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Transcription Machinery - Acidianus sp. HS-5
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
E HS5_04150 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
E HS5_13480 tfb_1; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
E HS5_20560 tfb_2; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
E HS5_28050 transcription initiation factor IIB 2 K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E HS5_28100 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIE
E HS5_21830 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFIIF
D TFIIH
E HS5_11290 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E HS5_26040 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E HS5_20850 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4
E HS5_26950 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
E HS5_26410 GTPase K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
E HS5_28100 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
E HS5_28100 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
E HS5_20850 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4
E HS5_26950 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
E HS5_21180 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
E HS5_21210 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
E HS5_21200 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
E HS5_21220 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
E HS5_20360 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
E HS5_20860 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
E HS5_21900 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
E HS5_21750 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
E HS5_21230 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
E HS5_27480 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
E HS5_26270 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
E HS5_20320 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
E HS5_21050 hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
C Basal transcription factors
D TFB
E HS5_04150 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
E HS5_13480 tfb_1; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
E HS5_20560 tfb_2; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
E HS5_28050 transcription initiation factor IIB 2 K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E HS5_21830 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
E HS5_15600 hypothetical protein K03057 tfs; transcription factor S
E HS5_25340 DNA-directed RNA polymerase subunit M K03057 tfs; transcription factor S
E HS5_26280 hypothetical protein K03057 tfs; transcription factor S
E HS5_26290 transcription factor S K03057 tfs; transcription factor S
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 17, 2025