+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Actinobaculum sp. 313</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
C    DDD63_01045 cas1e; type I-E CRISPR-associated endonuclease Cas1	K15342 cas1; CRISP-associated protein Cas1 
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
D      DDD63_01070 casA; type I-E CRISPR-associated protein Cse1/CasA	K19123 casA; CRISPR system Cascade subunit CasA 
D      DDD63_01065 casB; type I-E CRISPR-associated protein Cse2/CasB	K19046 casB; CRISPR system Cascade subunit CasB 
D      DDD63_01060 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC	K19124 casC; CRISPR system Cascade subunit CasC 
D      DDD63_01050 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE	K19126 casE; CRISPR system Cascade subunit CasE 
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    DDD63_04185 hypothetical protein	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] 
C    DDD63_02795 hypothetical protein	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
C    DDD63_02800 hypothetical protein	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
C    DDD63_04180 N-6 DNA methylase	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      DDD63_11785 SAM-dependent methyltransferase	K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] 
D      DDD63_01985 DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
C    DDD63_01990 restriction endonuclease	K07448 mrr; restriction system protein 
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
C    YafQ-dinJ
D      DDD63_02900 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] 
C    YoeB-YefM
C    HipA-HipB
D      DDD63_09690 toxin HipA	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] 
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
C    PspC-PspB
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
D      DDD63_02890 prevent-host-death protein	K19165 phd; antitoxin Phd 
C    HigB-HigA
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
D      DDD63_02815 VapC toxin family PIN domain ribonuclease	K07062 fitB; toxin FitB [EC:3.1.-.-] 
C    BC_0920-BC_0921
C    Type II TA system related factors
D      DDD63_10710 tRNA glutamyl-Q(34) synthetase GluQRS	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
D      DDD63_04855 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023