+D #

  Transfer RNA Biogenesis - Alcanivorax borkumensis

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors C CCA adding factors D ABO_2052 cca; tRNA cytidylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D ABO_1509 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABO_0739 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ABO_0459 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ABO_1947 leuS; leucine-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ABO_1599 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ABO_1207 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ABO_2242 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ABO_1648 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ABO_0749 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D ABO_1798 alarS; (alanyl-tRNA synthetase) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ABO_2133 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ABO_1294 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ABO_2135 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ABO_0492 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ABO_1859 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ABO_1838 pheS; Phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ABO_1837 pheT; Phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ABO_0366 tyrS; tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ABO_1390 trpS; Tryptophanyl-tRNA synthetase, putative K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D ABO_2256 dtD; D-tyrosyl-tRNA(Tyr)-deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D ABO_1764 hit-1; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ABO_2114 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D ABO_2573 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] C Psudouridine synthases D ABO_1463 truA; Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ABO_0331 truB; pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ABO_1168 conserved hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D ABO_1872 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D ABO_0134 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ABO_2204 miaA; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ABO_2752 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ABO_2737 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ABO_1725 conserved hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D ABO_0280 cysQ; inositol 1-phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D ABO_2754 rnpA; ribonuclease P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D ABO_0724 rnt; Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D ABO_0206 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D ABO_1768 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] C CCA adding factors D ABO_2052 cca; tRNA cytidylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors D ABO_1199 conserved hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] B tRNA transport factors C tRNA export factors D ABO_2177 ABC transporter, ATP-binding protein, putative K06020 ettA; energy-dependent translational throttle protein EttA B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D ABO_1947 leuS; leucine-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ABO_0739 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D ABO_0366 tyrS; tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ABO_1390 trpS; Tryptophanyl-tRNA synthetase, putative K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ABO_2133 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ABO_0459 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ABO_1648 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ABO_1798 alarS; (alanyl-tRNA synthetase) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ABO_0492 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ABO_1599 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ABO_1294 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ABO_0749 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ABO_0009 glyQ; glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ABO_0008 glyS; glycyl-tRNA synthetase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ABO_2135 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ABO_1509 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABO_1207 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ABO_2242 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ABO_1838 pheS; Phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ABO_1837 pheT; Phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ABO_1859 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ABO_0344 gltX; glutamyl-tRNA synthetase-related protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] C Trans-editing factors D ABO_2256 dtD; D-tyrosyl-tRNA(Tyr)-deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D ABO_0353 ybaK; protein ybaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D ABO_2620 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases D ABO_0821 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D ABO_1513 yjbN; TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D ABO_2013 TIM-barrel protein, putative, NifR3 family, putative K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D ABO_2162 Dihydrouridine synthase protein family, putative K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] C Methylthiotransferases D ABO_1934 conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D ABO_0973 methyltransferase, putative K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D ABO_0974 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D ABO_1728 lasT; RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D ABO_2573 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ABO_0800 trmD; tRNA (Guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D ABO_2752 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ABO_0813 spoU; RNA methyltransferase, TrmH family, group 3 K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D ABO_0513 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D ABO_2271 trmH; RNA methyltransferase, TrmH family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D ABO_1734 conserved hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] C Psudouridine synthases D ABO_1463 truA; Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ABO_0331 truB; pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ABO_1168 conserved hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D ABO_1194 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] C Thiolation factors D ABO_1275 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ABO_2264 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ABO_1266 ydaO; conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D ABO_1560 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABO_2263 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABO_0772 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABO_1299 DsrE/DsrF-like family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D ABO_1872 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ABO_1644 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D ABO_2737 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ABO_2204 miaA; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ABO_1203 miaE; tRNA-(ms(2)io(6)a)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D ABO_0970 D-amino acid oxidase family protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D ABO_0500 queA; S-adenosylmethionine:tRNAribosyltransferase-isom e rase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D ABO_0762 exsB protein, putative K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D ABO_0761 radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D ABO_0880 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D ABO_2209 iron-sulfur cluster-binding protein, putative K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D ABO_1725 conserved hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3] D ABO_1720 conserved hypothetical protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D ABO_0501 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D ABO_1160 mesJ; cell cycle protein MesJ, putative K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D ABO_1128 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D ABO_0134 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ABO_2059 gcp; Glycoprotease family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D ABO_2207 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE B tRNA degradation factors C ABO_2193 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C ABO_0333 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024