+D GENES KO #

  KEGG Orthology (KO) - Actinomyces sp. zg-332

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:actm00010] D HCQ94_02765 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HCQ94_03765 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCQ94_02775 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D HCQ94_00520 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_05315 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_03970 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCQ94_03980 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCQ94_03975 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HCQ94_00210 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCQ94_00885 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCQ94_02300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCQ94_00340 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HCQ94_03905 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HCQ94_04110 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_05955 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_00215 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:actm00020] D HCQ94_01450 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_04470 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HCQ94_04475 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HCQ94_01330 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HCQ94_01335 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HCQ94_01325 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HCQ94_02355 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HCQ94_00215 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HCQ94_03905 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HCQ94_04110 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:actm00030] D HCQ94_03765 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCQ94_05185 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D HCQ94_02670 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HCQ94_00200 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCQ94_01475 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HCQ94_00455 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D HCQ94_00490 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_00865 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HCQ94_00520 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_05315 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_02775 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:actm00040] D HCQ94_01065 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HCQ94_01195 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCQ94_02670 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:actm00051] D HCQ94_05205 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HCQ94_02775 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D HCQ94_00520 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_05315 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_03970 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCQ94_01475 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:actm00052] D HCQ94_05215 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HCQ94_05220 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D HCQ94_01655 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HCQ94_01195 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_02765 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HCQ94_02205 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] C 00053 Ascorbate and aldarate metabolism D HCQ94_01065 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:actm00500] D HCQ94_01195 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_02765 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HCQ94_03765 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:actm00520] D HCQ94_00765 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HCQ94_00745 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HCQ94_00860 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HCQ94_04705 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCQ94_05390 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HCQ94_02765 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_01195 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCQ94_01065 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HCQ94_05215 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HCQ94_05220 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D HCQ94_01655 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HCQ94_02205 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D HCQ94_03765 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCQ94_05205 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:actm00620] D HCQ94_03905 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HCQ94_04110 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_05955 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D HCQ94_04590 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCQ94_02300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCQ94_04820 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HCQ94_02355 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HCQ94_00215 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HCQ94_00340 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:actm00630] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HCQ94_02500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_01000 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_01450 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] C 00640 Propanoate metabolism [PATH:actm00640] D HCQ94_04590 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_04475 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HCQ94_04470 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:actm00650] D HCQ94_01330 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HCQ94_01335 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HCQ94_01325 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HCQ94_01150 zinc-dependent alcohol dehydrogenase family protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D HCQ94_04805 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCQ94_04800 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:actm00660] D HCQ94_04805 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCQ94_04800 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HCQ94_04475 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HCQ94_04470 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:actm00562] D HCQ94_05320 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HCQ94_02075 CDP-alcohol phosphatidyltransferase family protein K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D HCQ94_03970 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:actm00190] D HCQ94_05515 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HCQ94_05510 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HCQ94_05505 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D HCQ94_05500 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D HCQ94_05495 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D HCQ94_05490 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D HCQ94_05485 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D HCQ94_05480 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HCQ94_05475 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HCQ94_05465 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HCQ94_05460 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HCQ94_01330 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HCQ94_01335 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HCQ94_01325 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HCQ94_01725 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HCQ94_01720 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HCQ94_02000 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HCQ94_02010 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HCQ94_02005 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HCQ94_01980 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HCQ94_01985 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HCQ94_05670 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:actm00710] D HCQ94_03975 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HCQ94_03980 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCQ94_00520 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_05315 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_00200 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCQ94_01475 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HCQ94_03970 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCQ94_02670 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HCQ94_00340 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:actm00720] D HCQ94_00340 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HCQ94_02355 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HCQ94_01330 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HCQ94_01335 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HCQ94_01325 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HCQ94_04470 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HCQ94_04475 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HCQ94_00130 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HCQ94_01005 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HCQ94_04590 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00680 Methane metabolism [PATH:actm00680] D HCQ94_01000 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCQ94_00885 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HCQ94_00520 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_05315 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCQ94_04590 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCQ94_00210 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:actm00910] D HCQ94_00245 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HCQ94_02500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_05560 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:actm00920] D HCQ94_02260 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HCQ94_02265 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:actm00061] D HCQ94_02285 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D HCQ94_02285 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:actm00561] D HCQ94_05955 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D HCQ94_03860 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D HCQ94_02770 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:actm00564] D HCQ94_02965 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HCQ94_02770 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HCQ94_05305 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D HCQ94_03590 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:actm00230] D HCQ94_02885 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_00865 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HCQ94_03945 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HCQ94_03925 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HCQ94_03935 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HCQ94_03920 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D HCQ94_03940 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HCQ94_03960 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HCQ94_03950 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HCQ94_03955 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HCQ94_03930 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HCQ94_03440 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HCQ94_03505 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HCQ94_01845 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HCQ94_05665 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D HCQ94_01355 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HCQ94_03585 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HCQ94_02520 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HCQ94_04135 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D HCQ94_04575 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HCQ94_02640 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HCQ94_00120 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HCQ94_00125 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HCQ94_05910 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HCQ94_04175 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D HCQ94_03435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HCQ94_00900 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HCQ94_00195 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HCQ94_05055 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D HCQ94_04515 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D HCQ94_00690 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HCQ94_02070 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D HCQ94_05560 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:actm00240] D HCQ94_03675 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HCQ94_03670 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D HCQ94_03665 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HCQ94_03650 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D HCQ94_03655 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D HCQ94_03645 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HCQ94_03660 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HCQ94_02530 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HCQ94_03585 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HCQ94_03815 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HCQ94_05705 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D HCQ94_05910 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HCQ94_00400 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HCQ94_00120 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HCQ94_00125 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HCQ94_02440 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:actm00250] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HCQ94_03375 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HCQ94_04150 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HCQ94_00195 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HCQ94_03955 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HCQ94_03675 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HCQ94_03670 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D HCQ94_00245 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HCQ94_04545 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HCQ94_02500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_00765 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HCQ94_03945 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:actm00260] D HCQ94_03580 aminotransferase class V-fold PLP-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48] D HCQ94_01000 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCQ94_00210 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_05555 serine/threonine protein kinase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1] D HCQ94_00100 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCQ94_03415 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HCQ94_04505 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:actm00270] D HCQ94_02260 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HCQ94_02265 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HCQ94_04145 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HCQ94_03365 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D HCQ94_04555 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCQ94_04790 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCQ94_01230 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HCQ94_04300 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HCQ94_00100 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:actm00280] D HCQ94_04790 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:actm00290] D HCQ94_03415 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HCQ94_04805 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCQ94_04800 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HCQ94_04795 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HCQ94_04785 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HCQ94_04790 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis D HCQ94_06155 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] C 00310 Lysine degradation D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:actm00220] D HCQ94_05565 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D HCQ94_05570 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D HCQ94_02500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_05560 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D HCQ94_00245 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:actm00330] D HCQ94_05555 serine/threonine protein kinase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1] D HCQ94_05545 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D HCQ94_04140 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D HCQ94_04545 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HCQ94_01750 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HCQ94_01755 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D HCQ94_04675 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism [PATH:actm00360] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HCQ94_04140 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D HCQ94_02480 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component C 00380 Tryptophan metabolism [PATH:actm00380] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_04140 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:actm00400] D HCQ94_04505 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D HCQ94_01040 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D HCQ94_04590 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:actm00450] D HCQ94_02490 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D HCQ94_06140 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HCQ94_00810 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D HCQ94_01000 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:actm00470] D HCQ94_04685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_06150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_02510 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HCQ94_01570 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:actm00480] D HCQ94_01230 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D HCQ94_04100 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HCQ94_02250 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HCQ94_03075 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HCQ94_05185 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis D HCQ94_00485 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 00542 O-Antigen repeat unit biosynthesis [PATH:actm00542] D HCQ94_01970 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:actm00541] D HCQ94_01195 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCQ94_01655 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HCQ94_02205 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D HCQ94_01065 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HCQ94_02220 GDP-mannose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HCQ94_05205 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HCQ94_00860 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:actm00550] D HCQ94_04705 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCQ94_05390 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HCQ94_01585 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HCQ94_01570 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HCQ94_04685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_06150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_02150 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCQ94_03630 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCQ94_01565 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HCQ94_01580 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HCQ94_05780 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D HCQ94_05775 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:actm00552] D HCQ94_03630 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCQ94_01970 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D HCQ94_01970 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:actm00543] D HCQ94_01970 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HCQ94_02260 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:actm00730] D HCQ94_02095 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HCQ94_01415 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HCQ94_00690 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:actm00740] D HCQ94_04970 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HCQ94_02885 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism D HCQ94_02085 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D HCQ94_03485 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:actm00760] D HCQ94_03505 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HCQ94_01845 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HCQ94_01760 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HCQ94_04905 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HCQ94_05535 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D HCQ94_03850 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D HCQ94_06125 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D HCQ94_06130 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:actm00770] D HCQ94_04805 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCQ94_04800 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HCQ94_04795 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HCQ94_04785 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HCQ94_03340 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HCQ94_01040 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HCQ94_00760 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D HCQ94_02650 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HCQ94_01685 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HCQ94_04790 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism C 00785 Lipoic acid metabolism [PATH:actm00785] D HCQ94_01165 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D HCQ94_01170 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_03905 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HCQ94_04110 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HCQ94_01450 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] C 00790 Folate biosynthesis [PATH:actm00790] D HCQ94_05655 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HCQ94_05650 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HCQ94_03595 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HCQ94_01200 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:actm00670] D HCQ94_00130 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HCQ94_01005 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HCQ94_01000 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCQ94_03935 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HCQ94_03930 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HCQ94_02660 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HCQ94_02440 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 00830 Retinol metabolism C 00860 Porphyrin metabolism D HCQ94_04755 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:actm00130] D HCQ94_05520 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HCQ94_04455 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D HCQ94_04450 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D HCQ94_04460 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D HCQ94_05580 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:actm00900] D HCQ94_02095 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HCQ94_02555 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HCQ94_00225 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HCQ94_02565 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HCQ94_00965 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HCQ94_00945 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D HCQ94_02150 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HCQ94_00200 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D HCQ94_02220 GDP-mannose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D HCQ94_02220 GDP-mannose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:actm00332] D HCQ94_01750 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HCQ94_01755 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:actm00521] D HCQ94_02765 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HCQ94_05820 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCQ94_05320 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HCQ94_02220 GDP-mannose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HCQ94_02765 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D HCQ94_02220 GDP-mannose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites D HCQ94_04145 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D HCQ94_04140 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:actm00643] D HCQ94_04140 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:actm03020] D HCQ94_00535 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HCQ94_00540 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HCQ94_00720 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HCQ94_02645 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:actm03010] D HCQ94_02320 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HCQ94_02335 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HCQ94_00615 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HCQ94_02590 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HCQ94_00670 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HCQ94_06050 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HCQ94_00560 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HCQ94_00655 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HCQ94_00740 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HCQ94_00580 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HCQ94_00715 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HCQ94_00555 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HCQ94_00710 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HCQ94_00650 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HCQ94_04965 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HCQ94_04035 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HCQ94_00630 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HCQ94_06040 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HCQ94_00605 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HCQ94_01870 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HCQ94_05355 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HCQ94_00600 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HCQ94_00585 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HCQ94_00590 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HCQ94_00645 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HCQ94_00660 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HCQ94_05335 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HCQ94_06035 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HCQ94_05340 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HCQ94_05360 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HCQ94_00735 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HCQ94_00635 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HCQ94_00680 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HCQ94_00620 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HCQ94_00725 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HCQ94_00665 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HCQ94_04015 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HCQ94_04625 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HCQ94_01735 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HCQ94_00610 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HCQ94_00595 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HCQ94_00640 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HCQ94_01740 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HCQ94_01665 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HCQ94_00625 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HCQ94_00675 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HCQ94_01950 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HCQ94_01930 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HCQ94_05400 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HCQ94_06210 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HCQ94_04630 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HCQ94_00705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HCQ94_01250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HCQ94_01255 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:actm00970] D HCQ94_01775 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCQ94_00045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCQ94_05750 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_01140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_02230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_04870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_05035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCQ94_00255 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HCQ94_02050 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HCQ94_04750 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HCQ94_00250 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCQ94_04735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCQ94_02045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCQ94_02120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCQ94_03710 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCQ94_04665 tRNA-His K14226 tRNA-His; tRNA His D HCQ94_00040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCQ94_00915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_04395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_04085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_02305 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_00290 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCQ94_04385 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCQ94_05405 tRNA-Met K14230 tRNA-Met; tRNA Met D HCQ94_02505 tRNA-Met K14230 tRNA-Met; tRNA Met D HCQ94_05060 tRNA-Ile K14230 tRNA-Met; tRNA Met D HCQ94_00260 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HCQ94_03705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCQ94_05960 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCQ94_00375 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCQ94_05700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCQ94_05760 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCQ94_06100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCQ94_05280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCQ94_05410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCQ94_05375 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HCQ94_05415 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HCQ94_03895 tRNA-Val K14237 tRNA-Val; tRNA Val D HCQ94_02055 tRNA-Val K14237 tRNA-Val; tRNA Val D HCQ94_02125 tRNA-Val K14237 tRNA-Val; tRNA Val D HCQ94_04755 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCQ94_04830 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HCQ94_04825 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HCQ94_04835 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HCQ94_02605 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCQ94_02980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCQ94_02160 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCQ94_02065 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HCQ94_05795 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HCQ94_00235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HCQ94_00810 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HCQ94_02660 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HCQ94_02290 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HCQ94_01390 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCQ94_03600 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HCQ94_01045 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HCQ94_01935 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCQ94_02575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HCQ94_03310 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HCQ94_03305 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HCQ94_03550 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCQ94_04425 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:actm03060] D HCQ94_00685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HCQ94_05370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HCQ94_03965 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCQ94_03450 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HCQ94_03445 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HCQ94_02740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCQ94_04045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCQ94_04050 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCQ94_03080 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HCQ94_03085 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D HCQ94_04010 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system D HCQ94_04400 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome D HCQ94_00435 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:actm03018] D HCQ94_01730 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HCQ94_00885 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCQ94_04960 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HCQ94_03400 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HCQ94_01945 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HCQ94_04950 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HCQ94_01265 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCQ94_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCQ94_06060 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:actm03030] D HCQ94_01385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HCQ94_01630 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCQ94_05880 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HCQ94_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCQ94_06095 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HCQ94_06045 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCQ94_04005 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HCQ94_02315 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCQ94_04845 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:actm03410] D HCQ94_00265 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HCQ94_05250 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HCQ94_01010 endonuclease/exonuclease/phosphatase family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HCQ94_02315 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCQ94_04845 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:actm03420] D HCQ94_00880 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HCQ94_02690 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HCQ94_03490 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HCQ94_02695 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HCQ94_02525 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCQ94_04480 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCQ94_02315 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCQ94_04845 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:actm03430] D HCQ94_02525 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCQ94_04480 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCQ94_00960 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HCQ94_06045 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCQ94_01630 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCQ94_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCQ94_05880 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HCQ94_01385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HCQ94_04845 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:actm03440] D HCQ94_06045 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCQ94_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HCQ94_01925 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HCQ94_00390 recR; recombination protein RecR K06187 recR; recombination protein RecR D HCQ94_04915 recA; recombinase RecA K03553 recA; recombination protein RecA D HCQ94_02315 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCQ94_03465 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HCQ94_03460 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HCQ94_03470 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HCQ94_03150 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HCQ94_01630 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCQ94_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCQ94_05880 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HCQ94_01385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:actm03250] D HCQ94_00065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:actm02010] D HCQ94_00425 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D HCQ94_03145 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D HCQ94_03140 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HCQ94_05295 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCQ94_04285 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D HCQ94_05715 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D HCQ94_05720 ABC transporter permease K02072 metI; D-methionine transport system permease protein D HCQ94_05725 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D HCQ94_00975 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00980 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCQ94_00990 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCQ94_00995 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCQ94_05065 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HCQ94_05735 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein D HCQ94_05115 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HCQ94_05120 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HCQ94_02950 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HCQ94_02955 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:actm03070] D HCQ94_03450 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HCQ94_03445 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HCQ94_05370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HCQ94_03965 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCQ94_00685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HCQ94_02740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCQ94_04050 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCQ94_04045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCQ94_03080 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HCQ94_03085 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:actm02020] D HCQ94_02725 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D HCQ94_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HCQ94_05735 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein D HCQ94_05745 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D HCQ94_04820 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HCQ94_03175 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HCQ94_03170 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D HCQ94_02500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_05985 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HCQ94_01725 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HCQ94_01720 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HCQ94_01440 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:actm02024] D HCQ94_02285 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HCQ94_05985 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HCQ94_00975 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00980 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCQ94_00990 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCQ94_00995 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCQ94_05370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HCQ94_03965 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCQ94_00685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HCQ94_02740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCQ94_04050 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCQ94_04045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D HCQ94_02795 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HCQ94_00885 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance D HCQ94_00975 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00980 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCQ94_00990 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCQ94_00995 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein C 01502 Vancomycin resistance [PATH:actm01502] D HCQ94_04685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_06150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_01565 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HCQ94_01580 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance D HCQ94_00065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:actm01000] C 01001 Protein kinases [BR:actm01001] D HCQ94_00180 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HCQ94_03175 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins C 01002 Peptidases and inhibitors [BR:actm01002] D HCQ94_04575 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HCQ94_03945 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HCQ94_00765 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HCQ94_03375 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HCQ94_02250 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HCQ94_03075 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HCQ94_02245 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D HCQ94_04100 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HCQ94_00695 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HCQ94_03345 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HCQ94_05175 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HCQ94_05660 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HCQ94_05430 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D HCQ94_03690 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HCQ94_03695 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HCQ94_01495 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HCQ94_04010 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HCQ94_04675 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 01003 Glycosyltransferases [BR:actm01003] D HCQ94_01970 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:actm01005] D HCQ94_00485 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HCQ94_01970 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:actm01011] D HCQ94_04705 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCQ94_05390 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HCQ94_01585 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HCQ94_01570 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HCQ94_04685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_06150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCQ94_02510 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HCQ94_01565 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HCQ94_01580 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HCQ94_03630 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 01004 Lipid biosynthesis proteins [BR:actm01004] D HCQ94_02285 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HCQ94_02770 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:actm01006] D HCQ94_00945 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D HCQ94_02150 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCQ94_04885 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HCQ94_05580 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:actm01007] D HCQ94_04755 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCQ94_03550 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCQ94_04425 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HCQ94_00235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HCQ94_01935 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCQ94_00810 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HCQ94_03600 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HCQ94_02290 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HCQ94_01390 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCQ94_01045 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HCQ94_02980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCQ94_02160 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCQ94_05795 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HCQ94_02575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HCQ94_02065 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HCQ94_02605 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCQ94_03310 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HCQ94_03305 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HCQ94_05380 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HCQ94_04790 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:actm00194] D HCQ94_02010 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HCQ94_02005 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HCQ94_02000 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HCQ94_01985 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HCQ94_01980 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:actm03000] D HCQ94_04555 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCQ94_01280 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D HCQ94_02155 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HCQ94_01640 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D HCQ94_05985 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HCQ94_04930 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D HCQ94_03350 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D HCQ94_01125 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D HCQ94_04375 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D HCQ94_04545 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HCQ94_02225 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HCQ94_06160 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCQ94_03555 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D HCQ94_01890 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D HCQ94_01505 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D HCQ94_01535 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:actm03021] D HCQ94_00720 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HCQ94_00535 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HCQ94_00540 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HCQ94_02645 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HCQ94_02795 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D HCQ94_01425 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCQ94_05005 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HCQ94_02635 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HCQ94_05365 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HCQ94_00940 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D HCQ94_01945 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:actm03019] D HCQ94_01730 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HCQ94_01700 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HCQ94_04950 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HCQ94_03420 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D HCQ94_03400 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HCQ94_00885 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCQ94_04960 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HCQ94_01945 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HCQ94_01265 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCQ94_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCQ94_06060 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D HCQ94_03995 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:actm03011] D HCQ94_02320 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HCQ94_02335 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HCQ94_00615 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HCQ94_02590 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HCQ94_00670 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HCQ94_06050 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HCQ94_00560 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HCQ94_00655 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HCQ94_00740 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HCQ94_00580 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HCQ94_00715 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HCQ94_00555 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HCQ94_00710 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HCQ94_00650 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HCQ94_04965 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HCQ94_04035 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HCQ94_00630 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HCQ94_06040 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HCQ94_00605 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HCQ94_01870 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HCQ94_05355 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HCQ94_00600 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HCQ94_00585 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HCQ94_00590 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HCQ94_00645 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HCQ94_00660 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HCQ94_06035 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HCQ94_05340 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HCQ94_05360 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HCQ94_05335 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HCQ94_00735 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HCQ94_00635 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HCQ94_00680 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HCQ94_00620 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HCQ94_00725 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HCQ94_00665 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HCQ94_04015 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HCQ94_04625 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HCQ94_01735 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HCQ94_00610 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HCQ94_00595 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HCQ94_00640 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HCQ94_01740 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HCQ94_01665 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HCQ94_00625 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HCQ94_00675 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HCQ94_01950 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HCQ94_01930 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HCQ94_05400 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HCQ94_06210 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HCQ94_04630 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HCQ94_00705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HCQ94_01250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HCQ94_01255 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:actm03009] D HCQ94_01700 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HCQ94_03420 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D HCQ94_01915 era; GTPase Era K03595 era; GTPase D HCQ94_01745 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D HCQ94_05005 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HCQ94_02635 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HCQ94_05365 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HCQ94_00825 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HCQ94_02665 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HCQ94_01540 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HCQ94_00805 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HCQ94_03855 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HCQ94_00240 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HCQ94_02545 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HCQ94_03270 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D HCQ94_03020 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HCQ94_01625 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HCQ94_01730 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HCQ94_02610 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HCQ94_03400 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HCQ94_01415 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HCQ94_03025 der; bifunctional cytidylate kinase/GTPase Der K03977 engA; GTPase D HCQ94_01965 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HCQ94_03435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HCQ94_04990 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D HCQ94_01635 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D HCQ94_01765 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D HCQ94_01905 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D HCQ94_00970 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:actm03016] D HCQ94_04755 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCQ94_02575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HCQ94_03600 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HCQ94_01390 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCQ94_00810 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HCQ94_01935 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCQ94_01045 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HCQ94_02980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCQ94_02605 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCQ94_02160 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCQ94_02065 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HCQ94_05795 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HCQ94_00235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HCQ94_02290 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HCQ94_03310 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HCQ94_03305 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HCQ94_03550 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCQ94_04425 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HCQ94_00330 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D HCQ94_04370 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HCQ94_03620 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D HCQ94_04975 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HCQ94_01965 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HCQ94_04885 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HCQ94_02515 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D HCQ94_02240 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D HCQ94_01445 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D HCQ94_05710 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HCQ94_04900 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HCQ94_04090 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D HCQ94_04400 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HCQ94_02365 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HCQ94_01340 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HCQ94_01310 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HCQ94_04960 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:actm03012] D HCQ94_04995 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HCQ94_04635 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HCQ94_02340 elongation factor Ts K02357 tsf; elongation factor Ts D HCQ94_00570 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HCQ94_00565 fusA; elongation factor G K02355 fusA; elongation factor G D HCQ94_01955 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HCQ94_02535 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D HCQ94_00875 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HCQ94_00700 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HCQ94_02630 efp; elongation factor P K02356 efp; elongation factor P D HCQ94_05125 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:actm03110] D HCQ94_01290 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HCQ94_00335 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D HCQ94_03685 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HCQ94_01265 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCQ94_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCQ94_01275 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D HCQ94_01895 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HCQ94_01350 groES; co-chaperone GroES K04078 groES; chaperonin GroES D HCQ94_05660 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HCQ94_01980 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HCQ94_00065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D HCQ94_06145 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:actm04131] D HCQ94_03585 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HCQ94_03980 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCQ94_00210 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCQ94_02300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCQ94_00220 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:actm04121] D HCQ94_00445 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:actm03051] D HCQ94_00435 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D HCQ94_00450 proteasome accessory factor PafA2 family protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D HCQ94_00440 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:actm03032] D HCQ94_04555 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCQ94_04215 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HCQ94_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HCQ94_06095 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HCQ94_06045 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCQ94_01630 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCQ94_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCQ94_05880 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HCQ94_01385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HCQ94_04005 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HCQ94_02315 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCQ94_04845 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HCQ94_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCQ94_02815 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCQ94_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCQ94_02800 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCQ94_05890 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:actm03036] D HCQ94_04555 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCQ94_01700 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HCQ94_04215 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HCQ94_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HCQ94_04365 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D HCQ94_05120 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HCQ94_04940 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HCQ94_05115 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HCQ94_01595 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HCQ94_01605 cell division protein SepF K09772 sepF; cell division inhibitor SepF D HCQ94_03015 ParA family protein K03496 parA; chromosome partitioning protein D HCQ94_06165 ParA family protein K03496 parA; chromosome partitioning protein D HCQ94_06160 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCQ94_03000 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D HCQ94_03760 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D HCQ94_01085 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HCQ94_03985 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:actm03400] D HCQ94_02460 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D HCQ94_05250 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HCQ94_00265 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HCQ94_04060 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HCQ94_01010 endonuclease/exonuclease/phosphatase family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HCQ94_04845 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HCQ94_02315 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCQ94_02690 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HCQ94_03490 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HCQ94_02695 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HCQ94_02525 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCQ94_04480 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCQ94_00535 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HCQ94_00540 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HCQ94_00720 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HCQ94_02645 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HCQ94_00880 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HCQ94_00960 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HCQ94_01630 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCQ94_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCQ94_05880 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HCQ94_01385 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HCQ94_06045 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCQ94_04915 recA; recombinase RecA K03553 recA; recombination protein RecA D HCQ94_03465 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HCQ94_03460 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HCQ94_03470 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HCQ94_05620 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HCQ94_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HCQ94_03150 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HCQ94_01925 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HCQ94_00390 recR; recombination protein RecR K06187 recR; recombination protein RecR D HCQ94_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCQ94_02815 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCQ94_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCQ94_02800 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCQ94_05890 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HCQ94_04215 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HCQ94_01495 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HCQ94_00120 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HCQ94_00125 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:actm03029] D HCQ94_04995 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HCQ94_04635 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HCQ94_02340 elongation factor Ts K02357 tsf; elongation factor Ts D HCQ94_00570 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HCQ94_00565 fusA; elongation factor G K02355 fusA; elongation factor G D HCQ94_01915 era; GTPase Era K03595 era; GTPase D HCQ94_03550 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCQ94_01390 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCQ94_02980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCQ94_02160 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCQ94_01935 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCQ94_04830 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HCQ94_04825 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HCQ94_04835 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HCQ94_06045 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCQ94_01265 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCQ94_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCQ94_01350 groES; co-chaperone GroES K04078 groES; chaperonin GroES D HCQ94_01275 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D HCQ94_01895 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HCQ94_01085 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:actm02000] D HCQ94_02950 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HCQ94_02955 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HCQ94_00845 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D HCQ94_00425 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D HCQ94_03145 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D HCQ94_03140 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HCQ94_05295 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCQ94_04285 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D HCQ94_05715 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D HCQ94_05720 ABC transporter permease K02072 metI; D-methionine transport system permease protein D HCQ94_05725 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D HCQ94_03770 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D HCQ94_02430 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D HCQ94_03775 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D HCQ94_02435 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D HCQ94_03780 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D HCQ94_00975 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00980 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCQ94_00985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCQ94_00990 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCQ94_00995 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCQ94_05865 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D HCQ94_05860 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D HCQ94_05855 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D HCQ94_05330 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HCQ94_04220 anchored repeat-type ABC transporter permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein D HCQ94_04225 anchored repeat-type ABC transporter ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D HCQ94_05075 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component D HCQ94_05065 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HCQ94_05070 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HCQ94_01840 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D HCQ94_01835 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D HCQ94_05735 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein D HCQ94_05115 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HCQ94_05120 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HCQ94_03180 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HCQ94_01225 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCQ94_02215 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCQ94_03185 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCQ94_03325 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCQ94_04210 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCQ94_03220 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HCQ94_03215 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCQ94_02485 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D HCQ94_04510 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCQ94_05530 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D HCQ94_00220 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D HCQ94_00750 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D HCQ94_01455 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HCQ94_02370 amino acid permease K11733 lysP; lysine-specific permease D HCQ94_00910 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D HCQ94_02850 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HCQ94_02855 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HCQ94_05600 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HCQ94_01480 cytosine permease K10974 codB; cytosine permease D HCQ94_01110 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D HCQ94_06090 chloride channel protein K03281 clcA; chloride channel protein, CIC family D HCQ94_03515 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D HCQ94_03510 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D HCQ94_02360 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D HCQ94_05840 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein D HCQ94_03100 EfeM/EfeO family lipoprotein K07224 efeO; iron uptake system component EfeO D HCQ94_03095 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] C 02044 Secretion system [BR:actm02044] D HCQ94_02740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCQ94_03450 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HCQ94_05370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HCQ94_03445 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HCQ94_03965 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCQ94_00685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HCQ94_04045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCQ94_04050 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCQ94_03080 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HCQ94_03085 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:actm02042] D HCQ94_01455 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:actm02022] D HCQ94_02725 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D HCQ94_05745 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D HCQ94_03175 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HCQ94_03170 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D HCQ94_02310 response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:actm04812] D HCQ94_01595 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HCQ94_03015 ParA family protein K03496 parA; chromosome partitioning protein D HCQ94_06165 ParA family protein K03496 parA; chromosome partitioning protein D HCQ94_06160 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:actm04147] D HCQ94_00885 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCQ94_03980 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCQ94_03975 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HCQ94_02300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCQ94_00065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D HCQ94_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCQ94_01265 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCQ94_03765 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCQ94_01355 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HCQ94_00570 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HCQ94_04370 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HCQ94_02285 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HCQ94_00690 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HCQ94_03440 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HCQ94_05215 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HCQ94_02500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCQ94_03930 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HCQ94_04105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCQ94_03970 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCQ94_00210 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:actm02048] D HCQ94_02380 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D HCQ94_04555 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCQ94_01595 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HCQ94_04755 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:actm04052] D HCQ94_05535 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:actm03100] D HCQ94_01775 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCQ94_00045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCQ94_05750 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_01140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_02230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_04870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCQ94_05035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCQ94_00255 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HCQ94_02050 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HCQ94_04750 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HCQ94_00250 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCQ94_04735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCQ94_02045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCQ94_02120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCQ94_03710 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCQ94_04665 tRNA-His K14226 tRNA-His; tRNA His D HCQ94_00040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCQ94_00915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_04395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_04085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_02305 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCQ94_00290 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCQ94_04385 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCQ94_05405 tRNA-Met K14230 tRNA-Met; tRNA Met D HCQ94_02505 tRNA-Met K14230 tRNA-Met; tRNA Met D HCQ94_05060 tRNA-Ile K14230 tRNA-Met; tRNA Met D HCQ94_00260 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HCQ94_03705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCQ94_05960 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCQ94_00375 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCQ94_05700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCQ94_05760 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCQ94_06100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCQ94_05280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCQ94_05410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCQ94_05375 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HCQ94_05415 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HCQ94_03895 tRNA-Val K14237 tRNA-Val; tRNA Val D HCQ94_02055 tRNA-Val K14237 tRNA-Val; tRNA Val D HCQ94_02125 tRNA-Val K14237 tRNA-Val; tRNA Val D HCQ94_01250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HCQ94_01255 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HCQ94_03125 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D HCQ94_00300 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D HCQ94_03915 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HCQ94_05440 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D HCQ94_06175 arsenate reductase family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D HCQ94_05630 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D HCQ94_01770 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D HCQ94_00815 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HCQ94_02025 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D HCQ94_02580 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HCQ94_02705 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D HCQ94_02495 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D HCQ94_04415 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism D HCQ94_00115 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D HCQ94_01095 cold shock domain-containing protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D HCQ94_03700 trigger factor K03545 tig; trigger factor D HCQ94_05110 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D HCQ94_00110 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH C 99976 Replication and repair D HCQ94_01410 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D HCQ94_02585 replication-associated recombination protein A K07478 ycaJ; putative ATPase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HCQ94_04525 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D HCQ94_00305 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D HCQ94_01850 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HCQ94_05255 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HCQ94_04770 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HCQ94_04775 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HCQ94_04780 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HCQ94_03500 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D HCQ94_06190 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D HCQ94_04275 typA; translational GTPase TypA K06207 typA; GTP-binding protein D HCQ94_05425 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D HCQ94_02470 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D HCQ94_02475 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D HCQ94_06020 VTT domain-containing protein K03975 dedA; membrane-associated protein C 99997 Function unknown D HCQ94_02915 alpha/beta hydrolase K06889 K06889; uncharacterized protein D HCQ94_04030 RNA-binding protein K06960 K06960; uncharacterized protein D HCQ94_04815 ATP-binding protein K07133 K07133; uncharacterized protein D HCQ94_06200 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D HCQ94_00895 DUF501 domain-containing protein K09009 K09009; uncharacterized protein D HCQ94_02180 UPF0182 family protein K09118 K09118; uncharacterized protein D HCQ94_01485 DUF917 domain-containing protein K09703 K09703; uncharacterized protein D HCQ94_02080 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D HCQ94_00310 DUF47 family protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 24, 2024