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Transcription Machinery - Agaricus bisporus var. bisporus H97
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E AGABI2DRAFT215454 AGABI2DRAFT_215454; hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E AGABI2DRAFT113824 AGABI2DRAFT_113824; hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E AGABI2DRAFT192637 AGABI2DRAFT_192637; hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E AGABI2DRAFT194279 AGABI2DRAFT_194279; hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E AGABI2DRAFT193120 AGABI2DRAFT_193120; hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E AGABI2DRAFT194810 AGABI2DRAFT_194810; hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E AGABI2DRAFT191302 AGABI2DRAFT_191302; hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E AGABI2DRAFT61363 AGABI2DRAFT_61363; hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E AGABI2DRAFT197624 AGABI2DRAFT_197624; hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E AGABI2DRAFT191935 AGABI2DRAFT_191935; hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E AGABI2DRAFT138476 AGABI2DRAFT_138476; hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E AGABI2DRAFT192339 AGABI2DRAFT_192339; hypothetical protein K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E AGABI2DRAFT194488 AGABI2DRAFT_194488; hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E AGABI2DRAFT195784 AGABI2DRAFT_195784; hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E AGABI2DRAFT44722 AGABI2DRAFT_44722; hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E AGABI2DRAFT182039 AGABI2DRAFT_182039; hypothetical protein K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
E AGABI2DRAFT189364 AGABI2DRAFT_189364; hypothetical protein K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
E AGABI2DRAFT182197 AGABI2DRAFT_182197; hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E AGABI2DRAFT189919 AGABI2DRAFT_189919; hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E AGABI2DRAFT152253 AGABI2DRAFT_152253; hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6
E AGABI2DRAFT150150 AGABI2DRAFT_150150; hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E AGABI2DRAFT178999 AGABI2DRAFT_178999; hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E AGABI2DRAFT78956 AGABI2DRAFT_78956; hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11
E AGABI2DRAFT78470 AGABI2DRAFT_78470; hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E AGABI2DRAFT216321 AGABI2DRAFT_216321; hypothetical protein K03127 TAF13; transcription initiation factor TFIID subunit 13
E AGABI2DRAFT182212 AGABI2DRAFT_182212; hypothetical protein K14651 TAF15; transcription initiation factor TFIID subunit 15
D TFIIE
E AGABI2DRAFT208287 AGABI2DRAFT_208287; hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E AGABI2DRAFT227224 AGABI2DRAFT_227224; hypothetical protein K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E AGABI2DRAFT219776 AGABI2DRAFT_219776; hypothetical protein K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E AGABI2DRAFT193303 AGABI2DRAFT_193303; hypothetical protein K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E AGABI2DRAFT178228 AGABI2DRAFT_178228; hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E AGABI2DRAFT204710 AGABI2DRAFT_204710; hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E AGABI2DRAFT204058 AGABI2DRAFT_204058; hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E AGABI2DRAFT191077 AGABI2DRAFT_191077; hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E AGABI2DRAFT218349 AGABI2DRAFT_218349; hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E AGABI2DRAFT183219 AGABI2DRAFT_183219; hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E AGABI2DRAFT138923 AGABI2DRAFT_138923; hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E AGABI2DRAFT223023 AGABI2DRAFT_223023; hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E AGABI2DRAFT183391 AGABI2DRAFT_183391; hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E AGABI2DRAFT140419 AGABI2DRAFT_140419; hypothetical protein K06634 CCNH; cyclin H
C Mediator complex
D Head
E AGABI2DRAFT198255 AGABI2DRAFT_198255; hypothetical protein K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E AGABI2DRAFT219391 AGABI2DRAFT_219391; hypothetical protein K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E AGABI2DRAFT66700 AGABI2DRAFT_66700; hypothetical protein K15139 MED22; mediator of RNA polymerase II transcription subunit 22
D Middle
E AGABI2DRAFT214397 AGABI2DRAFT_214397; hypothetical protein K15147 MED5; mediator of RNA polymerase II transcription subunit 5
E AGABI2DRAFT62440 AGABI2DRAFT_62440; hypothetical protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E AGABI2DRAFT67575 AGABI2DRAFT_67575; hypothetical protein K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E AGABI2DRAFT193554 AGABI2DRAFT_193554; hypothetical protein K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E AGABI2DRAFT192486 AGABI2DRAFT_192486; hypothetical protein K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E AGABI2DRAFT117836 AGABI2DRAFT_117836; hypothetical protein K15156 MED14; mediator of RNA polymerase II transcription subunit 14
D CDK-module
E AGABI2DRAFT212134 AGABI2DRAFT_212134; hypothetical protein K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E AGABI2DRAFT220473 AGABI2DRAFT_220473; hypothetical protein K15161 CCNC; cyclin-C
E AGABI2DRAFT204238 AGABI2DRAFT_204238; hypothetical protein K15163 SRB8; mediator of RNA polymerase II transcription subunit 12, fungi type
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
E AGABI2DRAFT70461 AGABI2DRAFT_70461; hypothetical protein K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E AGABI2DRAFT184795 AGABI2DRAFT_184795; hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E AGABI2DRAFT181200 AGABI2DRAFT_181200; hypothetical protein K11313 SUPT3H; transcription initiation protein SPT3
E AGABI2DRAFT117524 AGABI2DRAFT_117524; hypothetical protein K11359 SPT7; transcriptional activator SPT7
E AGABI2DRAFT148568 AGABI2DRAFT_148568; hypothetical protein K11360 SPT8; transcriptional activator SPT8
E AGABI2DRAFT185055 AGABI2DRAFT_185055; hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E AGABI2DRAFT200483 AGABI2DRAFT_200483; hypothetical protein K11315 TADA3; transcriptional adapter 3
E AGABI2DRAFT182197 AGABI2DRAFT_182197; hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E AGABI2DRAFT189919 AGABI2DRAFT_189919; hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E AGABI2DRAFT152253 AGABI2DRAFT_152253; hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6
E AGABI2DRAFT150150 AGABI2DRAFT_150150; hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E AGABI2DRAFT178999 AGABI2DRAFT_178999; hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E AGABI2DRAFT78470 AGABI2DRAFT_78470; hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E AGABI2DRAFT193774 AGABI2DRAFT_193774; hypothetical protein K11364 SGF29; SAGA-associated factor 29
E AGABI2DRAFT193415 AGABI2DRAFT_193415; hypothetical protein K11365 SGF73; SAGA-associated factor 73
E AGABI2DRAFT204060 AGABI2DRAFT_204060; chromodomain-helicase DNA-binding protein K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E AGABI2DRAFT139664 AGABI2DRAFT_139664; hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor
E AGABI2DRAFT191063 AGABI2DRAFT_191063; hypothetical protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E AGABI2DRAFT229642 AGABI2DRAFT_229642; hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E AGABI2DRAFT121155 AGABI2DRAFT_121155; hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E AGABI2DRAFT225055 AGABI2DRAFT_225055; hypothetical protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E AGABI2DRAFT195037 AGABI2DRAFT_195037; hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
D SWI/SNF complex
E AGABI2DRAFT215383 AGABI2DRAFT_215383; hypothetical protein K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
E AGABI2DRAFT121155 AGABI2DRAFT_121155; hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
E AGABI2DRAFT148258 AGABI2DRAFT_148258; hypothetical protein K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
E AGABI2DRAFT196990 AGABI2DRAFT_196990; hypothetical protein K11759 RSC4; chromatin structure-remodeling complex subunit RSC4
E AGABI2DRAFT194873 AGABI2DRAFT_194873; hypothetical protein K11761 NPL6; chromatin structure-remodeling complex protein RSC7
E AGABI2DRAFT113844 AGABI2DRAFT_113844; hypothetical protein K11763 RSC9; chromatin structure-remodeling complex subunit RSC9
E AGABI2DRAFT193639 AGABI2DRAFT_193639; hypothetical protein K11770 SFH1; chromatin structure-remodeling complex subunit SFH1
E AGABI2DRAFT215383 AGABI2DRAFT_215383; hypothetical protein K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
D Others
E AGABI2DRAFT70431 AGABI2DRAFT_70431; hypothetical protein K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
C Other transcription-related factors
D Transcription elongation factors
E AGABI2DRAFT195610 AGABI2DRAFT_195610; hypothetical protein K03145 TFIIS; transcription elongation factor S-II
E AGABI2DRAFT191648 AGABI2DRAFT_191648; hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E AGABI2DRAFT118476 AGABI2DRAFT_118476; hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E AGABI2DRAFT120886 AGABI2DRAFT_120886; hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E AGABI2DRAFT226511 AGABI2DRAFT_226511; hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E AGABI2DRAFT176563 AGABI2DRAFT_176563; hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E AGABI2DRAFT192008 AGABI2DRAFT_192008; hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E AGABI2DRAFT187183 AGABI2DRAFT_187183; hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E AGABI2DRAFT203789 AGABI2DRAFT_203789; hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E AGABI2DRAFT62161 AGABI2DRAFT_62161; hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E AGABI2DRAFT147675 AGABI2DRAFT_147675; hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E AGABI2DRAFT152533 AGABI2DRAFT_152533; hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E AGABI2DRAFT206048 AGABI2DRAFT_206048; hypothetical protein K06100 SYMPK; symplekin
E AGABI2DRAFT149982 AGABI2DRAFT_149982; hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E AGABI2DRAFT201785 AGABI2DRAFT_201785; hypothetical protein K14845 RAI1; RAT1-interacting protein
E AGABI2DRAFT185958 AGABI2DRAFT_185958; hypothetical protein K15560 NRD1; protein NRD1
E AGABI2DRAFT72010 AGABI2DRAFT_72010; hypothetical protein K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E AGABI2DRAFT189546 AGABI2DRAFT_189546; hypothetical protein K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E AGABI2DRAFT118652 AGABI2DRAFT_118652; hypothetical protein K15174 PAF1; RNA polymerase II-associated factor 1
E AGABI2DRAFT153259 AGABI2DRAFT_153259; hypothetical protein K15175 CDC73; parafibromin
E AGABI2DRAFT117626 AGABI2DRAFT_117626; hypothetical protein K15176 CTR9; RNA polymerase-associated protein CTR9
E AGABI2DRAFT194936 AGABI2DRAFT_194936; hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
E AGABI2DRAFT180093 AGABI2DRAFT_180093; hypothetical protein K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]
D CTDK-I complex
E AGABI2DRAFT150275 AGABI2DRAFT_150275; hypothetical protein K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
E AGABI2DRAFT152024 AGABI2DRAFT_152024; hypothetical protein K15564 CTK2; CTD kinase subunit beta
E AGABI2DRAFT219209 AGABI2DRAFT_219209; hypothetical protein K15565 CTK3; CTD kinase subunit gamma
D 7SK RNP complex
E AGABI2DRAFT74961 AGABI2DRAFT_74961; hypothetical protein K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
D DBIRD complex
D Others
E AGABI2DRAFT183309 AGABI2DRAFT_183309; hypothetical protein K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E AGABI2DRAFT135160 AGABI2DRAFT_135160; hypothetical protein K21751 DR1; down-regulator of transcription 1
E AGABI2DRAFT228657 AGABI2DRAFT_228657; hypothetical protein K21752 DRAP1; Dr1-associated corepressor
E AGABI2DRAFT114027 AGABI2DRAFT_114027; hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E AGABI2DRAFT185336 AGABI2DRAFT_185336; hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E AGABI2DRAFT68868 AGABI2DRAFT_68868; hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E AGABI2DRAFT191251 AGABI2DRAFT_191251; hypothetical protein K17498 SPN1; transcription factor SPN1
E AGABI2DRAFT207430 AGABI2DRAFT_207430; hypothetical protein K20826 RPAP1; RNA polymerase II-associated protein 1
E AGABI2DRAFT183758 AGABI2DRAFT_183758; hypothetical protein K23002 RPAP3; RNA polymerase II-associated protein 3
E AGABI2DRAFT224855 AGABI2DRAFT_224855; hypothetical protein K06666 TUP1; general transcriptional corepressor TUP1
E AGABI2DRAFT190053 AGABI2DRAFT_190053; hypothetical protein K06665 SSN6; general transcriptional corepressor CYC8
E AGABI2DRAFT193683 AGABI2DRAFT_193683; hypothetical protein K12412 MCM1; pheromone receptor transcription factor
E AGABI2DRAFT199478 AGABI2DRAFT_199478; hypothetical protein K23326 CCNK; cyclin K
E AGABI2DRAFT191805 AGABI2DRAFT_191805; hypothetical protein K24104 GPN; GPN-loop GTPase
E AGABI2DRAFT211590 AGABI2DRAFT_211590; hypothetical protein K24104 GPN; GPN-loop GTPase
E AGABI2DRAFT225521 AGABI2DRAFT_225521; hypothetical protein K24104 GPN; GPN-loop GTPase
E AGABI2DRAFT119476 AGABI2DRAFT_119476; hypothetical protein K28237 SLC7A6OS; RNA polymerase II nuclear localization protein
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E AGABI2DRAFT202225 AGABI2DRAFT_202225; hypothetical protein K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E AGABI2DRAFT188003 AGABI2DRAFT_188003; hypothetical protein K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E AGABI2DRAFT209410 AGABI2DRAFT_209410; hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E AGABI2DRAFT186894 AGABI2DRAFT_186894; hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E AGABI2DRAFT199804 AGABI2DRAFT_199804; hypothetical protein K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E AGABI2DRAFT118972 AGABI2DRAFT_118972; hypothetical protein K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E AGABI2DRAFT189727 AGABI2DRAFT_189727; hypothetical protein K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E AGABI2DRAFT202311 AGABI2DRAFT_202311; hypothetical protein K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E AGABI2DRAFT73258 AGABI2DRAFT_73258; hypothetical protein K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E AGABI2DRAFT70931 AGABI2DRAFT_70931; hypothetical protein K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E AGABI2DRAFT179185 AGABI2DRAFT_179185; hypothetical protein K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E AGABI2DRAFT227329 AGABI2DRAFT_227329; hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E AGABI2DRAFT191302 AGABI2DRAFT_191302; hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E AGABI2DRAFT61363 AGABI2DRAFT_61363; hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E AGABI2DRAFT197624 AGABI2DRAFT_197624; hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E AGABI2DRAFT191935 AGABI2DRAFT_191935; hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E AGABI2DRAFT138476 AGABI2DRAFT_138476; hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E AGABI2DRAFT204147 AGABI2DRAFT_204147; hypothetical protein K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E AGABI2DRAFT44722 AGABI2DRAFT_44722; hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E AGABI2DRAFT78178 AGABI2DRAFT_78178; hypothetical protein K15196 BRF1; transcription factor IIIB 90 kDa subunit
E AGABI2DRAFT213705 AGABI2DRAFT_213705; hypothetical protein K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E AGABI2DRAFT187874 AGABI2DRAFT_187874; hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E AGABI2DRAFT202261 AGABI2DRAFT_202261; hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
D TFIIIC, fungi type
E AGABI2DRAFT202261 AGABI2DRAFT_202261; hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E AGABI2DRAFT187874 AGABI2DRAFT_187874; hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E AGABI2DRAFT114796 AGABI2DRAFT_114796; hypothetical protein K15205 TFC6; transcription factor C subunit 6
E AGABI2DRAFT214342 AGABI2DRAFT_214342; hypothetical protein K15206 TFC7; transcription factor C subunit 7
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E AGABI2DRAFT70404 AGABI2DRAFT_70404; hypothetical protein K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
D Others
E AGABI2DRAFT191178 AGABI2DRAFT_191178; hypothetical protein K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E AGABI2DRAFT220361 AGABI2DRAFT_220361; hypothetical protein K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E AGABI2DRAFT188567 AGABI2DRAFT_188567; hypothetical protein K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E AGABI2DRAFT209410 AGABI2DRAFT_209410; hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E AGABI2DRAFT186894 AGABI2DRAFT_186894; hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E AGABI2DRAFT187943 AGABI2DRAFT_187943; hypothetical protein K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E AGABI2DRAFT190080 AGABI2DRAFT_190080; hypothetical protein K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E AGABI2DRAFT191302 AGABI2DRAFT_191302; hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E AGABI2DRAFT61363 AGABI2DRAFT_61363; hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E AGABI2DRAFT197624 AGABI2DRAFT_197624; hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E AGABI2DRAFT191935 AGABI2DRAFT_191935; hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E AGABI2DRAFT138476 AGABI2DRAFT_138476; hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E AGABI2DRAFT44722 AGABI2DRAFT_44722; hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
E AGABI2DRAFT188606 AGABI2DRAFT_188606; hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E AGABI2DRAFT184760 AGABI2DRAFT_184760; hypothetical protein K15219 RRN7; RNA polymerase I-specific transcription initiation factor RRN7
E AGABI2DRAFT67080 AGABI2DRAFT_67080; hypothetical protein K15222 RRN11; RNA polymerase I-specific transcription initiation factor RRN11
E AGABI2DRAFT221859 AGABI2DRAFT_221859; hypothetical protein K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E AGABI2DRAFT191648 AGABI2DRAFT_191648; hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E AGABI2DRAFT118476 AGABI2DRAFT_118476; hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E AGABI2DRAFT120886 AGABI2DRAFT_120886; hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E AGABI2DRAFT226511 AGABI2DRAFT_226511; hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E AGABI2DRAFT175561 AGABI2DRAFT_175561; SNF2 family DNA-dependent ATPase K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
E AGABI2DRAFT150275 AGABI2DRAFT_150275; hypothetical protein K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
E AGABI2DRAFT152024 AGABI2DRAFT_152024; hypothetical protein K15564 CTK2; CTD kinase subunit beta
E AGABI2DRAFT219209 AGABI2DRAFT_219209; hypothetical protein K15565 CTK3; CTD kinase subunit gamma
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E AGABI2DRAFT195784 AGABI2DRAFT_195784; hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E AGABI2DRAFT208287 AGABI2DRAFT_208287; hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 17, 2025