+D GENES KO
#
KEGG Orthology (KO) - Aminobacterium colombiense
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:aco00010]
D Amico_0344 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Amico_1366 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Amico_1047 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Amico_0027 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Amico_0571 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Amico_0836 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Amico_0834 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Amico_0369 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Amico_0558 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Amico_0589 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Amico_0733 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Amico_0763 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Amico_0764 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Amico_1585 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Amico_1077 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Amico_1018 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0795 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_1450 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0512 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0513 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1017 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_0796 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1449 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_0560 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_1563 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:aco00020]
D Amico_1301 Isocitrate dehydrogenase (NAD(+)) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1018 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0795 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_1450 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0512 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0513 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1017 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_0796 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1449 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_0514 Pyruvate/ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Amico_1016 Pyruvate/ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Amico_0797 Pyruvate/ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Amico_0517 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Amico_1019 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Amico_0794 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Amico_0516 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Amico_0515 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Amico_0134 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Amico_0136 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Amico_1563 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Amico_1585 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Amico_1077 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:aco00030]
D Amico_1366 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Amico_0388 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Amico_1388 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Amico_1460 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Amico_1461 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Amico_1477 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Amico_1827 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0746 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Amico_1665 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Amico_1672 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Amico_1671 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Amico_1873 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Amico_0167 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Amico_1239 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Amico_1765 aromatic amino acid beta-eliminating lyase/threonine aldolase K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29]
D Amico_0027 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Amico_0571 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Amico_1047 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:aco00040]
D Amico_1677 Altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D Amico_0740 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Amico_0388 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Amico_0500 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:aco00051]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0500 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Amico_1047 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Amico_0728 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Amico_0027 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Amico_0571 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Amico_0836 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Amico_1359 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00052 Galactose metabolism [PATH:aco00052]
D Amico_0740 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0344 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Amico_1670 Mandelate racemase/muconate lactonizing protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:aco00500]
D Amico_0740 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Amico_0232 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Amico_0235 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Amico_0233 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Amico_0234 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Amico_0248 glycosyl transferase group 1 K13057 treT; trehalose synthase [EC:2.4.1.245]
D Amico_1244 beta-phosphoglucomutase family hydrolase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Amico_0249 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0344 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Amico_1366 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aco00520]
D Amico_0741 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Amico_0739 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Amico_0745 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Amico_0879 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Amico_0821 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Amico_0880 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Amico_1726 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Amico_1727 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Amico_1720 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D Amico_0344 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0740 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Amico_1366 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Amico_1359 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00620 Pyruvate metabolism [PATH:aco00620]
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Amico_1077 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Amico_1018 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0795 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_1450 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0512 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0513 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1017 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_0796 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1449 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1585 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1071 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Amico_0733 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Amico_0183 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Amico_0560 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Amico_0599 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Amico_0225 Protein of unknown function DUF2088 K22373 larA; lactate racemase [EC:5.1.2.1]
D Amico_1225 Protein of unknown function DUF2088 K22373 larA; lactate racemase [EC:5.1.2.1]
D Amico_1304 Protein of unknown function DUF2088 K22373 larA; lactate racemase [EC:5.1.2.1]
D Amico_1353 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Amico_1790 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Amico_0137 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Amico_0751 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Amico_1549 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0270 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0883 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0134 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Amico_0136 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Amico_1563 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Amico_0763 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Amico_0764 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_0101 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aco00630]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_0266 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Amico_0888 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Amico_0889 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Amico_1184 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Amico_1641 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Amico_1415 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Amico_1785 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1900 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_0197 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1757 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Amico_1581 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Amico_1756 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Amico_1582 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Amico_1579 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1580 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Amico_1239 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Amico_1665 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Amico_1672 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Amico_1829 dihydrodipicolinate synthetase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16]
D Amico_1555 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:aco00640]
D Amico_0560 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Amico_1071 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Amico_1692 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Amico_0266 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Amico_0888 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Amico_0889 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Amico_0515 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Amico_0516 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:aco00650]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_1212 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Amico_1211 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Amico_1839 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Amico_1842 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Amico_1841 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Amico_1840 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Amico_1549 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0270 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0883 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0269 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Amico_0268 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Amico_0885 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Amico_0502 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Amico_0505 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Amico_1692 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Amico_1077 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Amico_1018 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0795 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_1450 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0512 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Amico_0513 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1017 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_0796 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1449 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Amico_1324 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Amico_1354 Alcohol dehydrogenase zinc-binding domain protein K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
C 00660 C5-Branched dibasic acid metabolism [PATH:aco00660]
D Amico_0515 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Amico_0516 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Amico_0100 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Amico_1704 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Amico_0099 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Amico_1703 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Amico_0098 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:aco00562]
D Amico_0037 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Amico_0836 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:aco00190]
D Amico_1558 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Amico_1556 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Amico_0807 H(+)-transporting two-sector ATPase K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Amico_0986 H(+)-transporting two-sector ATPase K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Amico_0808 H(+)-transporting two-sector ATPase K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Amico_0985 H(+)-transporting two-sector ATPase K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Amico_0988 H+-ATPase subunit C-like protein K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Amico_0805 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Amico_0809 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Amico_0984 H+transporting two-sector ATPase D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Amico_0804 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Amico_0806 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D Amico_0801 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D Amico_0991 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Amico_0802 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Amico_0990 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Amico_0803 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Amico_1260 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:aco00680]
D Amico_1555 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Amico_1785 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1900 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_0197 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1239 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Amico_0589 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Amico_0027 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Amico_0571 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Amico_1047 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Amico_0056 formylmethanofuran dehydrogenase subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D Amico_1071 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Amico_0764 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Amico_0369 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Amico_0558 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Amico_1753 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1309 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1663 Malate/L-lactate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
D Amico_1325 Malate/L-lactate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
C 00910 Nitrogen metabolism [PATH:aco00910]
D Amico_1906 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Amico_0151 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Amico_0374 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Amico_1415 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Amico_1369 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Amico_0204 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:aco00920]
D Amico_0969 phosphoesterase DHHA1 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Amico_0097 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Amico_0096 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Amico_0198 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:aco00061]
D Amico_1062 acyl carrier protein K02078 acpP; acyl carrier protein
D Amico_1064 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Amico_1066 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Amico_1723 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Amico_1061 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Amico_1881 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1063 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1503 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Amico_1065 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Amico_1791 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1611 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_0376 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:aco00071]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_1791 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1611 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_0376 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:aco00561]
D Amico_1239 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Amico_1067 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Amico_0561 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Amico_1088 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Amico_0052 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:aco00564]
D Amico_1622 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Amico_0561 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Amico_1088 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Amico_0874 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Amico_0254 CDP-diacylglycerol/serineO-phosphatidyl transferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Amico_0253 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Amico_1428 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyl transferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Amico_0391 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Amico_0941 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:aco00230]
D Amico_1015 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0746 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Amico_1166 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Amico_1170 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Amico_1168 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Amico_1165 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Amico_1163 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Amico_1164 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Amico_1167 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Amico_1171 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Amico_1162 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Amico_1048 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Amico_1169 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Amico_0058 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Amico_1571 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Amico_1175 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Amico_1013 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Amico_1762 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Amico_0892 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Amico_0778 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Amico_0977 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Amico_0295 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Amico_0245 Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Amico_0583 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Amico_1084 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Amico_0120 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Amico_1564 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Amico_0597 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Amico_0280 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Amico_1454 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Amico_0743 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Amico_1404 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Amico_0648 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Amico_0750 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Amico_1849 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Amico_1833 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D Amico_1834 amidohydrolase K01466 allB; allantoinase [EC:3.5.2.5]
D Amico_1004 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Amico_0204 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:aco00240]
D Amico_1601 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Amico_1600 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Amico_1598 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Amico_1599 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Amico_0095 dihydroorotate dehydrogenase 2 K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D Amico_1596 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Amico_1597 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Amico_1187 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Amico_0750 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Amico_1464 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Amico_1474 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Amico_1089 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Amico_0423 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Amico_1571 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Amico_1175 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Amico_1762 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Amico_0882 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Amico_1059 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Amico_1602 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Amico_1404 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Amico_1012 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Amico_0756 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Amico_1564 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Amico_0120 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Amico_0406 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Amico_1053 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Amico_1133 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Amico_0702 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Amico_0723 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Amico_1828 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:aco00250]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1255 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Amico_1686 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Amico_0548 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Amico_1174 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Amico_1512 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Amico_1454 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Amico_1048 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Amico_1601 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Amico_1692 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Amico_1369 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Amico_0374 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Amico_1415 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Amico_1164 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Amico_0741 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Amico_1166 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:aco00260]
D Amico_0014 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Amico_0010 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Amico_0287 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0491 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0519 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_1642 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0573 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Amico_0071 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Amico_0072 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Amico_0572 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Amico_0290 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Amico_1785 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1900 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_0197 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1239 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Amico_0369 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Amico_0558 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Amico_1753 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1309 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1786 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Amico_1757 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Amico_1581 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Amico_1756 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Amico_1582 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Amico_1579 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1580 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Amico_0254 CDP-diacylglycerol/serineO-phosphatidyl transferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Amico_0077 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Amico_0078 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Amico_0913 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Amico_0526 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:aco00270]
D Amico_0097 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Amico_0096 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Amico_0198 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Amico_0119 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Amico_0147 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Amico_0568 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Amico_0341 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Amico_0892 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Amico_1030 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Amico_1032 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Amico_0461 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Amico_1031 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Amico_0014 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Amico_0010 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Amico_0287 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0491 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0519 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_1642 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_1844 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1766 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D Amico_0077 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Amico_0078 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Amico_0913 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Amico_1753 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1309 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:aco00280]
D Amico_1844 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_0266 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Amico_0888 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Amico_0889 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Amico_0028 6-phosphogluconate dehydrogenase NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Amico_1324 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aco00290]
D Amico_0100 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Amico_1704 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Amico_0099 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Amico_1703 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Amico_0098 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Amico_1844 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Amico_0101 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:aco00300]
D Amico_0287 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0491 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0519 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_1642 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Amico_0014 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Amico_0010 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Amico_1768 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Amico_0011 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Amico_0012 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Amico_1800 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Amico_1543 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Amico_1427 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Amico_0230 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Amico_0228 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Amico_0013 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-ac etyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D Amico_0227 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Amico_0073 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Amico_0364 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Amico_0814 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Amico_0815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:aco00310]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_0185 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Amico_1212 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Amico_1211 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:aco00220]
D Amico_0870 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Amico_1174 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Amico_1512 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Amico_1224 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Amico_1164 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Amico_1415 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Amico_0374 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Amico_0204 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:aco00330]
D Amico_0022 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Amico_0342 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Amico_0341 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Amico_0568 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Amico_0783 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Amico_0237 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Amico_0238 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1829 dihydrodipicolinate synthetase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16]
C 00340 Histidine metabolism [PATH:aco00340]
D Amico_0682 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Amico_0683 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Amico_0677 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Amico_0679 histidine biosynthesis protein K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Amico_0680 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Amico_0678 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Amico_0681 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Amico_1039 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1227 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_0684 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Amico_1905 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Amico_1886 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Amico_1885 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Amico_0715 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Amico_1539 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:aco00350]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1039 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1227 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:aco00360]
D Amico_0528 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1039 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1227 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_0146 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:aco00380]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aco00400]
D Amico_0526 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1039 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1227 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:aco00410]
D Amico_1692 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Amico_0009 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Amico_1828 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:aco00430]
D Amico_1696 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Amico_0374 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Amico_1071 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:aco00450]
D Amico_0119 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Amico_0461 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Amico_0727 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Amico_1056 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Amico_1157 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Amico_0615 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:aco00460]
D Amico_1696 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Amico_0548 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Amico_1785 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1900 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_0197 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:aco00470]
D Amico_0212 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Amico_1389 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Amico_0187 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0188 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_1469 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_1164 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Amico_0817 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Amico_0956 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Amico_1255 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Amico_1686 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Amico_1766 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D Amico_0230 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Amico_0228 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Amico_0736 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:aco00480]
D Amico_1696 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Amico_0498 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Amico_1649 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Amico_0342 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Amico_0341 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:aco00540]
D Amico_1502 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Amico_1504 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Amico_1505 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Amico_1499 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Amico_1498 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Amico_1495 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Amico_1493 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Amico_1494 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Amico_1501 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Amico_1490 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Amico_1492 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Amico_0274 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Amico_1361 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Amico_0377 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Amico_1357 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Amico_1360 Nucleotidyl transferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D Amico_1486 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Amico_1485 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:aco00542]
D Amico_0881 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aco00541]
D Amico_0740 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Amico_1734 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Amico_1731 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Amico_1784 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Amico_1359 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Amico_0745 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Amico_0880 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Amico_1726 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Amico_1727 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Amico_1720 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:aco00550]
D Amico_0879 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Amico_0821 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Amico_0820 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Amico_0817 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Amico_0814 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Amico_0187 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0188 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_1469 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Amico_0875 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Amico_1466 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Amico_0816 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Amico_0819 Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Amico_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Amico_0170 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Amico_0604 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Amico_0813 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:aco00552]
D Amico_1466 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Amico_0881 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Amico_0994 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Amico_0841 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Amico_0052 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:aco00543]
D Amico_0881 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Amico_0097 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:aco00730]
D Amico_0255 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Amico_0163 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Amico_0850 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Amico_0256 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Amico_0257 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Amico_1698 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Amico_0854 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Amico_0648 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:aco00740]
D Amico_0998 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Amico_1000 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Amico_0997 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Amico_0999 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Amico_0967 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Amico_0256 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Amico_1015 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
D Amico_0071 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Amico_0072 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Amico_0572 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:aco00760]
D Amico_0297 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Amico_1013 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Amico_1571 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Amico_1175 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Amico_0842 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Amico_0750 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Amico_1821 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Amico_0868 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Amico_1249 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Amico_1280 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Amico_0395 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Amico_0848 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Amico_0502 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Amico_0505 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Amico_1318 carboxyvinyl-carboxyphosphonatephosphorylmutase K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
C 00770 Pantothenate and CoA biosynthesis [PATH:aco00770]
D Amico_0086 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Amico_1604 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Amico_0087 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Amico_0045 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Amico_0009 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Amico_1378 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Amico_1082 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Amico_0750 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Amico_1073 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Amico_1178 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Amico_0790 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Amico_1844 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Amico_1828 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:aco00780]
D Amico_1061 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Amico_1881 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1063 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1503 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Amico_0039 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:aco00785]
D Amico_1578 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Amico_1574 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1585 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Amico_1757 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Amico_1581 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Amico_1756 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Amico_1582 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Amico_1579 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Amico_1580 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:aco00790]
D Amico_1413 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Amico_1698 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Amico_1446 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Amico_1445 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Amico_0893 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Amico_0998 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Amico_1414 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Amico_0427 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Amico_0828 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Amico_0829 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Amico_0830 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Amico_0826 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Amico_0827 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Amico_0904 metal dependent phosphohydrolase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:aco00670]
D Amico_1537 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Amico_1546 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Amico_1545 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Amico_1538 Methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Amico_1785 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1900 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_0197 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Amico_1168 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Amico_1169 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Amico_0715 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Amico_1539 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Amico_1021 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Amico_1579 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Amico_0723 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:aco00860]
D Amico_1653 Uroporphyrinogen decarboxylase (URO-D) K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Amico_0456 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Amico_0438 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Amico_1045 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:aco00900]
D Amico_0850 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Amico_0873 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Amico_0979 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D Amico_1154 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Amico_0871 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Amico_1024 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_0851 Geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Amico_0875 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
D Amico_1324 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Amico_1388 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Amico_1460 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Amico_1461 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:aco00523]
D Amico_1734 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Amico_1731 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Amico_1784 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:aco01054]
D Amico_1255 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Amico_1686 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Amico_1731 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Amico_1311 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
C 00332 Carbapenem biosynthesis [PATH:aco00332]
D Amico_0237 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Amico_0238 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:aco00261]
D Amico_0014 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Amico_0010 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Amico_1768 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Amico_0011 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Amico_0012 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:aco00521]
D Amico_0344 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Amico_0419 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Amico_0037 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Amico_1734 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Amico_1731 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Amico_1784 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Amico_0344 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:aco00525]
D Amico_1734 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Amico_1731 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:aco00401]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1039 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1227 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Amico_0068 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
C 00333 Prodigiosin biosynthesis
D Amico_1064 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Amico_1881 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1063 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Amico_1062 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Amico_0147 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D Amico_0736 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:aco00362]
D Amico_0146 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Amico_1236 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Amico_1549 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0270 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0883 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0269 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Amico_0268 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Amico_0885 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:aco00627]
D Amico_0183 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Amico_1212 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Amico_1211 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:aco00622]
D Amico_1236 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Amico_0146 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
D Amico_1315 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Amico_1316 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Amico_1313 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Amico_1314 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:aco00621]
D Amico_1236 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Amico_0146 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:aco03020]
D Amico_0619 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Amico_0620 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Amico_0656 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Amico_1451 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:aco03010]
D Amico_1023 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Amico_1189 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Amico_0633 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Amico_0655 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Amico_0644 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Amico_1422 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Amico_0623 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Amico_0641 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Amico_0299 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Amico_0626 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Amico_0654 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Amico_0622 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Amico_0653 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Amico_0640 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Amico_0700 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Amico_0552 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Amico_0636 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Amico_1420 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Amico_0631 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Amico_0690 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Amico_1436 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Amico_0316 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Amico_0630 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Amico_0627 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Amico_0628 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Amico_0639 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Amico_0642 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Amico_0318 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Amico_1418 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Amico_0317 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Amico_0315 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Amico_0298 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Amico_0637 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Amico_0646 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Amico_0634 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Amico_0657 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Amico_0643 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Amico_0556 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Amico_0706 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Amico_0846 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Amico_0632 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Amico_0629 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Amico_0638 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Amico_0747 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Amico_0844 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Amico_0853 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Amico_0635 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Amico_0645 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Amico_0722 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Amico_1069 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Amico_0312 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Amico_0705 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Amico_0652 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Amico_0621 RNA 2-O ribose methyltransferase substrate binding protein K07590 RP-L7A; large subunit ribosomal protein L7A
D Amico_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0014 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0026 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:aco00970]
D Amico_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Amico_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Amico_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Amico_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Amico_R0009 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Amico_R0012 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Amico_R0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Amico_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Amico_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Amico_R0021 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Amico_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Amico_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Amico_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Amico_R0040 tRNA-His K14226 tRNA-His; tRNA His
D Amico_R0027 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Amico_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Amico_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Amico_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Amico_R0047 tRNA-Met K14230 tRNA-Met; tRNA Met
D Amico_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met
D Amico_R0010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Amico_R0053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Amico_R0043 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Amico_R0046 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Amico_R0051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0058 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Amico_R0055 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Amico_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Amico_R0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Amico_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Amico_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D Amico_R0008 tRNA-Val K14237 tRNA-Val; tRNA Val
D Amico_R0034 tRNA-Val K14237 tRNA-Val; tRNA Val
D Amico_0978 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Amico_1261 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Amico_1373 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Amico_1372 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Amico_1374 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Amico_1029 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Amico_0539 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Amico_0375 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Amico_0759 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Amico_0760 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Amico_0703 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Amico_0996 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Amico_1157 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Amico_1002 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Amico_0615 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Amico_1021 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Amico_0894 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Amico_0688 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Amico_0961 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Amico_1376 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Amico_1424 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Amico_0279 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Amico_0080 YbaK/prolyl-tRNA synthetase associated region K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Amico_0538 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Amico_0709 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Amico_0710 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Amico_0412 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Amico_1093 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:aco03060]
D Amico_0647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Amico_0313 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Amico_0296 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Amico_0592 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Amico_0593 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Amico_0591 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Amico_0694 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Amico_1426 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Amico_0551 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Amico_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Amico_1234 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Amico_1528 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Amico_1536 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:aco04122]
D Amico_0163 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Amico_0150 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Amico_1043 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Amico_0828 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Amico_0161 MoaD family protein K03636 moaD; sulfur-carrier protein
D Amico_0165 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Amico_0829 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Amico_0830 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:aco03018]
D Amico_0589 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Amico_0701 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Amico_0350 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Amico_1476 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Amico_1405 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Amico_1467 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Amico_1801 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1441 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_0582 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:aco03030]
D Amico_1573 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Amico_0732 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Amico_0731 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Amico_1052 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Amico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Amico_1417 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Amico_0949 DnaB domain protein helicase domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Amico_0587 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Amico_1421 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Amico_1783 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Amico_1526 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Amico_1259 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Amico_1375 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:aco03410]
D Amico_1041 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Amico_0329 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Amico_0166 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Amico_0876 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Amico_1572 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Amico_1607 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Amico_0735 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Amico_1259 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Amico_0596 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Amico_1375 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:aco03420]
D Amico_0749 DEAD/DEAH box helicase domain protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Amico_0781 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Amico_0780 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Amico_1001 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Amico_1179 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Amico_1259 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Amico_1375 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:aco03430]
D Amico_1027 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Amico_0714 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Amico_1026 DNA mismatch repair protein domain protein K03572 mutL; DNA mismatch repair protein MutL
D Amico_1179 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Amico_1033 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Amico_0852 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Amico_0596 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Amico_1421 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Amico_0732 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Amico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Amico_0731 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Amico_1052 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Amico_1573 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Amico_1375 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Amico_1148 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:aco03440]
D Amico_0596 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Amico_1421 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Amico_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Amico_0758 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Amico_0981 recombination protein RecR K06187 recR; recombination protein RecR
D Amico_0394 recA protein K03553 recA; recombination protein RecA
D Amico_1259 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Amico_0865 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Amico_0864 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Amico_0866 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Amico_1407 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Amico_0732 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Amico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Amico_0731 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Amico_1052 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Amico_1573 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Amico_1081 Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:aco02010]
D Amico_1561 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D Amico_1560 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein
D Amico_1559 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Amico_0259 NMT1/THI5 like domain protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D Amico_0260 binding-protein-dependent transport systems inner membrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D Amico_0261 ABC transporter related protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D Amico_1888 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Amico_1577 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Amico_0910 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Amico_1889 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Amico_1576 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Amico_0909 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Amico_1890 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Amico_0908 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Amico_1575 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Amico_0034 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Amico_0032 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Amico_0033 ABC transporter related protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Amico_0244 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Amico_1570 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Amico_1568 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Amico_0242 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Amico_0241 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Amico_1569 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Amico_1567 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Amico_0243 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Amico_0044 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Amico_1678 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Amico_0043 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Amico_1679 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Amico_0042 binding-protein-dependent transport systems inner membrane component K02038 pstA; phosphate transport system permease protein
D Amico_1680 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Amico_1681 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Amico_0041 ABC transporter related protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Amico_1173 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Amico_1251 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Amico_1383 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Amico_0415 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Amico_0416 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Amico_0155 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Amico_1433 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Amico_0156 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Amico_1432 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Amico_0157 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Amico_1431 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Amico_0158 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Amico_1430 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Amico_0159 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Amico_1429 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Amico_1669 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Amico_1668 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Amico_1667 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein
D Amico_1863 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Amico_1861 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Amico_1862 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Amico_0066 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Amico_0064 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Amico_0063 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Amico_0839 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein
D Amico_0067 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein
D Amico_0065 conserved hypothetical protein K16915 cbiL; nickel transport protein
D Amico_1847 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Amico_0660 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Amico_0658 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Amico_0659 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Amico_1500 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Amico_0576 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Amico_1458 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Amico_1459 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Amico_1496 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
D Amico_0728 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:aco03070]
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
D Amico_0592 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Amico_0593 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Amico_0313 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Amico_0296 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Amico_0647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Amico_0591 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Amico_0694 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Amico_1426 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Amico_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Amico_0551 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:aco02020]
D Amico_1684 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Amico_1683 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Amico_1698 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Amico_0044 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Amico_1678 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Amico_0697 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Amico_0145 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Amico_1297 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Amico_1298 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D Amico_0144 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D Amico_1299 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Amico_0143 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Amico_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Amico_0323 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Amico_1339 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Amico_0445 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D Amico_0446 Citrate (pro-3S)-lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Amico_0447 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D Amico_0175 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR
D Amico_1353 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Amico_1790 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Amico_0137 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Amico_1209 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Amico_1207 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Amico_1206 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D Amico_1202 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Amico_1201 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Amico_1200 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Amico_1199 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Amico_1198 Type II secretion system F domain protein K12510 tadB; tight adherence protein B
D Amico_1197 Type II secretion system F domain protein K12511 tadC; tight adherence protein C
D Amico_1415 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Amico_1212 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Amico_1211 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_1515 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Amico_0199 Extracellular solute-binding protein, family 7 K11688 dctP; C4-dicarboxylate-binding protein DctP
D Amico_1587 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_1542 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_0132 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_0200 hypothetical protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_0919 hypothetical protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_1320 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_1319 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1690 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1879 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1830 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1541 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0133 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0210 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0918 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1586 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
D Amico_1713 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Amico_0880 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Amico_0342 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:aco02024]
D Amico_0068 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D Amico_0155 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Amico_1433 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Amico_0156 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Amico_1432 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Amico_0157 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Amico_1431 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Amico_0158 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Amico_1430 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Amico_0159 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Amico_1429 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Amico_1791 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1611 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_0376 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1000 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Amico_0788 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_0468 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_1656 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_1777 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_0467 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_1778 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_1661 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_0784 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_0466 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_1779 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_1660 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_0785 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_0786 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Amico_1780 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Amico_1658 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Amico_0787 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Amico_0694 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Amico_0313 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Amico_0296 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Amico_0647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Amico_0591 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Amico_1426 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Amico_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Amico_0551 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D Amico_1515 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
C 02040 Flagellar assembly
D Amico_1627 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Amico_0589 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:aco04980]
D Amico_0438 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Amico_0887 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:aco01501]
D Amico_1217 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0351 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
D Amico_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Amico_0604 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Amico_0813 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:aco01502]
D Amico_1339 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Amico_0187 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0188 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_1469 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0212 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Amico_1389 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Amico_0815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Amico_0816 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Amico_0819 Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aco01503]
D Amico_0292 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Amico_0697 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Amico_1217 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0351 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
D Amico_1502 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Amico_0323 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:aco01000]
C 01001 Protein kinases [BR:aco01001]
D Amico_0387 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Amico_0673 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Amico_1684 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Amico_1209 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:aco01009]
D Amico_1031 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:aco01002]
D Amico_0264 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Amico_1205 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Amico_0577 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D Amico_0583 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Amico_1166 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Amico_0741 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Amico_1311 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D Amico_0247 ThiJ/PfpI domain protein K05520 yhbO; deglycase [EC:3.5.1.124]
D Amico_1634 peptidase U34 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D Amico_0173 peptidase U34 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D Amico_0194 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Amico_1339 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Amico_1649 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Amico_1648 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Amico_1800 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Amico_1543 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Amico_1427 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Amico_1193 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Amico_1903 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Amico_1004 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Amico_0649 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Amico_1655 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Amico_1385 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Amico_0023 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D Amico_0779 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Amico_0872 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Amico_1651 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Amico_1650 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D Amico_0697 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Amico_0898 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Amico_0896 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Amico_1528 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Amico_1536 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Amico_1456 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Amico_1518 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Amico_1696 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Amico_0291 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D Amico_0856 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D Amico_0171 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:aco01003]
D Amico_0052 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D Amico_0232 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Amico_0170 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Amico_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Amico_0994 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Amico_0881 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Amico_1820 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Amico_0249 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:aco01005]
D Amico_1502 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Amico_1498 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Amico_1504 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Amico_1505 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Amico_1499 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Amico_1495 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Amico_0274 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Amico_1492 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Amico_1494 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Amico_1490 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Amico_1501 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Amico_1493 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Amico_0377 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Amico_1486 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Amico_1485 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D Amico_1361 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Amico_1357 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Amico_0881 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aco01011]
D Amico_0879 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Amico_0821 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Amico_0820 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Amico_0817 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Amico_0814 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Amico_0187 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0188 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_1469 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Amico_0212 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Amico_1389 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Amico_0816 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Amico_0819 Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Amico_1466 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Amico_0578 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Amico_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Amico_0170 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Amico_0604 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Amico_0813 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Amico_1339 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Amico_0366 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Amico_0858 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Amico_0862 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Amico_0292 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:aco01004]
D Amico_1064 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Amico_1066 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Amico_1723 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Amico_1061 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Amico_1881 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1063 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Amico_1503 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Amico_1065 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Amico_0560 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D Amico_1791 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1611 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_0376 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1067 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Amico_0561 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Amico_1088 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:aco01008]
D Amico_1255 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Amico_1686 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:aco01006]
D Amico_0851 Geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Amico_0875 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Amico_1025 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:aco01007]
D Amico_0978 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Amico_1261 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Amico_0412 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Amico_1093 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Amico_1002 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Amico_1424 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Amico_0615 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Amico_0961 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Amico_0894 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Amico_0688 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Amico_1376 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Amico_0539 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Amico_0375 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Amico_0538 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Amico_0759 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Amico_0760 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Amico_0996 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Amico_0279 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Amico_0080 YbaK/prolyl-tRNA synthetase associated region K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Amico_0703 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Amico_1029 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Amico_0709 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Amico_0710 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Amico_0518 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1183 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0142 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_0368 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Amico_1039 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1227 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Amico_1786 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Amico_0119 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Amico_1692 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Amico_1844 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:aco03000]
D Amico_0544 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Amico_0424 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Amico_0422 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Amico_1772 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Amico_1310 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Amico_0130 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Amico_0380 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Amico_1346 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D Amico_0020 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Amico_0716 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Amico_1838 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Amico_1688 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Amico_1883 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Amico_1605 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Amico_0085 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Amico_1908 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Amico_0162 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Amico_1245 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Amico_0039 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Amico_1334 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Amico_1710 Ribonuclease R winged-helix domain protein K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI
D Amico_1153 phosphoribosyltransferase K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D Amico_0355 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator
D Amico_0590 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D Amico_1516 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Amico_0869 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Amico_1190 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Amico_1856 transcriptional regulator, CdaR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D Amico_0206 transcriptional regulator, PucR family K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D Amico_1851 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Amico_1443 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Amico_0562 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D Amico_1059 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Amico_1602 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Amico_1434 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Amico_0810 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:aco03021]
D Amico_0656 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Amico_0619 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Amico_0620 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Amico_1627 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Amico_0975 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Amico_1034 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Amico_0314 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Amico_0673 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Amico_1468 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Amico_1476 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Amico_1451 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03019 Messenger RNA biogenesis [BR:aco03019]
D Amico_0367 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Amico_0611 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Amico_1060 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Amico_1467 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Amico_1405 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Amico_0370 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Amico_0350 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Amico_0589 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Amico_0701 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Amico_1476 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Amico_1481 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Amico_1801 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1441 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_0582 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Amico_0831 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:aco03011]
D Amico_1023 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Amico_1189 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Amico_0633 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Amico_0655 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Amico_0644 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Amico_1422 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Amico_0623 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Amico_0641 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Amico_0299 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Amico_0626 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Amico_0654 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Amico_0622 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Amico_0653 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Amico_0640 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Amico_0700 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Amico_0552 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Amico_0636 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Amico_1420 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Amico_0631 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Amico_0690 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Amico_1436 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Amico_0316 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Amico_0630 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Amico_0627 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Amico_0628 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Amico_0639 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Amico_0642 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Amico_1418 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Amico_0317 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Amico_0315 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Amico_0318 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Amico_0298 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Amico_0637 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Amico_0646 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Amico_0634 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Amico_0657 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Amico_0643 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Amico_0556 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Amico_0706 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Amico_0846 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Amico_0632 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Amico_0629 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Amico_0638 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Amico_0844 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Amico_0853 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Amico_0635 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Amico_0645 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Amico_0722 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Amico_1069 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Amico_0312 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Amico_0705 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Amico_0652 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Amico_0747 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Amico_0621 RNA 2-O ribose methyltransferase substrate binding protein K07590 RP-L7A; large subunit ribosomal protein L7A
D Amico_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0014 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0026 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:aco03009]
D Amico_1060 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Amico_0367 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Amico_0757 GTP-binding protein Era K03595 era; GTPase
D Amico_0843 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Amico_0975 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Amico_1034 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Amico_0314 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Amico_1078 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Amico_0386 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Amico_1074 Protein of unknown function methylase putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Amico_1853 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Amico_0811 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Amico_0614 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Amico_0849 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Amico_0782 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Amico_0983 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Amico_0103 methyltransferase small K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Amico_0216 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Amico_0800 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Amico_0530 (uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Amico_1090 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Amico_0371 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Amico_0960 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Amico_0554 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Amico_0390 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Amico_1439 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Amico_0611 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Amico_1028 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Amico_0350 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Amico_1080 ribosome-associated GTPase EngA K03977 engA; GTPase
D Amico_1527 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D Amico_1087 GTP-binding proten HflX K03665 hflX; GTPase
D Amico_0618 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Amico_0597 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Amico_0970 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Amico_0976 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Amico_0840 iojap-like protein K09710 ybeB; ribosome-associated protein
D Amico_0754 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Amico_1182 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Amico_0429 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Amico_1070 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:aco03016]
D Amico_1177 CBS domain containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Amico_1662 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Amico_1547 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Amico_1548 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease
D Amico_0279 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Amico_0080 YbaK/prolyl-tRNA synthetase associated region K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Amico_0961 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Amico_0688 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Amico_0615 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Amico_1424 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Amico_1376 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Amico_0539 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Amico_1029 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Amico_0375 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Amico_0703 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Amico_0996 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Amico_1002 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Amico_0894 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Amico_0538 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Amico_0709 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Amico_0710 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Amico_0412 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Amico_1093 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Amico_0598 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Amico_1437 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Amico_1076 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Amico_0116 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Amico_0661 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Amico_0968 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Amico_0163 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Amico_0618 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Amico_1025 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Amico_0363 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Amico_0004 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Amico_1056 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Amico_0692 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Amico_R0036 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Amico_0294 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Amico_0393 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Amico_0759 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Amico_0760 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Amico_0978 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Amico_1261 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Amico_1230 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Amico_1377 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Amico_1381 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Amico_1438 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Amico_1520 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Amico_0555 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Amico_0613 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Amico_1043 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Amico_1363 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Amico_0150 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Amico_0861 S-adenosylmethionine/tRNA-ribosyltransferase-iso merase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Amico_1414 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Amico_1387 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Amico_0617 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Amico_0777 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Amico_0793 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Amico_0580 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Amico_0792 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Amico_1072 cytidyltransferase-related domain protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D Amico_0701 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:aco03012]
D Amico_1009 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D Amico_0972 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Amico_0704 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Amico_0347 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Amico_1188 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Amico_0625 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Amico_0311 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Amico_1371 translation elongation factor G K02355 fusA; elongation factor G
D Amico_0624 translation elongation factor G K02355 fusA; elongation factor G
D Amico_1156 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D Amico_0725 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Amico_1186 ribosome recycling factor K02838 frr; ribosome recycling factor
D Amico_0726 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Amico_0748 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Amico_0651 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Amico_1038 translation elongation factor P K02356 efp; elongation factor P
D Amico_1055 hypothetical protein K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:aco03110]
D Amico_0172 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Amico_0563 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Amico_0897 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Amico_1517 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Amico_1801 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1441 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_0582 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Amico_1440 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Amico_0169 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Amico_1442 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Amico_0192 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Amico_0581 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Amico_0697 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Amico_0779 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Amico_1181 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Amico_1180 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Amico_0081 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Amico_1617 Thioredoxin domain protein K03671 TXN; thioredoxin
D Amico_1398 Thioredoxin domain protein K03671 TXN; thioredoxin
D Amico_1367 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:aco04131]
D Amico_0367 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Amico_1234 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Amico_0834 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Amico_0733 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Amico_0405 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Amico_0431 protein of unknown function DUF500 K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system
C 03051 Proteasome [BR:aco03051]
C 03032 DNA replication proteins [BR:aco03032]
D Amico_1783 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Amico_1079 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Amico_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Amico_1417 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Amico_0949 DnaB domain protein helicase domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Amico_1131 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Amico_0587 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Amico_1421 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Amico_0732 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Amico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Amico_1052 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Amico_1573 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Amico_0731 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Amico_1526 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Amico_1259 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Amico_1375 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Amico_1148 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Amico_0252 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Amico_1647 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Amico_1521 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:aco03036]
D Amico_1060 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Amico_1079 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Amico_0169 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Amico_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Amico_0612 SMC domain protein K03529 smc; chromosome segregation protein
D Amico_1092 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Amico_1091 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Amico_0823 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Amico_1459 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Amico_0813 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Amico_0855 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Amico_0818 cell cycle protein K03588 ftsW; cell division protein FtsW
D Amico_1458 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Amico_0824 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Amico_0292 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Amico_1217 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0351 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0605 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Amico_0606 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Amico_0607 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Amico_1408 DivIVA domain protein K04074 divIVA; cell division initiation protein
D Amico_1409 hypothetical protein K09772 sepF; cell division inhibitor SepF
D Amico_1346 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D Amico_0662 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Amico_0601 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Amico_0602 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Amico_0608 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Amico_1852 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Amico_1851 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Amico_0004 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Amico_1853 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Amico_1520 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Amico_1519 integrase family protein K03733 xerC; integrase/recombinase XerC
D Amico_1014 integrase family protein K04763 xerD; integrase/recombinase XerD
D Amico_0947 integrase family protein K04763 xerD; integrase/recombinase XerD
D Amico_0895 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D Amico_0833 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:aco03400]
D Amico_0477 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Amico_1846 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Amico_0329 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Amico_1041 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Amico_1257 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Amico_1010 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Amico_1133 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Amico_0702 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Amico_0876 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Amico_1572 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Amico_0166 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Amico_1607 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Amico_0735 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Amico_0319 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Amico_0596 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Amico_1375 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Amico_1259 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Amico_0781 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Amico_0780 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Amico_1001 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Amico_1179 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Amico_0619 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Amico_0620 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Amico_0656 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Amico_0749 DEAD/DEAH box helicase domain protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Amico_1027 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Amico_0714 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Amico_1026 DNA mismatch repair protein domain protein K03572 mutL; DNA mismatch repair protein MutL
D Amico_1033 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Amico_0852 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Amico_0732 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Amico_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Amico_1052 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Amico_1573 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Amico_0731 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Amico_1421 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Amico_1148 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Amico_0394 recA protein K03553 recA; recombination protein RecA
D Amico_0865 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Amico_0864 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Amico_0866 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Amico_1081 Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Amico_0685 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Amico_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Amico_1407 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Amico_0758 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Amico_0981 recombination protein RecR K06187 recR; recombination protein RecR
D Amico_0847 SMC domain protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D Amico_0123 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Amico_0252 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Amico_1647 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Amico_1521 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Amico_1079 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Amico_0966 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V
D Amico_1406 regulatory protein RecX K03565 recX; regulatory protein
D Amico_0691 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Amico_0120 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Amico_0969 phosphoesterase DHHA1 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:aco03029]
D Amico_0972 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Amico_0704 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Amico_1188 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Amico_0625 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Amico_0311 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Amico_1371 translation elongation factor G K02355 fusA; elongation factor G
D Amico_0624 translation elongation factor G K02355 fusA; elongation factor G
D Amico_0757 GTP-binding protein Era K03595 era; GTPase
D Amico_0412 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Amico_0688 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Amico_0539 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Amico_1424 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Amico_1373 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Amico_1372 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Amico_1374 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Amico_1421 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Amico_1507 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Amico_1801 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1441 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1442 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Amico_0582 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Amico_0581 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Amico_1440 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Amico_0163 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Amico_0694 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:aco02000]
D Amico_1496 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Amico_1561 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D Amico_1560 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein
D Amico_1559 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Amico_1888 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Amico_1577 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Amico_0910 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Amico_1889 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Amico_1576 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Amico_0909 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Amico_1890 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Amico_0908 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Amico_1575 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Amico_0034 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Amico_0032 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Amico_0033 ABC transporter related protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Amico_0259 NMT1/THI5 like domain protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D Amico_0260 binding-protein-dependent transport systems inner membrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D Amico_0261 ABC transporter related protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D Amico_0244 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Amico_1570 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Amico_1568 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Amico_0242 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Amico_0241 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Amico_1569 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Amico_1567 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Amico_0243 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Amico_0360 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Amico_0359 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Amico_0358 ABC transporter related protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Amico_0044 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Amico_1678 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Amico_0043 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Amico_1679 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Amico_0042 binding-protein-dependent transport systems inner membrane component K02038 pstA; phosphate transport system permease protein
D Amico_1680 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Amico_1681 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Amico_0041 ABC transporter related protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Amico_1173 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Amico_1251 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Amico_1383 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Amico_0415 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Amico_0416 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Amico_0155 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Amico_1433 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Amico_0156 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Amico_1432 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Amico_0157 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Amico_1431 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Amico_0158 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Amico_1430 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Amico_0159 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Amico_1429 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Amico_1669 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Amico_1668 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Amico_1667 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein
D Amico_0049 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Amico_0226 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Amico_0069 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Amico_0048 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Amico_0046 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Amico_0047 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Amico_0070 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Amico_0788 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_0468 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_1656 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_1777 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Amico_0467 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_1778 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_1661 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_0784 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Amico_0466 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_1779 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_1660 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_0785 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Amico_0786 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Amico_1780 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Amico_1658 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Amico_0787 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Amico_0053 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Amico_0054 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Amico_0055 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Amico_0334 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Amico_0335 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Amico_0336 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Amico_1863 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Amico_1861 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Amico_1862 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Amico_0064 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Amico_0066 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Amico_0063 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Amico_0839 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein
D Amico_0067 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein
D Amico_0065 conserved hypothetical protein K16915 cbiL; nickel transport protein
D Amico_1847 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Amico_0660 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Amico_0658 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Amico_0659 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Amico_1500 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Amico_0576 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Amico_1458 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Amico_1459 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Amico_0489 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Amico_1327 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Amico_1348 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Amico_0488 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Amico_1349 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Amico_1329 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Amico_1365 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Amico_0396 Xanthine/uracil/vitamin C permease K14611 SLC23A1; solute carrier family 23 (nucleobase transporter), member 1
D Amico_1636 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Amico_1816 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Amico_1562 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Amico_1293 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D Amico_0182 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Amico_0405 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Amico_0434 formate/nitrite transporter K21993 fdhC; formate transporter
D Amico_1776 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Amico_0152 MscS Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D Amico_0478 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Amico_0566 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Amico_1194 magnesium transporter K06213 mgtE; magnesium transporter
D Amico_0300 magnesium transporter K06213 mgtE; magnesium transporter
D Amico_1534 MgtE integral membrane region K06213 mgtE; magnesium transporter
D Amico_0339 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Amico_0338 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Amico_1281 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Amico_1291 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Amico_0755 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Amico_0333 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
D Amico_1713 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Amico_1507 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Amico_0231 AsmA family protein K09800 tamB; translocation and assembly module TamB
D Amico_1295 LrgA family protein K06518 cidA; holin-like protein
D Amico_0219 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Amico_1845 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Amico_1608 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D Amico_0327 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D Amico_1226 L-lactate permease K03303 lutP; lactate permease
D Amico_0084 sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D Amico_1289 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D Amico_1288 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Amico_0707 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein
D Amico_1287 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Amico_0708 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Amico_1185 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Amico_0057 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D Amico_0276 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Amico_1282 Chromate transporter K07240 chrA; chromate transporter
D Amico_1283 Chromate transporter K07240 chrA; chromate transporter
D Amico_0199 Extracellular solute-binding protein, family 7 K11688 dctP; C4-dicarboxylate-binding protein DctP
D Amico_1587 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_1542 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_0132 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_0200 hypothetical protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_0919 hypothetical protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_1320 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Amico_1319 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1690 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1879 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1830 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1541 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0133 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0210 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_0918 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1586 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Amico_1674 TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein
D Amico_1340 TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein
D Amico_1675 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D Amico_1689 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D Amico_1750 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D Amico_1341 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D Amico_0089 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D Amico_1676 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_1832 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_1588 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_0217 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_1342 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_0131 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_0208 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_0920 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein
D Amico_0038 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D Amico_0281 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter
D Amico_1234 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Amico_1269 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Amico_1268 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Amico_1275 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Amico_1274 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Amico_1273 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Amico_0578 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Amico_0420 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D Amico_1640 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Amico_1639 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Amico_0145 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Amico_1297 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Amico_1298 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D Amico_0144 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D Amico_1299 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Amico_0143 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Amico_0262 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D Amico_0818 cell cycle protein K03588 ftsW; cell division protein FtsW
D Amico_0220 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Amico_0337 TonB family protein K03832 tonB; periplasmic protein TonB
D Amico_0586 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Amico_1549 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0270 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0883 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Amico_0751 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Amico_0267 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Amico_0886 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Amico_0269 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Amico_0268 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Amico_0885 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Amico_1618 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Amico_1217 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0351 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_1246 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Amico_1247 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Amico_0215 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Amico_1248 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Amico_0214 small GTP-binding protein K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:aco02044]
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
D Amico_0264 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Amico_0766 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Amico_0776 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Amico_1205 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Amico_1202 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Amico_1201 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Amico_1200 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Amico_1199 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Amico_1198 Type II secretion system F domain protein K12510 tadB; tight adherence protein B
D Amico_1197 Type II secretion system F domain protein K12511 tadC; tight adherence protein C
D Amico_1207 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Amico_1206 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D Amico_1380 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Amico_0406 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Amico_1379 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Amico_1426 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Amico_0592 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Amico_0313 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Amico_0593 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Amico_0296 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Amico_0647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Amico_0551 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Amico_1050 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Amico_0591 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Amico_0694 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:aco02042]
D Amico_1291 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Amico_0755 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:aco02022]
D Amico_1684 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Amico_1683 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Amico_1209 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Amico_0175 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR
D Amico_1515 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
C 02035 Bacterial motility proteins [BR:aco02035]
D Amico_1515 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Amico_0766 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Amico_0264 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Amico_0776 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Amico_1207 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Amico_1206 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D Amico_1205 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Amico_1202 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Amico_1201 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Amico_1200 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Amico_1199 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:aco04812]
D Amico_0860 AMMECR1 domain protein K06990 MEMO1; MEMO1 family protein
D Amico_0662 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Amico_0601 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Amico_0824 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Amico_0823 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Amico_0605 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Amico_0606 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Amico_0607 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Amico_1852 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Amico_1851 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:aco04147]
D Amico_0589 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Amico_0834 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Amico_0733 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Amico_1648 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Amico_0582 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Amico_1801 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1441 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Amico_1366 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Amico_0977 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Amico_0625 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Amico_0311 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Amico_0367 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Amico_1437 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Amico_1791 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1611 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_0376 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Amico_1210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Amico_1031 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Amico_0648 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Amico_0058 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Amico_1512 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Amico_1174 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Amico_0235 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Amico_1415 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Amico_1698 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Amico_1753 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1309 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Amico_1169 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Amico_1584 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_1583 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Amico_0836 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:aco02048]
D Amico_0123 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Amico_0122 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Amico_0127 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Amico_0125 hypothetical protein K19075 cst2; CRISPR-associated protein Cst2
D Amico_0124 CRISPR-associated protein DevS K19090 cas5t; CRISPR-associated protein Cas5t
D Amico_0451 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Amico_0450 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Amico_0449 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Amico_1148 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Amico_1334 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Amico_0824 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Amico_0662 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Amico_0601 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Amico_0163 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:aco04090]
C 01504 Antimicrobial resistance genes [BR:aco01504]
D Amico_1339 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Amico_0323 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Amico_1217 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0351 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Amico_0302 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aco00537]
D Amico_1698 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Amico_1648 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:aco03100]
D Amico_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Amico_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Amico_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Amico_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Amico_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Amico_R0009 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Amico_R0012 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Amico_R0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Amico_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Amico_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Amico_R0021 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Amico_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Amico_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Amico_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Amico_R0040 tRNA-His K14226 tRNA-His; tRNA His
D Amico_R0027 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Amico_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Amico_R0057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Amico_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Amico_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Amico_R0047 tRNA-Met K14230 tRNA-Met; tRNA Met
D Amico_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met
D Amico_R0010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Amico_R0053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Amico_R0043 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Amico_R0046 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Amico_R0051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0058 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Amico_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Amico_R0055 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Amico_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Amico_R0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Amico_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Amico_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D Amico_R0008 tRNA-Val K14237 tRNA-Val; tRNA Val
D Amico_R0034 tRNA-Val K14237 tRNA-Val; tRNA Val
D Amico_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0014 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0026 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Amico_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Amico_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Amico_R0036 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Amico_R0052 ssrA; tmRNA as predicted by Rfam (RF00023), score 199.64 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Amico_1591 Pyruvate dehydrogenase (acetyl-transferring) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Amico_1590 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Amico_1531 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Amico_1530 Pyruvate/ketoisovalerate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Amico_1803 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D Amico_1250 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D Amico_1237 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D Amico_0050 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Amico_0472 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Amico_1823 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Amico_1553 nickel-dependent hydrogenase large subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D Amico_1554 NADH ubiquinone oxidoreductase 20 kDa subunit K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D Amico_1557 NADP-reducing hydrogenase, subunit B K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D Amico_1264 NADH dehydrogenase (quinone) K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2]
D Amico_1265 NADH dehydrogenase (ubiquinone) 30 kDa subunit K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2]
D Amico_1266 NADH ubiquinone oxidoreductase 20 kDa subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D Amico_0399 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Amico_0400 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D Amico_1368 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Amico_1395 glycine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Amico_1396 glycine reductase K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Amico_1397 Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D Amico_1394 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D Amico_1393 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D Amico_1391 fatty acid synthesis plsX protein K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Amico_1392 betaine reductase K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Amico_0859 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Amico_1565 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Amico_0471 pyruvate formate lyase activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Amico_0331 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Amico_1693 hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263]
D Amico_1694 Pyridoxal-5'-phosphate-dependent protein beta subunit K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D Amico_1614 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Amico_0696 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Amico_0113 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Amico_0761 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Amico_0762 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Amico_0737 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Amico_1323 Formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Amico_1593 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Amico_0029 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Amico_1532 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Amico_0289 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Amico_0753 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Amico_0616 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Amico_1854 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Amico_0789 beta-lactamase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Amico_0202 N-acyl-D-aspartate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D Amico_0205 N-acyl-D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D Amico_0211 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D Amico_1022 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Amico_0117 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Amico_0523 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Amico_0791 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Amico_1792 Queuosine synthesis-like protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Amico_1793 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Amico_1826 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Amico_0221 hypothetical protein K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D Amico_0106 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Amico_0105 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Amico_0110 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Amico_0462 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Amico_1044 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Amico_0059 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Amico_0272 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D Amico_1290 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin
D Amico_1152 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin
D Amico_0107 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Amico_0108 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Amico_0109 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Amico_0164 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Amico_1272 putative monovalent cation/H+ antiporter subunit B K14113 ehbD; energy-converting hydrogenase B subunit D
D Amico_1270 Na+/H+ antiporter MnhB subunit-related protein K14118 ehbI; energy-converting hydrogenase B subunit I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Amico_1410 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Amico_1356 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Amico_0585 Molybdopterin-guanine dinucleotide biosynthesis protein-like protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Amico_1774 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Amico_0494 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Amico_0349 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Amico_0900 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Amico_1136 prophage antirepressor K07741 antB; anti-repressor protein
D Amico_0535 Tex-like protein protein-like protein K06959 tex; protein Tex
D Amico_1085 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D Amico_1514 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
D Amico_0410 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Amico_0899 trigger factor K03545 tig; trigger factor
D Amico_1350 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Amico_1401 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Amico_1402 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Amico_1403 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Amico_1386 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE
D Amico_1046 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Amico_1524 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Amico_0686 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Amico_0600 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Amico_1525 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Amico_1523 DNA protecting protein DprA K04096 smf; DNA processing protein
D Amico_0436 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Amico_1775 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D Amico_0982 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Amico_0304 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Amico_1219 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Amico_0718 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Amico_0340 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Amico_0570 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Amico_1400 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Amico_0114 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Amico_1390 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D Amico_0695 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D Amico_0497 urea amidolyase related protein K06350 kipA; antagonist of KipI
D Amico_0496 Allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D Amico_0537 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Amico_1457 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Amico_1452 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Amico_1620 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Amico_0752 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Amico_0669 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Amico_0222 capsule biosynthesis protein CapC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D Amico_0487 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Amico_1764 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA
D Amico_0389 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D Amico_0282 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Amico_1682 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Amico_1818 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D Amico_0827 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Amico_0713 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Amico_0278 Patatin K07001 K07001; NTE family protein
D Amico_0140 Patatin K07001 K07001; NTE family protein
D Amico_0905 LemA family protein K03744 lemA; LemA protein
D Amico_0181 Cupin 2 conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein
C 99997 Function unknown
D Amico_1638 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Amico_1606 Dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein K06889 K06889; uncharacterized protein
D Amico_1105 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D Amico_1109 late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D Amico_1114 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein
D Amico_1113 major tail tube protein K06908 FII; Bacteriophage tail tube protein
D Amico_1533 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Amico_1589 protein of unknown function DUF296 K06934 K06934; uncharacterized protein
D Amico_0546 protein of unknown function DUF296 K06934 K06934; uncharacterized protein
D Amico_0663 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Amico_0553 conserved hypothetical protein K06960 K06960; uncharacterized protein
D Amico_0384 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D Amico_0912 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein
D Amico_1364 SufBD protein K07033 K07033; uncharacterized protein
D Amico_1814 PfoR protein K07035 K07035; uncharacterized protein
D Amico_0320 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Amico_1882 aldo/keto reductase K07079 K07079; uncharacterized protein
D Amico_0443 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_0507 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_1771 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_1806 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_1702 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_0720 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_0925 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Amico_0060 permease K07089 K07089; uncharacterized protein
D Amico_0288 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Amico_1914 phosphohydrolase (DHH superfamily)-like protein K07097 K07097; uncharacterized protein
D Amico_0942 metallophosphoesterase K07098 K07098; uncharacterized protein
D Amico_1687 metallophosphoesterase K07098 K07098; uncharacterized protein
D Amico_1813 3H domain protein K07105 K07105; uncharacterized protein
D Amico_0520 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Amico_0521 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Amico_0149 conserved hypothetical protein K07112 K07112; uncharacterized protein
D Amico_0271 Putative ammonia monooxygenase-like protein K07120 K07120; uncharacterized protein
D Amico_0093 glucose-inhibited division protein A K07137 K07137; uncharacterized protein
D Amico_1695 protein of unknown function DUF161 K07149 K07149; uncharacterized protein
D Amico_0240 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Amico_0693 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Amico_1196 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Amico_1513 protein of unknown function DUF501 K09009 K09009; uncharacterized protein
D Amico_1435 Protein of unknown function YOR215C K09117 K09117; uncharacterized protein
D Amico_0115 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein
D Amico_0559 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D Amico_0671 protein of unknown function DUF355 K09129 K09129; uncharacterized protein
D Amico_0332 protein of unknown function DUF369 K09143 K09143; uncharacterized protein
D Amico_0191 conserved hypothetical protein K09700 K09700; uncharacterized protein
D Amico_0971 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Amico_0550 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein
D Amico_1455 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein
D Amico_0845 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D Amico_1489 protein of unknown function DUF1022 K07276 K07276; uncharacterized protein
D Amico_0974 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 22, 2024