+E Ribosome biogenesis KO
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Ribosome Biogenesis - Acinetobacter bereziniae
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D BSR55_15045 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D BSR55_02720 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C BSR55_15040 GTPase Era K03595 era; GTPase
C BSR55_07090 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C BSR55_01290 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
C BSR55_19475 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
C BSR55_20725 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
C BSR55_19875 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D BSR55_09280 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D BSR55_21090 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BSR55_15435 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BSR55_00640 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BSR55_14885 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BSR55_09365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BSR55_01590 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BSR55_06365 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BSR55_17340 rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D BSR55_01620 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D BSR55_19540 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BSR55_15610 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BSR55_15370 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BSR55_18470 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D BSR55_08735 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))-methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D BSR55_02870 23S rRNA (adenine(2503)-C(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BSR55_02955 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BSR55_07575 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BSR55_09295 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BSR55_18355 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BSR55_18985 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BSR55_05150 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BSR55_14805 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
B ribosomal protein modification factors
C BSR55_17110 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C BSR55_19315 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
C BSR55_11920 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C BSR55_10935 protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
C BSR55_12975 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C BSR55_11090 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
C BSR55_09740 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
B rRNA processing factors
C BSR55_15045 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C BSR55_18990 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
C BSR55_15915 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
C BSR55_19560 Holliday junction DNA helicase RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C BSR55_15040 GTPase Era K03595 era; GTPase
C BSR55_02715 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C BSR55_02905 ribosome biogenesis GTPase Der K03977 engA; GTPase
C BSR55_07090 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C BSR55_00910 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C BSR55_09645 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BSR55_19410 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BSR55_19465 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C BSR55_19480 ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
C BSR55_02920 ribosome silencing factor K09710 ybeB; ribosome-associated protein
C BSR55_18515 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
C BSR55_15615 RNA-binding protein K07574 yhbY; RNA-binding protein
C BSR55_03020 hypothetical protein K09889 yjgA; ribosome-associated protein
C BSR55_17435 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
C BSR55_09155 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C BSR55_17990 metal-binding protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024