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Transfer RNA Biogenesis - Acinetobacter baumannii BJAB0715
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D BJAB0715_02668 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D BJAB0715_03376 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D BJAB0715_02747 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
D BJAB0715_02669 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D BJAB0715_03238 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D BJAB0715_03563 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BJAB0715_03218 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BJAB0715_00059 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BJAB0715_00560 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BJAB0715_00771 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BJAB0715_02416 Glutamyl- and glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BJAB0715_00185 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BJAB0715_01111 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BJAB0715_03294 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D BJAB0715_01335 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BJAB0715_00634 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BJAB0715_03105 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BJAB0715_01405 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BJAB0715_03122 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BJAB0715_00543 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BJAB0715_00644 Phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BJAB0715_00645 Phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BJAB0715_00003 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BJAB0715_03077 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D BJAB0715_03771 D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
D BJAB0715_01892 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
D BJAB0715_01357 putative S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D BJAB0715_02694 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D BJAB0715_00462 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BJAB0715_03514 Pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D BJAB0715_01841 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D BJAB0715_00210 Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BJAB0715_02423 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BJAB0715_00021 putative GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BJAB0715_02566 NAD/FAD-utilizing enzyme apparently involved in cell division K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
D BJAB0715_01825 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
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AProkaryotic type
B 5'processing factors
C Ribonucrease P
D BJAB0715_00018 RNase P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D BJAB0715_02668 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D BJAB0715_01248 DNA polymerase III, epsilon subunit-related 3'-5' exonuclease K03683 rnt; ribonuclease T [EC:3.1.13.-]
D BJAB0715_00080 RNase PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D BJAB0715_01904 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D BJAB0715_03376 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D BJAB0715_02747 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D BJAB0715_02669 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D BJAB0715_03238 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
D BJAB0715_03577 ATPase component of ABC transporter with duplicated ATPase domains K06020 ettA; energy-dependent translational throttle protein EttA
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D BJAB0715_00560 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BJAB0715_03218 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D BJAB0715_00003 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BJAB0715_03077 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BJAB0715_00634 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BJAB0715_00059 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BJAB0715_01111 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BJAB0715_01335 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BJAB0715_03122 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BJAB0715_00771 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BJAB0715_03105 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BJAB0715_03294 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BJAB0715_03473 Glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BJAB0715_03474 Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BJAB0715_01405 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BJAB0715_03563 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BJAB0715_02416 Glutamyl- and glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BJAB0715_00185 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BJAB0715_00644 Phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BJAB0715_00645 Phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BJAB0715_00543 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BJAB0715_00295 Glutamyl- and glutaminyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
C Trans-editing factors
D BJAB0715_03771 D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D BJAB0715_01854 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
D BJAB0715_01800 Cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D BJAB0715_00606 tRNA-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D BJAB0715_02899 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D BJAB0715_00783 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
C Methylthiotransferases
D BJAB0715_03378 2-methylthioadenine synthetase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
C Methyltransferases
D BJAB0715_01595 SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D BJAB0715_01756 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D BJAB0715_01357 putative S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D BJAB0715_03518 tRNA-(guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BJAB0715_00021 putative GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BJAB0715_01684 rRNA methylase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D BJAB0715_03103 putative rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D BJAB0715_02694 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D BJAB0715_02969 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D BJAB0715_00462 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BJAB0715_03514 Pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BJAB0715_02426 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BJAB0715_02850 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BJAB0715_00138 Pseudouridylate synthase, 23S RNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
C Thiolation factors
D BJAB0715_02826 putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BJAB0715_03031 putative ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D BJAB0715_00413 putative redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D BJAB0715_02264 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D BJAB0715_02267 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D BJAB0715_01839 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D BJAB0715_01841 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BJAB0715_03223 putative aminomethyltransferase related to GcvT K06980 ygfZ; tRNA-modifying protein YgfZ
C KEOPS/EKC complex
C Other tRNA modification factors
D BJAB0715_02566 NAD/FAD-utilizing enzyme apparently involved in cell division K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BJAB0715_02423 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BJAB0715_02920 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D BJAB0715_03326 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D BJAB0715_03310 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BJAB0715_02946 putative PP-loop superfamily ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BJAB0715_01797 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BJAB0715_02945 Organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BJAB0715_02717 Enzyme related to GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D BJAB0715_01738 putative Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D BJAB0715_01503 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D BJAB0715_03314 Queuine/archaeosine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BJAB0715_00653 putative ATPase of the PP-loop superfamily implicated in cell cycle control K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BJAB0715_00689 Inactive-like protein of metal-dependent protease, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BJAB0715_00210 Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BJAB0715_02641 Metal-dependent proteases with possible chaperone activity K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BJAB0715_02425 putative ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BJAB0715_00602 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
C BJAB0715_03395 Exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C BJAB0715_00399 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024