K07093 K07093; uncharacterized protein D AVL56_07270 hypoxanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein D AVL56_15650 hypothetical protein K07121 K07121; uncharacterized protein D AVL56_13010 glutathione S-transferase K07136 K07136; uncharacterized protein D AVL56_14180 hypothetical protein K07137 K07137; uncharacterized protein D AVL56_13170 peptidase S16 K07157 K07157; uncharacterized protein D AVL56_03645 hypothetical protein K09005 K09005; uncharacterized protein D AVL56_03465 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D AVL56_06480 hypothetical protein K09158 K09158; uncharacterized protein D AVL56_12780 hypothetical protein K09160 K09160; uncharacterized protein D AVL56_15780 hypothetical protein K09167 K09167; uncharacterized protein D AVL56_12075 hypothetical protein K09190 K09190; uncharacterized protein D AVL56_13190 hypothetical protein K09701 K09701; uncharacterized protein D AVL56_16865 hypothetical protein K09703 K09703; uncharacterized protein D AVL56_14415 purine nucleoside permease K09705 K09705; uncharacterized protein D AVL56_18785 purine nucleoside permease K09705 K09705; uncharacterized protein D AVL56_07705 amino acid-binding protein K09707 K09707; uncharacterized protein D AVL56_07140 hypothetical protein K09749 K09749; uncharacterized protein D AVL56_06055 hypothetical protein K09768 K09768; uncharacterized protein D AVL56_08215 hypothetical protein K09780 K09780; uncharacterized protein D AVL56_01840 hypothetical protein K09781 K09781; uncharacterized protein D AVL56_09510 hypothetical protein K09786 K09786; uncharacterized protein D AVL56_10845 hypothetical protein K09791 K09791; uncharacterized protein D AVL56_05310 cytochrome biogenesis protein K09792 K09792; uncharacterized protein D AVL56_12195 hypothetical protein K09794 K09794; uncharacterized protein D AVL56_15130 hypothetical protein K09797 K09797; uncharacterized protein D AVL56_02190 hypothetical protein K09798 K09798; uncharacterized protein D AVL56_10970 RnfH family protein K09801 K09801; uncharacterized protein D AVL56_05090 hypothetical protein K09807 K09807; uncharacterized protein D AVL56_16905 hypothetical protein K05952 K05952; uncharacterized protein D AVL56_06185 hypothetical protein K00243 K00243; uncharacterized protein D AVL56_15500 hypothetical protein K09861 K09861; uncharacterized protein D AVL56_15230 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D AVL56_17755 hypothetical protein K09891 K09891; uncharacterized protein D AVL56_00055 GTPase-activating protein K09894 K09894; uncharacterized protein D AVL56_15070 hypothetical protein K09895 K09895; uncharacterized protein D AVL56_02250 hypothetical protein K09897 K09897; uncharacterized protein D AVL56_11805 hypothetical protein K09897 K09897; uncharacterized protein D AVL56_19255 hypothetical protein K09898 K09898; uncharacterized protein D AVL56_06535 hypothetical protein K09899 K09899; uncharacterized protein D AVL56_12795 hypothetical protein K09902 K09902; uncharacterized protein D AVL56_10575 hypothetical protein K09904 K09904; uncharacterized protein D AVL56_06995 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein D AVL56_11780 hypothetical protein K09915 K09915; uncharacterized protein D AVL56_11905 hypothetical protein K09916 K09916; uncharacterized protein D AVL56_18360 hypothetical protein K09918 K09918; uncharacterized protein D AVL56_09930 hypothetical protein K09919 K09919; uncharacterized protein D AVL56_03180 cytoplasmic protein K09920 K09920; uncharacterized protein D AVL56_01080 hypothetical protein K09921 K09921; uncharacterized protein D AVL56_05295 hypothetical protein K09926 K09926; uncharacterized protein D AVL56_10865 flagellar biosynthesis protein FlhF K09928 K09928; uncharacterized protein D AVL56_13060 Clp protease ClpB K09929 K09929; uncharacterized protein D AVL56_13065 hypothetical protein K09930 K09930; uncharacterized protein D AVL56_02385 hypothetical protein K09937 K09937; uncharacterized protein D AVL56_05910 hypothetical protein K09938 K09938; uncharacterized protein D AVL56_17945 hypothetical protein K09939 K09939; uncharacterized protein D AVL56_06300 hypothetical protein K09940 K09940; uncharacterized protein D AVL56_13590 hypothetical protein K09941 K09941; uncharacterized protein D AVL56_06315 deoxycytidine triphosphate deaminase K09948 K09948; uncharacterized protein D AVL56_01140 hypothetical protein K09950 K09950; uncharacterized protein D AVL56_18805 hypothetical protein K09950 K09950; uncharacterized protein D AVL56_18815 hypothetical protein K09950 K09950; uncharacterized protein D AVL56_08345 hypothetical protein K09954 K09954; uncharacterized protein D AVL56_06960 hypothetical protein K09958 K09958; uncharacterized protein D AVL56_03285 hypothetical protein K09962 K09962; uncharacterized protein D AVL56_18030 hypothetical protein K09964 K09964; uncharacterized protein D AVL56_18180 hypothetical protein K09966 K09966; uncharacterized protein D AVL56_12080 urea carboxylase-associated protein K09967 K09967; uncharacterized protein D AVL56_12855 polysaccharide biosynthesis protein GumN K09973 K09973; uncharacterized protein D AVL56_13810 cytoplasmic protein K09980 K09980; uncharacterized protein D AVL56_14880 urease K09984 K09984; uncharacterized protein D AVL56_19665 hypothetical protein K09986 K09986; uncharacterized protein D AVL56_05990 hypothetical protein K09989 K09989; uncharacterized protein D AVL56_03120 trehalose utilization K09992 K09992; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2026