+D GENES KO
#
KEGG Orthology (KO) - Acidithiobacillus ferrivorans
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:afi00010]
D Acife_0310 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Acife_0223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_0784 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_2015 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Acife_2855 Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Acife_0189 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Acife_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_3131 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_2018 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_0795 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_2556 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Acife_0187 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0805 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0186 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Acife_0804 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Acife_0964 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Acife_2010 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Acife_0793 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1359 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_0185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_0794 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_2148 Pyruvate kinase barrel K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Acife_0801 dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3082 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3081 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0800 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0799 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_2011 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2337 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Acife_1356 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:afi00020]
D Acife_3078 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D Acife_0626 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Acife_0627 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_0630 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Acife_0628 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Acife_0585 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Acife_0801 dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3082 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3081 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0800 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0799 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_2011 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:afi00030]
D Acife_0223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_0784 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_0694 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Acife_1368 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Acife_0317 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Acife_1369 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Acife_0183 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Acife_0188 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Acife_0785 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Acife_0622 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Acife_1013 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Acife_0337 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Acife_0544 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Acife_3156 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Acife_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_3131 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_2018 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_0795 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_2855 Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Acife_0189 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Acife_2015 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:afi00040]
D Acife_1003 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1754 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_0680 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1324 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_0183 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Acife_2585 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:afi00051]
D Acife_1676 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Acife_1155 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Acife_1814 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Acife_1158 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Acife_2585 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Acife_2015 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Acife_2855 Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Acife_0189 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Acife_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_3131 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_2018 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_0795 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_2556 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Acife_2355 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Acife_1159 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Acife_2898 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:afi00052]
D Acife_1178 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_3228 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_3230 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_1056 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_0680 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1324 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Acife_0310 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Acife_2015 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:afi00053]
D Acife_1003 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1754 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1710 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Acife_0994 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:afi00500]
D Acife_1677 sucrose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D Acife_1678 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
D Acife_0680 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1324 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1323 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Acife_1594 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Acife_1586 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Acife_1177 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Acife_0313 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Acife_0580 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Acife_0314 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Acife_0965 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Acife_2020 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Acife_0606 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Acife_3157 Glucodextranase N K01178 SGA1; glucoamylase [EC:3.2.1.3]
D Acife_0609 malto-oligosyltrehalose synthase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Acife_0311 Domain of unknown function DUF1926 K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Acife_0607 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Acife_0608 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Acife_0310 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Acife_0223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_0784 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_1676 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:afi00520]
D Acife_0325 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Acife_1676 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Acife_3187 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Acife_2557 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Acife_3188 Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Acife_2863 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Acife_2002 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D Acife_2912 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Acife_2911 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Acife_2918 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Acife_2821 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Acife_0310 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Acife_0680 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1324 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1003 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1754 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1178 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_3228 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_3230 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_1056 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_1710 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Acife_0994 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Acife_2898 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Acife_0223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_0784 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_1814 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Acife_1155 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Acife_1158 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Acife_2355 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Acife_1159 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Acife_1666 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Acife_1177 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Acife_1176 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Acife_1175 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Acife_2067 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Acife_2776 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Acife_0313 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:afi00620]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Acife_0801 dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3082 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3081 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0800 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0799 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_2011 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2337 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Acife_1356 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Acife_2012 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Acife_0185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_0794 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_2148 Pyruvate kinase barrel K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_1314 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Acife_2829 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Acife_2830 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Acife_2196 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Acife_0792 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Acife_2342 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Acife_2640 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Acife_2644 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Acife_1027 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Acife_1343 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Acife_1130 NAD-binding malic protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Acife_0585 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Acife_1420 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Acife_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Acife_2526 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Acife_1686 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Acife_1634 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:afi00630]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Acife_3078 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D Acife_0626 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Acife_3212 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Acife_3211 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Acife_3210 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Acife_2431 Catalase related subgroup domain-containing protein K03781 katE; catalase [EC:1.11.1.6]
D Acife_0182 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Acife_1242 Ribulose bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Acife_2232 Ribulose bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Acife_3145 Ribulose bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Acife_2231 ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Acife_3144 ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Acife_0856 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2341 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2736 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Acife_1786 Glycine cleavage system P-protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Acife_1785 Glycine cleavage system P-protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Acife_1788 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_2470 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Acife_1787 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2070 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2468 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:afi00640]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Acife_2012 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1314 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Acife_2829 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Acife_2830 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Acife_2196 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Acife_0628 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Acife_0630 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:afi00650]
D Acife_2615 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Acife_1672 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Acife_2153 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Acife_2152 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:afi00660]
D Acife_2153 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Acife_2152 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Acife_0628 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Acife_0630 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Acife_1009 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Acife_1010 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Acife_2203 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:afi00562]
D Acife_0190 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Acife_1095 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Acife_2556 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:afi00190]
D Acife_2554 NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Acife_2553 NAD(P)H-quinone oxidoreductase subunit K K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Acife_2552 NAD(P)H-quinone oxidoreductase subunit J K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Acife_2551 NAD(P)H-quinone oxidoreductase subunit H K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Acife_2550 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Acife_2549 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Acife_2548 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Acife_2547 NAD(P)H-quinone oxidoreductase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Acife_2546 NAD(P)H-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Acife_2545 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Acife_2544 NAD(P)H-quinone oxidoreductase subunit 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Acife_2543 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Acife_2542 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Acife_2541 NAD(P)H-quinone oxidoreductase subunit 2 K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Acife_0615 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Acife_3269 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Acife_0614 Cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Acife_3268 Cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Acife_0613 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Acife_3267 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Acife_1020 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_1862 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_1018 cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D Acife_1031 cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D Acife_1867 cytochrome c oxidase, aa3-type, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Acife_1868 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Acife_1869 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Acife_1017 cytochrome c oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Acife_1030 cytochrome c oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Acife_2595 cytochrome c oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Acife_1016 cytochrome c oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Acife_1029 cytochrome c oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Acife_2596 cytochrome c oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Acife_1015 cytochrome c oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Acife_1028 cytochrome c oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Acife_2597 cytochrome c oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Acife_3192 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Acife_3190 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Acife_3191 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Acife_3193 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Acife_1606 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Acife_3189 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Acife_3196 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Acife_3194 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Acife_3195 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Acife_0797 plasma-membrane proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D Acife_3093 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D Acife_0938 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Acife_1413 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Acife_0803 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Acife_1429 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:afi00710]
D Acife_1242 Ribulose bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Acife_2232 Ribulose bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Acife_3145 Ribulose bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Acife_2231 ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Acife_3144 ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Acife_0186 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Acife_0804 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Acife_0187 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0805 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_3131 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_2855 Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Acife_0189 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Acife_0188 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Acife_1013 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Acife_0973 phosphoribulokinase/uridine kinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Acife_2556 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Acife_0183 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Acife_0785 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Acife_0622 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Acife_1420 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Acife_1130 NAD-binding malic protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Other carbon fixation pathways [PATH:afi00720]
D Acife_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Acife_1420 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Acife_0585 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Acife_0630 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Acife_0628 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Acife_0627 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Acife_0626 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Acife_1314 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Acife_2829 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Acife_2830 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Acife_2196 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Acife_1414 Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Acife_0972 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Acife_2012 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:afi00680]
D Acife_0709 S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_0707 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D Acife_1111 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D Acife_2736 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Acife_0793 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1359 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1420 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Acife_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_3131 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Acife_2018 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_0795 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_2855 Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Acife_0189 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Acife_2015 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Acife_2474 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Acife_2519 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Acife_2471 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Acife_2475 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Acife_2476 iron-sulfur cluster-binding protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Acife_2472 iron-sulfur cluster-binding protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Acife_2012 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Acife_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Acife_0964 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Acife_2010 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Acife_1388 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Acife_2669 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:afi00910]
D Acife_1461 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Acife_2074 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Acife_1460 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1459 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1457 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Acife_2078 molybdopterin oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D Acife_2076 nitrite reductase (NAD(P)H), large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D Acife_2077 nitrite reductase (NAD(P)H), small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D Acife_1649 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Acife_1648 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Acife_1650 Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Acife_0574 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Acife_3273 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Acife_0856 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2341 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2167 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Acife_2168 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Acife_2743 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:afi00920]
D Acife_0064 ABC transporter sulfonate/nitrate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Acife_0063 ABC-type transporter, integral membrane subunit K15554 ssuC; sulfonate transport system permease protein
D Acife_0062 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Acife_2629 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Acife_2628 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Acife_2287 Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Acife_2627 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Acife_2483 molybdopterin oxidoreductase Fe4S4 region K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D Acife_2482 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D Acife_2481 DMSO reductase anchor subunit (DmsC) K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D Acife_2490 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D Acife_2491 sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Acife_2494 5'-Nucleotidase domain-containing protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Acife_2625 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Acife_2626 Sulfite reductase (NADPH) hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Acife_0889 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Acife_0494 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Acife_2028 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Acife_2600 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Acife_2633 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Acife_2601 sulfur oxygenase reductase K16952 sor; sulfur oxygenase/reductase [EC:1.13.11.55]
D Acife_0620 metallo-beta-lactamase family protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D Acife_1384 TQO small subunit DoxD domain-containing protein K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2]
D Acife_1097 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Acife_1633 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Acife_2738 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Acife_2192 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Acife_1627 Rieske (2Fe-2S) iron-sulfur domain-containing protein K15762 tmoC; toluene monooxygenase system ferredoxin subunit
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:afi00061]
D Acife_1314 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Acife_2829 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Acife_2830 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Acife_2196 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Acife_0487 Acyl carrier protein K02078 acpP; acyl carrier protein
D Acife_1444 Acyl carrier protein K02078 acpP; acyl carrier protein
D Acife_2847 acyl carrier protein, putative K02078 acpP; acyl carrier protein
D Acife_1442 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Acife_1441 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Acife_2846 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Acife_1445 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Acife_1443 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_2843 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_1307 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Acife_0623 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Acife_2807 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:afi00071]
D Acife_2807 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:afi00561]
D Acife_2337 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Acife_1356 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Acife_1440 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Acife_0034 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Acife_0145 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Acife_2516 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Acife_1706 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:afi00564]
D Acife_1268 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Acife_0034 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Acife_0145 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Acife_2516 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Acife_0569 Methyltransferase type 11 K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D Acife_0980 phosphatidylethanolamine N-methyltransferase, putative K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D Acife_1301 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Acife_2149 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Acife_2150 Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Acife_1364 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Acife_1834 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Acife_2616 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Acife_2087 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Acife_2752 phospholipase D/transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Acife_1435 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Acife_2465 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D Acife_1273 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D Acife_0267 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:afi00230]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Acife_0544 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Acife_2193 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Acife_1071 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Acife_1432 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Acife_1370 Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D Acife_2406 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Acife_1433 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Acife_2757 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Acife_2758 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Acife_2407 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Acife_2408 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Acife_1072 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Acife_2286 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Acife_2639 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Acife_0635 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Acife_2673 phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Acife_2040 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Acife_1511 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Acife_2388 Nucleoside-triphosphatase rdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Acife_0651 FAD-binding molybdopterin dehydrogenase K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D Acife_2039 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Acife_2451 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Acife_0646 amidohydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D Acife_2225 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Acife_2561 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Acife_2562 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Acife_3280 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Acife_2166 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D Acife_0751 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Acife_2223 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Acife_1293 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Acife_1426 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Acife_0968 PfkB domain protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D Acife_0647 Adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D Acife_2689 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Acife_1225 metallophosphoesterase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D Acife_2629 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Acife_2628 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Acife_2287 Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Acife_0652 hypothetical protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D Acife_0659 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:afi00240]
D Acife_1024 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Acife_1025 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Acife_2940 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Acife_0448 hypothetical protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Acife_1316 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Acife_1880 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Acife_2939 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Acife_1068 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Acife_1399 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Acife_1398 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Acife_1298 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Acife_1511 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Acife_0089 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Acife_1357 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Acife_1394 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Acife_2639 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Acife_2941 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Acife_0663 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Acife_3280 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Acife_0597 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Acife_2561 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Acife_2562 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Acife_0751 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Acife_1448 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Acife_2681 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Acife_2165 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:afi00250]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_1766 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Acife_2638 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Acife_0220 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Acife_1426 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Acife_2408 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Acife_2940 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Acife_2615 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Acife_1672 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Acife_2167 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Acife_2168 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Acife_0856 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2341 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_1024 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Acife_1025 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Acife_3187 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Acife_2193 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:afi00260]
D Acife_2635 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Acife_2202 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Acife_0865 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Acife_3102 Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Acife_0866 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Acife_2736 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Acife_0964 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Acife_2010 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Acife_1388 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Acife_2669 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Acife_1622 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Acife_1786 Glycine cleavage system P-protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Acife_1785 Glycine cleavage system P-protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Acife_1788 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_2470 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Acife_1787 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2070 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2468 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2149 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Acife_2175 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Acife_2197 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Acife_1474 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Acife_2198 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:afi00270]
D Acife_1097 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Acife_1633 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Acife_2789 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Acife_2742 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Acife_0970 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Acife_2887 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Acife_1238 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D Acife_2888 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Acife_0666 hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Acife_0664 hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Acife_1271 hopanoid-associated phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Acife_0635 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Acife_2000 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Acife_2672 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Acife_1386 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Acife_0639 Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D Acife_0637 ribulose bisphosphate carboxylase large chain K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D Acife_0638 Haloacid dehalogenase domain protein hydrolase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D Acife_0636 Acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D Acife_0971 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Acife_2635 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Acife_2202 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Acife_0865 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Acife_2738 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Acife_2192 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Acife_2277 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Acife_3077 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Acife_3076 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_0318 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Acife_1388 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:afi00280]
D Acife_2277 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:afi00290]
D Acife_2175 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Acife_1009 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Acife_1010 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Acife_2203 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Acife_2153 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Acife_2152 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Acife_2151 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Acife_1132 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Acife_1881 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Acife_2277 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Acife_2526 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Acife_1686 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:afi00300]
D Acife_0865 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Acife_2635 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Acife_2202 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Acife_2410 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Acife_0594 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Acife_2005 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Acife_2636 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Acife_2004 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Acife_2006 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Acife_0566 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Acife_0222 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Acife_2814 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Acife_2815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:afi00310]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1672 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Acife_2176 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase
C 00220 Arginine biosynthesis [PATH:afi00220]
D Acife_2637 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Acife_2638 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Acife_0220 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Acife_0856 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2341 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_1024 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Acife_1025 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_1134 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Acife_2802 Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Acife_2771 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Acife_3085 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Acife_2636 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:afi00330]
D Acife_2340 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Acife_1612 Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Acife_2447 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Acife_1238 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D Acife_2888 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Acife_2887 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Acife_1622 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Acife_2765 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Acife_2038 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Acife_2748 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Acife_0689 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Acife_1859 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:afi00340]
D Acife_2919 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Acife_1425 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Acife_2926 Histidine biosynthesis bifunctional protein hisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Acife_2924 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Acife_2923 Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Acife_2925 Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Acife_2922 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Acife_1485 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1390 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2921 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2311 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Acife_2920 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Acife_1622 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:afi00350]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_1485 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1390 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2921 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1622 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_1672 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Acife_1614 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:afi00360]
D Acife_1622 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_1485 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1390 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2921 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:afi00380]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1622 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Acife_2431 Catalase related subgroup domain-containing protein K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:afi00400]
D Acife_0586 DAHP synthetase I/KDSA K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Acife_1391 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Acife_2164 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D Acife_2018 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_0795 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Acife_2828 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Acife_2862 Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Acife_2163 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Acife_1393 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Acife_1703 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Acife_0181 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Acife_0176 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Acife_0175 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Acife_2199 N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Acife_0174 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Acife_2197 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Acife_1474 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Acife_2198 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Acife_1389 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Acife_1392 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_1485 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1390 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2921 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2838 dioxygenase, putative K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:afi00410]
D Acife_3095 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Acife_2615 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Acife_2047 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:afi00430]
D Acife_2615 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Acife_2012 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D Acife_1771 metallo-beta-lactamase family protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:afi00450]
D Acife_2789 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Acife_2742 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Acife_2660 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Acife_2629 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Acife_2628 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Acife_2287 Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Acife_0587 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Acife_2736 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:afi00470]
D Acife_0331 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Acife_2822 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Acife_0309 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Acife_2817 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Acife_0566 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Acife_0222 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:afi00480]
D Acife_3077 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Acife_3076 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Acife_1217 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Acife_1409 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Acife_0225 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Acife_2740 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Acife_2867 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Acife_2671 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Acife_0627 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Acife_1369 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Acife_0694 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Acife_1368 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Acife_2670 glutaredoxin domain protein region K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D Acife_1238 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D Acife_2888 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:afi00540]
D Acife_1308 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Acife_2805 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Acife_1306 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Acife_1691 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Acife_1311 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Acife_0935 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Acife_2908 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Acife_1358 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Acife_2907 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Acife_0937 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Acife_2791 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Acife_0117 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Acife_2790 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Acife_2769 Lipid A 3-O-deacylase-related protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Acife_1753 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Acife_2515 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Acife_1709 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Acife_2793 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Acife_0075 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Acife_2795 O-antigen polymerase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:afi00541]
D Acife_0680 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1324 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Acife_1178 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_3228 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_3230 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_1056 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Acife_1003 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1754 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Acife_1710 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Acife_0994 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Acife_3253 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Acife_3250 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Acife_1174 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Acife_3252 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Acife_3251 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Acife_1177 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Acife_1176 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Acife_1175 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Acife_2067 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Acife_2776 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Acife_1155 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Acife_1814 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Acife_1158 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Acife_2355 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Acife_1159 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Acife_1666 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Acife_3188 Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:afi00550]
D Acife_2918 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Acife_2821 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Acife_2820 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Acife_2817 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Acife_2814 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Acife_2822 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Acife_2815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Acife_1300 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_1329 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_2099 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_1022 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Acife_2816 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Acife_2819 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Acife_1089 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Acife_1253 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Acife_0261 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_2813 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_0224 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2500 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2396 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:afi00552]
D Acife_1022 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Acife_1706 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:afi00543]
D Acife_1097 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Acife_1633 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:afi00730]
D Acife_1805 Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Acife_3263 Phosphomethylpyrimidine kinase type-1 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Acife_0492 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_0886 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1099 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1635 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1663 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1741 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Acife_1701 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Acife_1113 Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Acife_3262 Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Acife_1835 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Acife_2689 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:afi00740]
D Acife_2732 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Acife_2734 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Acife_2731 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Acife_2733 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Acife_2266 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Acife_1116 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:afi00750]
D Acife_1012 Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Acife_1388 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Acife_2879 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Acife_1756 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Acife_0866 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:afi00760]
D Acife_1766 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Acife_0146 Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Acife_1212 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Acife_0094 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Acife_0631 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Acife_1833 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Acife_0686 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Acife_1672 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:afi00770]
D Acife_2153 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Acife_2152 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Acife_2151 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Acife_1132 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Acife_1881 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Acife_2046 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Acife_2047 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Acife_0687 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Acife_2680 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Acife_0554 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Acife_2857 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Acife_1755 Holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Acife_2277 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Acife_3095 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:afi00780]
D Acife_2783 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Acife_2846 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Acife_1445 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Acife_1443 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_2843 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_1307 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Acife_0623 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Acife_2784 alpha/beta hydrolase fold containing protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Acife_2785 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Acife_1506 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Acife_2782 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Acife_2768 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Acife_0688 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:afi00785]
D Acife_2502 Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Acife_2503 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Acife_2467 Radical SAM domain protein K09711 lipS1; lipoyl synthase
D Acife_2464 Radical SAM domain protein K24689 lipS2; lipoyl synthase
D Acife_2466 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Acife_3277 protein of unknown function DUF116 K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_0801 dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3082 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Acife_3081 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0800 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Acife_0799 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_2011 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Acife_1786 Glycine cleavage system P-protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Acife_1785 Glycine cleavage system P-protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Acife_1788 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Acife_2470 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Acife_1787 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2070 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Acife_2468 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:afi00790]
D Acife_1702 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Acife_0033 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Acife_2044 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Acife_2558 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Acife_2195 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Acife_2732 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Acife_2262 para-aminobenzoate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Acife_1446 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Acife_2521 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Acife_0030 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D Acife_0134 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Acife_0135 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Acife_1602 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Acife_2480 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Acife_2485 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Acife_1790 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Acife_3204 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Acife_2207 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Acife_2205 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:afi00670]
D Acife_1414 Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Acife_2736 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Acife_1432 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Acife_1072 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Acife_0016 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Acife_1788 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Acife_2165 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Acife_0972 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Acife_1256 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:afi00860]
D Acife_0625 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Acife_0548 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Acife_3261 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Acife_3256 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Acife_3258 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Acife_3257 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Acife_2169 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Acife_1069 Coproporphyrinogen-III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Acife_0072 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Acife_2218 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D Acife_2865 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Acife_2630 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Acife_2080 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Acife_1020 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_1862 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_2081 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Acife_2993 ATPase associated with various cellular activities AAA_5 K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D Acife_0354 FMN-binding pyridoxamine 5'-phosphate oxidase-related protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Acife_2243 FMN-binding pyridoxamine 5'-phosphate oxidase-related protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Acife_3137 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:afi00130]
D Acife_0979 Chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D Acife_2838 dioxygenase, putative K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D Acife_0978 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Acife_2422 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Acife_1116 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Acife_2428 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D Acife_2001 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Acife_2427 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Acife_2741 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Acife_0171 COQ7 family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D Acife_0226 Flavoprotein wrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:afi00900]
D Acife_1701 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Acife_1302 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Acife_2665 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Acife_0545 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Acife_2664 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Acife_1515 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Acife_0194 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Acife_1116 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Acife_1700 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Acife_0259 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Acife_1300 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_1329 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_2099 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:afi00909]
D Acife_1270 squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:afi00906]
D Acife_1269 Squalene/phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Acife_0188 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:afi00523]
D Acife_3253 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Acife_3250 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Acife_1174 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Acife_3252 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Acife_3251 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Acife_3250 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:afi00332]
D Acife_2038 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Acife_2748 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Acife_0689 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:afi00261]
D Acife_2629 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Acife_2628 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Acife_2287 Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Acife_2635 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Acife_2202 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Acife_2410 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Acife_0594 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:afi00521]
D Acife_0310 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Acife_1053 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Acife_0190 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Acife_1095 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Acife_3253 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Acife_3250 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Acife_1174 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Acife_3252 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Acife_3251 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Acife_0310 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:afi00525]
D Acife_3253 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Acife_3250 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:afi00401]
D Acife_1392 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_1485 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1390 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2921 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Acife_0181 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Acife_0176 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Acife_1442 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Acife_1443 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_2843 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_0623 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Acife_0487 Acyl carrier protein K02078 acpP; acyl carrier protein
D Acife_1444 Acyl carrier protein K02078 acpP; acyl carrier protein
D Acife_2847 acyl carrier protein, putative K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:afi00999]
D Acife_0970 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Acife_2862 Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:afi00362]
D Acife_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Acife_2587 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Acife_1104 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D Acife_1667 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
C 00627 Aminobenzoate degradation
D Acife_1116 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:afi00364]
D Acife_1209 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:afi00625]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_1648 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Acife_1650 Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Acife_1649 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:afi00361]
D Acife_1209 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Acife_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:afi00623]
D Acife_1627 Rieske (2Fe-2S) iron-sulfur domain-containing protein K15762 tmoC; toluene monooxygenase system ferredoxin subunit
D Acife_1209 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:afi00622]
D Acife_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D Acife_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation [PATH:afi00791]
D Acife_0653 ring-opening amidohydrolase K03383 atzD; cyanuric acid amidohydrolase [EC:3.5.2.15]
D Acife_0656 amidohydrolase, AtzE family K19837 atzE; 1-carboxybiuret hydrolase [EC:3.5.1.131]
C 00930 Caprolactam degradation
D Acife_1491 ThiJ/PfpI domain-containing protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:afi00626]
D Acife_0708 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Acife_2295 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:afi03020]
D Acife_2717 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Acife_2716 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Acife_2683 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Acife_2224 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:afi03010]
D Acife_1395 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Acife_1296 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Acife_2704 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Acife_2684 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Acife_2693 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Acife_0326 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Acife_2714 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Acife_2696 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Acife_3086 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Acife_2711 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Acife_2685 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Acife_2715 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Acife_2686 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Acife_2697 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Acife_2647 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Acife_0290 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Acife_2701 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Acife_0327 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Acife_2706 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Acife_1229 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Acife_2386 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Acife_2720 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Acife_2707 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Acife_2710 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Acife_2709 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Acife_2698 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Acife_2695 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Acife_2718 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Acife_0329 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Acife_2719 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Acife_2721 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Acife_3087 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Acife_2700 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Acife_2691 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Acife_2703 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Acife_2682 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Acife_2694 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Acife_0293 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Acife_2536 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Acife_2745 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Acife_2705 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Acife_2708 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Acife_2699 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Acife_1252 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Acife_2746 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Acife_0588 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Acife_2702 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Acife_2692 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Acife_1129 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Acife_1439 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Acife_0589 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Acife_0152 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Acife_2537 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Acife_2687 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Acife_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Acife_R0057 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Acife_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Acife_R0054 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Acife_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Acife_R0053 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:afi00970]
D Acife_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0036 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Acife_R0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Acife_R0018 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Acife_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Acife_R0007 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Acife_R0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Acife_R0037 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Acife_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Acife_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Acife_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Acife_R0005 tRNA-His K14226 tRNA-His; tRNA His
D Acife_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Acife_R0056 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Acife_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Acife_R0028 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Acife_R0003 tRNA-Met K14230 tRNA-Met; tRNA Met
D Acife_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D Acife_R0047 tRNA-Met K14230 tRNA-Met; tRNA Met
D Acife_R0002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Acife_R0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Acife_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Acife_R0010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Acife_R0012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Acife_R0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Acife_R0032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Acife_R0033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Acife_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Acife_R0021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Acife_R0048 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Acife_R0051 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Acife_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D Acife_R0022 tRNA-Val K14237 tRNA-Val; tRNA Val
D Acife_R0040 tRNA-Val K14237 tRNA-Val; tRNA Val
D Acife_0625 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Acife_1090 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Acife_1282 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Acife_1283 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Acife_1281 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Acife_1830 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Acife_0147 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Acife_2513 Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Acife_2514 Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Acife_2539 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Acife_2655 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Acife_1091 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Acife_0587 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Acife_0016 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Acife_1214 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Acife_0844 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Acife_2267 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Acife_0926 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Acife_2874 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Acife_1264 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Acife_1516 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Acife_2535 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Acife_2534 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Acife_3092 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Acife_2031 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:afi03060]
D Acife_2690 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Acife_2723 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Acife_2555 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Acife_2186 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Acife_2185 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Acife_2187 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Acife_0155 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Acife_2803 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Acife_1267 Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D Acife_0289 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Acife_R0026 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Acife_0556 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Acife_1530 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Acife_2927 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Acife_2928 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Acife_2929 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Acife_1761 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Acife_1494 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Acife_2268 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:afi04122]
D Acife_0492 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_0886 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1099 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1635 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1663 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_2478 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Acife_1106 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Acife_1790 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Acife_2480 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Acife_1791 thiamineS protein K03636 moaD; sulfur-carrier protein
D Acife_1122 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Acife_2485 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Acife_3204 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Acife_1112 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:afi03018]
D Acife_1235 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Acife_1092 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Acife_0793 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1359 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_2646 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Acife_1285 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Acife_1428 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Acife_0975 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Acife_1224 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Acife_1128 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Acife_0592 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Acife_2283 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Acife_1421 Protein hfq K03666 hfq; host factor-I protein
D Acife_1413 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Acife_0803 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Acife_1429 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Acife_2042 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:afi03030]
D Acife_2641 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Acife_1313 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Acife_1501 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Acife_1449 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Acife_0842 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Acife_1216 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Acife_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Acife_0330 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Acife_2383 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Acife_0300 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2988 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2642 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Acife_1312 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Acife_3099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Acife_1605 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:afi03410]
D Acife_0577 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Acife_2894 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Acife_0551 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Acife_0853 DNA-binding DNA glycosylase/AP lyase, H2TH K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Acife_0386 DNA repair protein and transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Acife_1681 DNA repair protein and transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Acife_0266 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Acife_2866 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Acife_2870 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Acife_3099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Acife_0873 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Acife_1605 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:afi03420]
D Acife_2666 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Acife_0299 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D Acife_1355 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D Acife_1363 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Acife_3104 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Acife_3099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Acife_1605 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:afi03430]
D Acife_2054 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D Acife_2384 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Acife_2154 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Acife_1509 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D Acife_3104 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Acife_1695 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Acife_1699 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Acife_2052 Exonuclease RNase T and DNA polymerase III K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D Acife_0873 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Acife_0300 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2988 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_1313 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Acife_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Acife_1501 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Acife_0842 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Acife_1449 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Acife_2641 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Acife_1216 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Acife_1605 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:afi03440]
D Acife_0873 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Acife_0300 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2988 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D Acife_1757 DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D Acife_1503 Recombination protein recR K06187 recR; recombination protein RecR
D Acife_1832 Protein recA K03553 recA; recombination protein RecA
D Acife_3099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Acife_0142 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D Acife_0141 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Acife_0143 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Acife_0178 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_0839 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_2220 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_2372 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_0112 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Acife_0113 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Acife_0111 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Acife_0728 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Acife_1313 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Acife_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Acife_1501 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Acife_0842 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Acife_1449 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Acife_2641 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Acife_1216 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Acife_0977 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:afi02010]
D Acife_1624 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Acife_1227 ABC-type transporter, integral membrane subunit K15496 wtpB; molybdate/tungstate transport system permease protein
D Acife_1228 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D Acife_0064 ABC transporter sulfonate/nitrate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Acife_0063 ABC-type transporter, integral membrane subunit K15554 ssuC; sulfonate transport system permease protein
D Acife_0062 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Acife_1348 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein
D Acife_2883 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Acife_1279 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein
D Acife_1261 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Acife_2884 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Acife_1118 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Acife_2885 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Acife_2882 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D Acife_1117 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Acife_2886 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Acife_1288 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Acife_1523 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Acife_1289 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Acife_1524 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Acife_1290 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Acife_1525 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Acife_1291 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Acife_3240 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Acife_0167 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D Acife_0168 ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Acife_0927 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Acife_0928 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Acife_1218 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Acife_1219 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Acife_2904 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Acife_0558 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Acife_0557 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Acife_1781 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Acife_2272 ABC transporter domain-containing protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:afi02060]
D Acife_2896 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Acife_2897 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Acife_2898 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Acife_2901 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:afi03070]
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
D Acife_2186 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Acife_2185 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Acife_2723 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Acife_2555 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Acife_2690 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Acife_2187 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Acife_0155 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Acife_2803 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Acife_0556 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Acife_1267 Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D Acife_0289 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Acife_2927 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Acife_2928 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Acife_2929 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Acife_1942 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1
D Acife_0719 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Acife_1990 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:afi02020]
D Acife_1287 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Acife_0101 transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Acife_1286 two component transcriptional regulator PhoB, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Acife_2126 transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Acife_1288 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Acife_1523 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Acife_0218 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_0054 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_1060 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_0217 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Acife_0053 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Acife_1059 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Acife_1763 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_0296 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_0199 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Acife_2137 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Acife_2136 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Acife_0502 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Acife_0469 heavy metal efflux system protein, putative K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Acife_0898 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Acife_0814 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Acife_0499 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_0811 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_0895 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_2146 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_0500 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_0812 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_0896 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_2147 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_1080 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Acife_1081 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Acife_1077 Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Acife_1076 Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Acife_1075 Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Acife_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D Acife_0851 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Acife_1460 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1459 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1457 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1458 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Acife_1712 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D Acife_0274 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Acife_0273 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Acife_0272 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Acife_0283 Type II secretion system F domain-containing protein K12510 tadB; tight adherence protein B
D Acife_0284 Type II secretion system F domain-containing protein K12511 tadC; tight adherence protein C
D Acife_1839 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Acife_0632 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Acife_0256 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Acife_0257 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Acife_0856 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2341 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_0019 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Acife_0020 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Acife_1654 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein
D Acife_2487 signal transduction histidine kinase, nitrogen specific, NtrB K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Acife_2860 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Acife_2859 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Acife_2903 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Acife_1557 pilin, putative K02650 pilA; type IV pilus assembly protein PilA
D Acife_1915 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Acife_1968 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Acife_1976 pilin, putative K02650 pilA; type IV pilus assembly protein PilA
D Acife_0684 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_2892 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_0682 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Acife_2890 putative two component, sigma54 specific, transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Acife_0501 cytochrome b561 K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Acife_0897 cytochrome b561 K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Acife_0813 cytochrome b561 K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Acife_1527 (Ni/Fe) hydrogenase, b-type cytochrome subunit, putative K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Acife_0022 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Acife_1591 multi-sensor hybrid histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Acife_1592 response regulator receiver modulated metal dependent phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D Acife_2390 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Acife_1590 Enoyl-CoA hydratase/isomerase K13816 rpfF; DSF synthase
D Acife_1857 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Acife_1858 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Acife_0615 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Acife_3269 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Acife_0614 Cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Acife_3268 Cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Acife_0613 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Acife_3267 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
D Acife_1181 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Acife_1180 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Acife_0615 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Acife_3269 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:afi02024]
D Acife_1421 Protein hfq K03666 hfq; host factor-I protein
D Acife_0181 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Acife_0176 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Acife_0684 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_2892 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_0682 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Acife_2890 putative two component, sigma54 specific, transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Acife_1081 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Acife_2615 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Acife_1909 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D Acife_1907 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D Acife_1906 hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D Acife_1904 CagE, TrbE, VirB component of type IV transporter system, conserved region K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D Acife_1899 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D Acife_1898 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D Acife_1897 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF
D Acife_1896 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG
D Acife_1894 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D Acife_2339 beta-lactamase-like protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D Acife_1590 Enoyl-CoA hydratase/isomerase K13816 rpfF; DSF synthase
D Acife_2807 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Acife_1591 multi-sensor hybrid histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Acife_1592 response regulator receiver modulated metal dependent phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D Acife_2390 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Acife_2734 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Acife_2139 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D Acife_0155 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Acife_2723 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Acife_2555 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Acife_2690 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Acife_2187 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Acife_2803 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Acife_0556 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Acife_1267 Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D Acife_0289 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D Acife_0022 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
C 02040 Flagellar assembly [PATH:afi02040]
D Acife_2382 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Acife_2903 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Acife_0793 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1359 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:afi01501]
D Acife_1745 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Acife_0325 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Acife_1416 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0051 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0050 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_1415 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
D Acife_1089 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Acife_1253 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Acife_0261 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_2813 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:afi01502]
D Acife_0851 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Acife_2822 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Acife_0331 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Acife_2815 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Acife_2816 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Acife_2819 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:afi01503]
D Acife_2412 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Acife_1763 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_0296 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_3044 thiol:disulfide interchange protein, DsbA family K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Acife_1416 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0051 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0050 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_1415 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
D Acife_1308 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:afi01000]
C 01001 Protein kinases [BR:afi01001]
D Acife_3185 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Acife_1499 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Acife_1180 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Acife_1287 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Acife_0218 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_0054 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_1060 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_2137 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Acife_1080 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Acife_2130 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Acife_0256 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Acife_0019 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Acife_2487 signal transduction histidine kinase, nitrogen specific, NtrB K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Acife_2860 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Acife_0684 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_2892 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_1591 multi-sensor hybrid histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Acife_1857 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:afi01009]
D Acife_0971 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Acife_1572 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Acife_3184 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Acife_2669 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:afi01002]
D Acife_1494 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Acife_2268 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Acife_2858 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Acife_1822 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Acife_2039 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Acife_2451 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Acife_2448 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Acife_2193 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Acife_2167 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Acife_3187 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Acife_0961 DJ-1 family protein K05687 PARK7; protein DJ-1 [EC:3.5.1.124]
D Acife_1491 ThiJ/PfpI domain-containing protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D Acife_2505 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D Acife_2653 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D Acife_1409 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Acife_0584 peptidase M3A and M3B thimet/oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Acife_0851 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Acife_1217 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Acife_2006 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Acife_1838 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Acife_0334 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Acife_2559 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Acife_2781 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Acife_1303 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Acife_1763 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_0296 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_0224 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2500 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2396 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_1401 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Acife_2377 Conserved hypothetical protein CHP02688 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Acife_1403 anti-sigma H sporulation factor, LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Acife_1407 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Acife_0725 Peptidase S24/S26A/S26B, conserved region K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D Acife_1761 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Acife_0962 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Acife_1792 Peptidase S49 domain protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D Acife_0562 ATP-dependent protease hslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Acife_0659 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D Acife_3275 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D Acife_0987 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D Acife_2560 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D Acife_1424 HflC protein K04087 hflC; modulator of FtsH protease HflC
D Acife_1423 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:afi01003]
D Acife_1273 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Acife_1706 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Acife_0580 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Acife_1323 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Acife_1594 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Acife_1586 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Acife_1089 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Acife_1797 glycosyl transferase family 2 K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Acife_0024 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D Acife_1678 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:afi01005]
D Acife_1308 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Acife_1311 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Acife_2805 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Acife_1306 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Acife_1691 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Acife_0935 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Acife_0117 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Acife_2790 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Acife_2791 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Acife_2769 Lipid A 3-O-deacylase-related protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Acife_1358 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Acife_0937 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Acife_2907 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Acife_2908 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Acife_1753 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Acife_2793 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Acife_0075 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Acife_2795 O-antigen polymerase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D Acife_2515 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Acife_1709 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Acife_2041 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:afi01011]
D Acife_2918 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Acife_2821 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Acife_2820 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Acife_2817 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Acife_2814 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Acife_2822 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Acife_0331 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Acife_0309 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Acife_2816 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Acife_2819 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Acife_1022 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Acife_2264 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Acife_1089 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Acife_1253 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Acife_0261 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_2813 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_0224 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2500 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2396 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Acife_2505 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D Acife_2653 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D Acife_0851 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Acife_1817 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Acife_1999 membrane-bound lytic murein transglycosylase B, putative K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Acife_0624 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Acife_1447 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Acife_0235 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Acife_2007 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Acife_2412 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Acife_2523 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:afi01004]
D Acife_1442 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Acife_1441 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Acife_2846 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Acife_1445 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Acife_1443 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_2843 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Acife_1307 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Acife_0623 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Acife_0267 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Acife_1712 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D Acife_1707 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Acife_2807 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Acife_1440 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Acife_0034 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Acife_0145 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Acife_2516 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:afi01006]
D Acife_1700 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Acife_0259 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Acife_1300 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_1329 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_2099 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Acife_1269 Squalene/phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D Acife_1510 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Acife_0978 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Acife_1020 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_1862 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:afi01007]
D Acife_0625 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Acife_1090 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Acife_1836 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Acife_3092 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Acife_2031 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Acife_1091 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Acife_2874 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Acife_0587 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Acife_2267 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Acife_1214 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Acife_0844 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Acife_0926 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Acife_0147 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Acife_1516 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Acife_2513 Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Acife_2514 Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Acife_2655 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Acife_1264 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Acife_2539 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Acife_1830 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Acife_2535 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Acife_2534 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Acife_1371 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Acife_0864 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Acife_2004 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Acife_1485 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_1390 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2921 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Acife_2785 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Acife_2789 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Acife_2636 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Acife_1506 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Acife_3261 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Acife_2277 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Acife_1388 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Acife_1666 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:afi00194]
D Acife_1606 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Acife_3189 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Acife_3190 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Acife_3191 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Acife_3192 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Acife_3193 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Acife_3194 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Acife_3195 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Acife_3196 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:afi03000]
D Acife_0386 DNA repair protein and transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Acife_1681 DNA repair protein and transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Acife_0073 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Acife_0621 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D Acife_3146 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Acife_0443 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Acife_1239 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Acife_2062 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Acife_0071 transcriptional regulator, GntR family with UTRA sensor domain K03710 K03710; GntR family transcriptional regulator
D Acife_2772 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Acife_1210 regulatory protein TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Acife_1685 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Acife_2289 transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D Acife_2662 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Acife_1609 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Acife_2749 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Acife_1740 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Acife_3215 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Acife_2390 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Acife_2072 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Acife_1098 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Acife_1670 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Acife_2214 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Acife_1533 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Acife_0826 regulatory protein ArsR K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Acife_2586 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Acife_0688 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Acife_2833 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Acife_0414 putative zinc finger/helix-turn-helix protein, YgiT family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Acife_1500 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Acife_0412 helix-turn-helix domain protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D Acife_0710 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Acife_1654 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein
D Acife_2174 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Acife_0127 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Acife_1038 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Acife_1544 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Acife_1135 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Acife_1890 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Acife_3198 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Acife_0590 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Acife_0640 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor
D Acife_2941 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Acife_3074 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Acife_1040 hypothetical protein K07733 alpA; prophage regulatory protein
D Acife_1490 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D Acife_3111 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D Acife_2943 UPF0301 protein yqgE K07735 algH; putative transcriptional regulator
D Acife_0537 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D Acife_1317 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Acife_2735 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D Acife_2810 Protein mraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:afi03021]
D Acife_2683 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Acife_2717 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Acife_2716 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Acife_2224 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Acife_2382 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Acife_0862 RNA polymerase, sigma 70 subunit, RpoD subfamily K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D Acife_2387 RNA polymerase, sigma 32 subunit, RpoH K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D Acife_1765 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Acife_0559 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D Acife_2903 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Acife_2651 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Acife_2730 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Acife_2722 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Acife_2806 Glutathione S-transferase domain-containing protein K03599 sspA; stringent starvation protein A
D Acife_2835 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D Acife_0242 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Acife_1764 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D Acife_0537 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D Acife_1317 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Acife_1023 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Acife_1128 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Acife_2654 hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:afi03019]
D Acife_1092 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Acife_0088 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Acife_1759 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Acife_1428 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Acife_1058 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Acife_1285 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Acife_0975 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Acife_1224 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Acife_0793 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1359 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_2646 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Acife_1128 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Acife_0592 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Acife_2283 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Acife_1421 Protein hfq K03666 hfq; host factor-I protein
D Acife_1413 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Acife_0803 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Acife_1429 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Acife_2042 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Acife_1235 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Acife_2899 UPF0042 nucleotide-binding protein yhbJ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:afi03011]
D Acife_1395 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Acife_1296 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Acife_2704 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Acife_2684 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Acife_2693 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Acife_0326 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Acife_2714 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Acife_2696 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Acife_3086 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Acife_2711 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Acife_2685 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Acife_2715 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Acife_2686 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Acife_2697 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Acife_2647 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Acife_0290 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Acife_2701 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Acife_0327 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Acife_2706 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Acife_1229 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Acife_2386 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Acife_2720 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Acife_2707 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Acife_2710 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Acife_2709 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Acife_2698 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Acife_2695 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Acife_0329 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Acife_2719 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Acife_2721 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Acife_2718 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Acife_3087 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Acife_2700 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Acife_2691 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Acife_2703 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Acife_2682 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Acife_2694 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Acife_0293 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Acife_2536 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Acife_2745 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Acife_2705 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Acife_2708 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Acife_2699 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Acife_2746 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Acife_0588 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Acife_2702 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Acife_2692 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Acife_1129 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Acife_1439 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Acife_0589 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Acife_0152 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Acife_2537 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Acife_2687 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Acife_1252 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Acife_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Acife_R0053 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Acife_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Acife_R0057 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Acife_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Acife_R0054 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:afi03009]
D Acife_1759 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Acife_1058 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Acife_1758 GTP-binding protein Era-like-protein K03595 era; GTPase
D Acife_2747 GTPase obg K03979 obgE; GTPase [EC:3.6.5.-]
D Acife_0537 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D Acife_1317 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Acife_2651 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Acife_2730 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Acife_2722 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Acife_1233 pseudouridine synthase Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Acife_2877 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Acife_0017 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Acife_0555 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Acife_0192 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Acife_3200 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Acife_2811 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Acife_0081 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Acife_1773 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Acife_0572 Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Acife_0092 Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Acife_1385 Protein of unknown function methylase putative K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Acife_2868 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Acife_1512 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Acife_0322 23S rRNA (uracil-5-)-methyltransferase rumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Acife_2394 pseudouridine synthase Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Acife_2027 pseudouridine synthase Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Acife_1093 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Acife_0634 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Acife_2434 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Acife_2517 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D Acife_0291 Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D Acife_0032 Ribosomal protein S12 methylthiotransferase rimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Acife_2831 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Acife_2871 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Acife_1092 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Acife_0088 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Acife_2942 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Acife_0975 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Acife_1519 GTP-binding protein engA K03977 engA; GTPase
D Acife_1422 GTP-binding proten HflX K03665 hflX; GTPase
D Acife_1070 ribosome maturation factor rimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Acife_2223 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Acife_2649 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Acife_2652 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D Acife_0093 iojap-like protein K09710 ybeB; ribosome-associated protein
D Acife_0984 metalloprotease ybeY K07042 ybeY; probable rRNA maturation factor
D Acife_0571 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D Acife_2902 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Acife_1250 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Acife_1438 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:afi03016]
D Acife_2043 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Acife_2808 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Acife_0625 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Acife_1264 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Acife_2267 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Acife_0844 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Acife_0587 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Acife_2874 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Acife_0926 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Acife_0147 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Acife_1830 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Acife_2539 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Acife_2655 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Acife_1091 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Acife_1214 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Acife_1516 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Acife_2535 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Acife_2534 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Acife_3092 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Acife_2031 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Acife_3260 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Acife_2759 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Acife_2200 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Acife_2648 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Acife_2663 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Acife_0492 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_0886 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1099 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1635 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1663 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1070 ribosome maturation factor rimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Acife_1510 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Acife_0156 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Acife_3201 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Acife_0153 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Acife_R0052 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Acife_2777 Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D Acife_2389 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Acife_0151 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA
D Acife_2513 Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Acife_2514 Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Acife_1836 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Acife_1090 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Acife_2157 zinc-binding CMP/dCMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Acife_1366 dihydrouridine synthase DuS K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Acife_0982 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Acife_0292 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Acife_1096 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D Acife_2787 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Acife_1106 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Acife_1752 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Acife_2478 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Acife_1101 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D Acife_1637 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Acife_1657 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Acife_1768 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D Acife_2189 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Acife_0135 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Acife_0134 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Acife_1602 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Acife_2522 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Acife_2188 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Acife_1315 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Acife_2435 universal protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Acife_0035 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Acife_1508 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Acife_2425 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Acife_1428 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Acife_2646 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Acife_1722 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_2967 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_1152 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_2246 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:afi03012]
D Acife_2650 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Acife_2538 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Acife_1297 Elongation factor Ts K02357 tsf; elongation factor Ts
D Acife_2712 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Acife_2724 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Acife_2713 translation elongation factor G K02355 fusA; elongation factor G
D Acife_0549 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Acife_1299 Ribosome-recycling factor K02838 frr; ribosome recycling factor
D Acife_0550 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Acife_1251 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Acife_2688 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Acife_1361 Elongation factor P K02356 efp; elongation factor P
D Acife_0925 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Acife_2433 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:afi03110]
D Acife_0958 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Acife_1705 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Acife_1402 ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Acife_0561 ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Acife_1572 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Acife_0592 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Acife_1103 Chaperone protein hscA K04044 hscA; molecular chaperone HscA
D Acife_2283 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Acife_0593 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D Acife_3105 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Acife_1102 Co-chaperone protein hscB K04082 hscB; molecular chaperone HscB
D Acife_1751 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Acife_0591 Protein grpE K03687 GRPE; molecular chaperone GrpE
D Acife_2282 10 kDa chaperonin K04078 groES; chaperonin GroES
D Acife_1763 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_0296 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Acife_2559 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Acife_3196 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Acife_1267 Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D Acife_1828 hydrogenase nickel incorporation protein hypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Acife_1827 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Acife_1692 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Acife_1405 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Acife_2864 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Acife_0960 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Acife_2914 Chaperone surA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Acife_1127 thioredoxin K03671 TXN; thioredoxin
D Acife_1696 thioredoxin K03671 TXN; thioredoxin
D Acife_2413 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D Acife_0297 thioredoxin K05838 ybbN; putative thioredoxin
D Acife_2414 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D Acife_2917 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Acife_3044 thiol:disulfide interchange protein, DsbA family K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Acife_2279 Thiol:disulfide interchange protein dsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D Acife_0095 thiol:disulfide interchange protein DsbG, putative K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_1033 DsbG domain protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_1408 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_1714 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_2442 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_1847 DsbG domain protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_3012 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_3039 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG
D Acife_3046 thiol:disulfide interchange domain protein K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:afi04131]
D Acife_1511 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Acife_1530 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Acife_0187 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0805 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_0794 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_2148 Pyruvate kinase barrel K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_1572 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:afi03051]
D Acife_1572 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:afi03032]
D Acife_2642 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Acife_0752 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_1404 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_3007 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_0730 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_2533 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D Acife_2608 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_2239 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_1956 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_1962 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_3008 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_0359 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Acife_1396 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Acife_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D Acife_0330 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Acife_0420 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Acife_2383 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Acife_0300 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2988 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_1313 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Acife_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Acife_1216 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Acife_0842 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Acife_1449 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Acife_2641 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Acife_1501 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Acife_1312 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Acife_3099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Acife_1605 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Acife_1436 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D Acife_1387 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Acife_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Acife_2124 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Acife_2125 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Acife_0011 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Acife_3067 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Acife_1912 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D Acife_2990 DNA topoisomerase type IA central domain protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:afi03036]
D Acife_1759 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Acife_1735 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Acife_0752 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_1404 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_3007 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_0730 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_2533 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D Acife_2608 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_2239 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_1956 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_1962 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_3008 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_0359 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Acife_1396 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Acife_3105 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Acife_3106 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM
D Acife_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D Acife_2833 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Acife_1421 Protein hfq K03666 hfq; host factor-I protein
D Acife_1685 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Acife_1603 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Acife_2030 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Acife_2029 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Acife_2824 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Acife_1360 Septum formation initiator K05589 ftsB; cell division protein FtsB
D Acife_0557 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Acife_0261 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_2813 penicillin-binding protein transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Acife_2659 cell division FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Acife_2812 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D Acife_2823 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Acife_2818 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Acife_0558 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Acife_2825 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Acife_1255 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Acife_2856 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD
D Acife_2412 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Acife_1416 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0051 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0009 septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D Acife_0008 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Acife_0007 Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D Acife_2495 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Acife_2496 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Acife_2497 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Acife_2499 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Acife_1412 ParA-like protein K03496 parA; chromosome partitioning protein
D Acife_1891 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Acife_3199 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Acife_3135 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Acife_1890 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Acife_3198 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Acife_2124 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Acife_2125 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Acife_3201 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Acife_3200 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Acife_0563 Tyrosine recombinase xerC K03733 xerC; integrase/recombinase XerC
D Acife_3010 integrase family protein K03733 xerC; integrase/recombinase XerC
D Acife_2332 integrase family protein K03733 xerC; integrase/recombinase XerC
D Acife_0295 Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D Acife_0596 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Acife_1578 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Acife_3097 GTP-binding protein engB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:afi03400]
D Acife_1682 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Acife_2894 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Acife_0577 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Acife_2801 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Acife_2681 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Acife_0266 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Acife_0386 DNA repair protein and transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Acife_1681 DNA repair protein and transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Acife_0551 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Acife_0853 DNA-binding DNA glycosylase/AP lyase, H2TH K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Acife_2866 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Acife_2870 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Acife_0873 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Acife_1605 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Acife_3099 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Acife_0299 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D Acife_1355 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D Acife_1363 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Acife_3104 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Acife_2717 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Acife_2716 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Acife_2683 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Acife_2224 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Acife_2666 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Acife_2054 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D Acife_2384 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Acife_2154 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Acife_1509 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D Acife_1695 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Acife_1699 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Acife_2052 Exonuclease RNase T and DNA polymerase III K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D Acife_1313 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Acife_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Acife_1216 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Acife_0842 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Acife_1449 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Acife_2641 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Acife_1501 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Acife_0300 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2988 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_0112 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Acife_0113 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Acife_0111 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Acife_0728 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Acife_1832 Protein recA K03553 recA; recombination protein RecA
D Acife_0142 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D Acife_0141 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Acife_0143 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Acife_0977 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Acife_2366 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Acife_2367 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Acife_0332 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Acife_0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D Acife_0178 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_0839 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_2220 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_2372 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Acife_1757 DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D Acife_1503 Recombination protein recR K06187 recR; recombination protein RecR
D Acife_0685 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Acife_1387 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Acife_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Acife_0011 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Acife_3067 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Acife_0752 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_1404 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_3007 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Acife_2833 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Acife_0730 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_2533 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D Acife_2608 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_2239 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_1956 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_1962 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_3008 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Acife_0359 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Acife_1396 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Acife_1224 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Acife_1735 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Acife_1720 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Acife_0724 UMUC domain protein DNA-repair protein K03502 umuC; DNA polymerase V
D Acife_0725 Peptidase S24/S26A/S26B, conserved region K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D Acife_1407 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Acife_2182 DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D Acife_1831 Regulatory protein recX K03565 recX; regulatory protein
D Acife_3108 PHP domain protein K02347 polX; DNA polymerase (family X)
D Acife_1230 UvrD/REP helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D Acife_2436 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Acife_2561 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Acife_2562 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:afi03029]
D Acife_0614 Cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Acife_3268 Cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Acife_2650 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Acife_2538 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Acife_1297 Elongation factor Ts K02357 tsf; elongation factor Ts
D Acife_2712 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Acife_2724 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Acife_2713 translation elongation factor G K02355 fusA; elongation factor G
D Acife_1758 GTP-binding protein Era-like-protein K03595 era; GTPase
D Acife_3092 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Acife_0844 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Acife_0147 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Acife_2874 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Acife_1282 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Acife_1283 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Acife_1281 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Acife_0300 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_2988 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Acife_1304 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Acife_0592 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Acife_0591 Protein grpE K03687 GRPE; molecular chaperone GrpE
D Acife_2283 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Acife_2282 10 kDa chaperonin K04078 groES; chaperonin GroES
D Acife_0593 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D Acife_0620 metallo-beta-lactamase family protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D Acife_0492 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_0886 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1099 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1635 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1663 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1102 Co-chaperone protein hscB K04082 hscB; molecular chaperone HscB
D Acife_2917 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Acife_0596 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Acife_1020 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_1862 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Acife_0155 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Acife_1572 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:afi02000]
D Acife_1781 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Acife_1372 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Acife_1002 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Acife_2272 ABC transporter domain-containing protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Acife_0264 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D Acife_1624 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Acife_1227 ABC-type transporter, integral membrane subunit K15496 wtpB; molybdate/tungstate transport system permease protein
D Acife_1228 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D Acife_0064 ABC transporter sulfonate/nitrate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Acife_0063 ABC-type transporter, integral membrane subunit K15554 ssuC; sulfonate transport system permease protein
D Acife_0062 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Acife_2778 Conserved hypothetical protein CHP00245 K02069 STAR2; UDP-glucose/iron transport system permease protein
D Acife_1261 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Acife_2884 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Acife_1118 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Acife_2885 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Acife_1117 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Acife_2886 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Acife_1262 protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component
D Acife_1348 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein
D Acife_2883 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Acife_1279 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein
D Acife_2882 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D Acife_1288 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Acife_1523 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Acife_1289 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Acife_1524 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Acife_1290 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Acife_1525 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Acife_1291 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Acife_3174 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Acife_3175 polar amino acid ABC transporter, inner membrane subunit K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Acife_0482 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Acife_0988 ABC-type metal ion transporter, periplasmic subunit K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Acife_0990 ABC-type transporter, integral membrane subunit K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Acife_0991 ABC-type transporter, integral membrane subunit K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Acife_0989 ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Acife_3240 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Acife_1218 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Acife_1219 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Acife_2904 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Acife_0167 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D Acife_0168 ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Acife_2238 ABC-2 type transporter K25180 ybhR; drug efflux transport system permease protein
D Acife_2237 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein
D Acife_2236 ABC transporter-like protein K25182 ybhF; drug efflux transport system ATP-binding protein
D Acife_2235 secretion protein HlyD family protein K25183 ybhG; membrane fusion protein YbhG
D Acife_0927 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Acife_0928 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Acife_0558 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Acife_0557 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Acife_2915 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Acife_2881 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Acife_1125 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Acife_1126 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Acife_1704 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Acife_1461 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Acife_2074 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Acife_1745 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Acife_2395 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Acife_2063 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Acife_2872 major facilitator superfamily MFS_1 K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Acife_1698 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Acife_3254 General substrate transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D Acife_2013 major facilitator superfamily MFS_1 K08368 yaaU; MFS transporter, putative metabolite transport protein
D Acife_2896 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Acife_2897 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Acife_2898 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Acife_2901 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Acife_0602 major intrinsic protein K06188 aqpZ; aquaporin Z
D Acife_1529 major intrinsic protein K06188 aqpZ; aquaporin Z
D Acife_2095 major intrinsic protein K06188 aqpZ; aquaporin Z
D Acife_0233 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D Acife_3098 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D Acife_0240 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Acife_0243 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Acife_0248 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Acife_1504 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Acife_0225 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Acife_2740 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Acife_2867 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Acife_2806 Glutathione S-transferase domain-containing protein K03599 sspA; stringent starvation protein A
D Acife_2053 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease
D Acife_0196 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D Acife_2037 MscS Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D Acife_0103 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Acife_0931 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Acife_0642 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Acife_1063 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Acife_0104 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Acife_0643 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Acife_0932 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Acife_1064 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Acife_0139 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Acife_0138 protein TolR K03560 tolR; biopolymer transport protein TolR
D Acife_0193 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Acife_3205 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Acife_3206 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Acife_3208 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Acife_0122 CrcB-like protein K06199 crcB; fluoride exporter
D Acife_0789 Mercuric transport protein MerT K08363 merT; mercuric ion transport protein
D Acife_0788 Heavy metal transport/detoxification protein K08364 merP; periplasmic mercuric ion binding protein
D Acife_2190 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Acife_0969 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Acife_2725 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Acife_0281 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Acife_2657 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Acife_2463 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Acife_0105 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Acife_0661 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Acife_2133 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Acife_0106 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Acife_0665 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Acife_0498 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Acife_0810 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Acife_0894 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Acife_2129 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Acife_2145 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
D Acife_1181 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Acife_0485 Carbohydrate-selective porin OprB K07267 oprB; porin
D Acife_2443 Carbohydrate-selective porin OprB K07267 oprB; porin
D Acife_1528 Carbohydrate-selective porin OprB K07267 oprB; porin
D Acife_1304 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Acife_1518 outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D Acife_2409 lipoprotein, putative K07287 bamC; outer membrane protein assembly factor BamC
D Acife_0633 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Acife_2750 SmpA/OmlA domain-containing protein K06186 bamE; outer membrane protein assembly factor BamE
D Acife_1743 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D Acife_1742 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D Acife_2905 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D Acife_2906 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC
D Acife_2913 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Acife_0843 rare lipoprotein B, putative K03643 lptE; LPS-assembly lipoprotein
D Acife_1321 hypothetical protein K20543 bcsC; cellulose synthase operon protein C
D Acife_1596 hypothetical protein K20543 bcsC; cellulose synthase operon protein C
D Acife_1588 Tetratricopeptide TPR_1 repeat-containing protein K20543 bcsC; cellulose synthase operon protein C
D Acife_1589 cellulose synthase operon C domain protein K20543 bcsC; cellulose synthase operon protein C
D Acife_0985 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D Acife_0490 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Acife_1342 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Acife_2140 acriflavin resistance protein K15726 czcA; heavy metal efflux system protein
D Acife_0500 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_0812 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_0896 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_2147 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Acife_0050 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_1415 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_3116 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Acife_0974 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter
D Acife_1213 Na(+)/H(+) antiporter nhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Acife_1708 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter
D Acife_2842 sodium/hydrogen exchanger K26731 CHX; K+:H+ antiporter
D Acife_3151 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Acife_3150 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Acife_2118 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Acife_0852 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Acife_1530 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Acife_2213 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D Acife_2264 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Acife_2935 Low affinity potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D Acife_1713 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Acife_2818 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Acife_0644 TonB family protein K03832 tonB; periplasmic protein TonB
D Acife_1065 TonB family protein K03832 tonB; periplasmic protein TonB
D Acife_1697 TonB family protein K03832 tonB; periplasmic protein TonB
D Acife_0132 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Acife_0137 protein TolA K03646 tolA; colicin import membrane protein
D Acife_0136 Protein tolB K03641 tolB; TolB protein
D Acife_1460 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1459 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Acife_1457 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Acife_2065 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Acife_2770 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Acife_0499 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_0811 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_0895 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_2146 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Acife_2139 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D Acife_2418 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D Acife_1416 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0051 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0199 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Acife_1180 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Acife_2444 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Acife_2445 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Acife_1728 TspO and MBR like protein K05770 TSPO; translocator protein
D Acife_0486 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:afi02044]
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
D Acife_2858 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Acife_1557 pilin, putative K02650 pilA; type IV pilus assembly protein PilA
D Acife_1915 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Acife_1968 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Acife_1976 pilin, putative K02650 pilA; type IV pilus assembly protein PilA
D Acife_2861 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D Acife_1969 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC
D Acife_1553 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC
D Acife_1513 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D Acife_2158 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Acife_2159 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Acife_2160 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D Acife_2161 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D Acife_2162 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Acife_2763 twitching motility protein K02669 pilT; twitching motility protein PilT
D Acife_2762 twitching motility protein K02670 pilU; twitching motility protein PilU
D Acife_1552 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D Acife_1551 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D Acife_1549 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D Acife_1450 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D Acife_2201 Motility protein FimV K08086 fimV; pilus assembly protein FimV
D Acife_0274 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Acife_0273 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Acife_0272 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Acife_0283 Type II secretion system F domain-containing protein K12510 tadB; tight adherence protein B
D Acife_0284 Type II secretion system F domain-containing protein K12511 tadC; tight adherence protein C
D Acife_2948 AAA ATPase K12283 mshM; MSHA biogenesis protein MshM
D Acife_2766 protein of unknown function YGGT K02221 yggT; YggT family protein
D Acife_3103 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Acife_3259 putative comEA-like protein K02237 comEA; competence protein ComEA
D Acife_0930 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Acife_1942 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1
D Acife_0719 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Acife_1990 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Acife_2971 TraG domain-containing protein K12056 traG; conjugal transfer mating pair stabilization protein TraG
D Acife_2973 pilus assembly protein TraF, putative K12057 traF; conjugal transfer pilus assembly protein TraF
D Acife_3036 conjugal transfer protein TraN, putative K12058 traN; conjugal transfer mating pair stabilization protein TraN
D Acife_3037 TraU family protein K12060 traU; conjugal transfer pilus assembly protein TraU
D Acife_3038 Type-F conjugative transfer system pilin assembly protein TrbC K12061 traW; conjugal transfer pilus assembly protein TraW
D Acife_3041 Peptidase S26, conserved region K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D Acife_3043 type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D Acife_3048 type IV conjugative transfer system protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D Acife_3049 conjugal transfer protein, putative K12065 traB; conjugal transfer pilus assembly protein TraB
D Acife_3050 TraK lipoprotein, putative K12066 traK; conjugal transfer pilus assembly protein TraK
D Acife_3051 type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D Acife_3047 conjugal transfer protein TraA, putative K12069 traA; conjugal transfer pilus assembly protein TraA
D Acife_2972 TraH family protein K12072 traH; conjugative transfer pilus assembly protein TraH
D Acife_0541 type II secretion system protein E K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8]
D Acife_0542 hypothetical protein K12204 dotC; defect in organelle trafficking protein DotC
D Acife_0543 hypothetical protein K12205 dotD; defect in organelle trafficking protein DotD
D Acife_0437 hypothetical protein K12206 icmB; intracellular multiplication protein IcmB [EC:7.2.4.8]
D Acife_0428 hypothetical protein K12207 icmC; intracellular multiplication protein IcmC
D Acife_0425 conjugation TrbI family protein K12209 icmE; intracellular multiplication protein IcmE
D Acife_0424 hypothetical protein K12213 icmK; intracellular multiplication protein IcmK
D Acife_0423 IcmL (DotI) K12214 icmL; intracellular multiplication protein IcmL
D Acife_0442 hypothetical protein K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8]
D Acife_0441 hypothetical protein K12218 icmP; intracellular multiplication protein IcmP
D Acife_1909 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D Acife_1907 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D Acife_1906 hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D Acife_1904 CagE, TrbE, VirB component of type IV transporter system, conserved region K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D Acife_1897 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF
D Acife_1896 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG
D Acife_1894 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D Acife_1899 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D Acife_1898 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D Acife_2803 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Acife_1267 Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D Acife_2186 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Acife_2723 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Acife_2185 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Acife_2555 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Acife_2690 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Acife_0289 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Acife_0556 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Acife_2187 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Acife_0155 Membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Acife_2927 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Acife_2928 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Acife_2929 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:afi02042]
D Acife_2190 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Acife_2411 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:afi02022]
D Acife_1287 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Acife_0101 transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Acife_1286 two component transcriptional regulator PhoB, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Acife_2126 transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Acife_0218 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_0054 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_1060 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Acife_0217 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Acife_0053 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Acife_1059 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Acife_2137 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Acife_2136 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Acife_1080 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Acife_1081 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Acife_2130 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Acife_2131 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Acife_0256 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Acife_0257 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Acife_0019 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Acife_0020 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Acife_2487 signal transduction histidine kinase, nitrogen specific, NtrB K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Acife_2860 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Acife_2859 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Acife_0684 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_2892 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Acife_0682 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Acife_2890 putative two component, sigma54 specific, transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Acife_1591 multi-sensor hybrid histidine kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Acife_1592 response regulator receiver modulated metal dependent phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D Acife_1857 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Acife_1858 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Acife_2073 nitrate transporter, putative K22067 nasS; two-component system, oxyanion-binding sensor
D Acife_2082 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:afi02035]
D Acife_0022 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Acife_2859 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Acife_2860 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Acife_2763 twitching motility protein K02669 pilT; twitching motility protein PilT
D Acife_2762 twitching motility protein K02670 pilU; twitching motility protein PilU
D Acife_1557 pilin, putative K02650 pilA; type IV pilus assembly protein PilA
D Acife_1915 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Acife_1968 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Acife_1976 pilin, putative K02650 pilA; type IV pilus assembly protein PilA
D Acife_2861 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D Acife_1969 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC
D Acife_1553 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC
D Acife_2858 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Acife_1513 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D Acife_2162 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Acife_2161 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D Acife_2160 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D Acife_2159 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Acife_2158 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Acife_1450 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D Acife_1552 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D Acife_1551 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D Acife_1549 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D Acife_0274 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Acife_0273 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Acife_0272 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:afi04812]
D Acife_2212 UPF0103/Mediator of ErbB2-driven cell motility-containing protein K06990 MEMO1; MEMO1 family protein
D Acife_2495 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Acife_0533 StbA family protein K18640 parM; plasmid segregation protein ParM
D Acife_2825 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Acife_2824 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Acife_0009 septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D Acife_0008 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Acife_0007 Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D Acife_1412 ParA-like protein K03496 parA; chromosome partitioning protein
D Acife_1891 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Acife_3199 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Acife_3135 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Acife_1890 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Acife_3198 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:afi04147]
D Acife_1572 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Acife_0793 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_1359 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Acife_0187 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0805 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Acife_0186 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Acife_0804 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Acife_0185 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_0794 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_2148 Pyruvate kinase barrel K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Acife_1779 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Acife_2283 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Acife_0592 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Acife_0223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_0784 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Acife_2040 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Acife_2712 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Acife_2724 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Acife_3260 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Acife_2807 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Acife_0971 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Acife_2689 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Acife_2286 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Acife_0220 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Acife_2638 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Acife_2855 Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Acife_0314 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Acife_0856 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_2341 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Acife_3256 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Acife_2521 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Acife_1072 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Acife_0961 DJ-1 family protein K05687 PARK7; protein DJ-1 [EC:3.5.1.124]
D Acife_1430 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1801 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_3080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Acife_1620 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Acife_0694 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Acife_1368 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Acife_2556 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:afi02048]
D Acife_0161 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Acife_0306 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Acife_0838 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Acife_0675 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Acife_2404 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Acife_2258 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Acife_0163 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Acife_0302 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Acife_0835 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Acife_0669 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Acife_2253 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Acife_0165 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Acife_0301 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Acife_0832 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Acife_0668 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Acife_2252 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Acife_0527 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Acife_1948 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Acife_2184 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Acife_1806 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Acife_2181 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Acife_1809 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Acife_0525 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Acife_1949 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Acife_1951 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Acife_2250 restriction endonuclease K07448 mrr; restriction system protein
D Acife_0398 restriction endonuclease K07448 mrr; restriction system protein
D Acife_3034 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Acife_2959 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Acife_0676 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Acife_3246 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Acife_0878 SpoVT/AbrB domain-containing protein K07172 mazE; antitoxin MazE
D Acife_3035 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D Acife_2960 SpoVT/AbrB domain-containing protein K07172 mazE; antitoxin MazE
D Acife_1923 PemK family protein K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D Acife_1187 transcriptional modulator of MazE/toxin, MazF K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D Acife_1541 transcriptional modulator of MazE/toxin, MazF K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D Acife_1542 SpoVT/AbrB domain-containing protein K18842 chpS; antitoxin ChpS
D Acife_1188 SpoVT/AbrB domain-containing protein K18842 chpS; antitoxin ChpS
D Acife_1924 SpoVT/AbrB domain-containing protein K18842 chpS; antitoxin ChpS
D Acife_1568 hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D Acife_1569 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF
D Acife_0180 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF
D Acife_2257 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Acife_1543 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Acife_1544 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Acife_2256 stability protein StbD, putative K18923 stbD; antitoxin StbD
D Acife_1204 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D Acife_0039 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Acife_0846 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Acife_0038 prevent-host-death family protein K19159 yefM; antitoxin YefM
D Acife_0847 prevent-host-death family protein K19159 yefM; antitoxin YefM
D Acife_1499 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Acife_1500 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Acife_0837 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Acife_3088 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Acife_1205 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Acife_0836 addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4
D Acife_0374 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Acife_1575 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Acife_0375 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Acife_1574 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Acife_2119 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Acife_3072 hypothetical protein K21498 higA-1; antitoxin HigA-1
D Acife_0415 hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D Acife_0414 putative zinc finger/helix-turn-helix protein, YgiT family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Acife_1722 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_2967 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_1152 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_2246 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Acife_2245 SpoVT/AbrB domain-containing protein K18829 mvpT; antitoxin VapB
D Acife_1153 SpoVT/AbrB domain-containing protein K18829 mvpT; antitoxin VapB
D Acife_1496 hypothetical protein K18829 mvpT; antitoxin VapB
D Acife_1721 SpoVT/AbrB like domain protein K18829 mvpT; antitoxin VapB
D Acife_2968 virulence-associated protein, putative K18829 mvpT; antitoxin VapB
D Acife_2400 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D Acife_0040 hypothetical protein K21495 fitA; antitoxin FitA
D Acife_2401 Arc domain-/DNA-binding domain-containing protein K21495 fitA; antitoxin FitA
D Acife_2825 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Acife_2495 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Acife_2124 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Acife_2125 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Acife_0625 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Acife_0492 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_0886 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1099 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1635 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Acife_1663 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:afi04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:afi04090]
C 01504 Antimicrobial resistance genes [BR:afi01504]
D Acife_2137 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Acife_2136 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Acife_0851 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Acife_1416 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0051 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Acife_0050 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_1415 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Acife_2418 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D Acife_2662 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Acife_2263 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Acife_0200 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:afi03100]
D Acife_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0036 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Acife_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Acife_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Acife_R0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Acife_R0018 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Acife_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Acife_R0007 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Acife_R0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Acife_R0037 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Acife_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Acife_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Acife_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Acife_R0005 tRNA-His K14226 tRNA-His; tRNA His
D Acife_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Acife_R0056 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Acife_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Acife_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Acife_R0028 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Acife_R0003 tRNA-Met K14230 tRNA-Met; tRNA Met
D Acife_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D Acife_R0047 tRNA-Met K14230 tRNA-Met; tRNA Met
D Acife_R0002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Acife_R0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Acife_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Acife_R0010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Acife_R0012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Acife_R0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Acife_R0032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Acife_R0033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Acife_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Acife_R0021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Acife_R0048 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Acife_R0051 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Acife_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D Acife_R0022 tRNA-Val K14237 tRNA-Val; tRNA Val
D Acife_R0040 tRNA-Val K14237 tRNA-Val; tRNA Val
D Acife_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Acife_R0057 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Acife_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Acife_R0054 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Acife_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Acife_R0053 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Acife_R0026 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Acife_R0052 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Acife_R0029 ssrA; tmRNA as predicted by Rfam (RF00023), score 235.13 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Acife_1272 hopanoid-associated sugar epimerase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D Acife_0650 (2Fe-2S)-binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Acife_1619 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Acife_3265 hypothetical protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D Acife_0096 Peptide methionine sulfoxide reductase msrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Acife_0097 Peptide methionine sulfoxide reductase msrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Acife_0082 Di-haem cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Acife_1610 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Acife_2121 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Acife_0787 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D Acife_2290 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D Acife_1872 cytochrome c K20150 cyc2; iron:rusticyanin reductase [EC:1.16.9.1]
D Acife_1532 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Acife_2309 radical SAM domain-containing protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Acife_3278 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Acife_1248 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D Acife_1246 hydrogenase-4, E subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D Acife_1245 NADH/Ubiquinone/plastoquinone (complex I) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D Acife_0861 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Acife_1260 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Acife_0120 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Acife_3203 Methyltransferase type 12 K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D Acife_0986 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Acife_2170 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D Acife_2780 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Acife_1782 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D Acife_2779 arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Acife_1652 Dinitrogenase reductase ADP-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D Acife_1671 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Acife_1231 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Acife_1310 DegT/DnrJ/EryC1/StrS aminotransferase K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122]
D Acife_2276 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Acife_3224 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Acife_0949 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Acife_2300 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Acife_2323 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Acife_0957 UPF0061 protein ydiU K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Acife_2900 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Acife_0140 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Acife_1179 protein-tyrosine phosphatase, putative K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Acife_1777 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Acife_1521 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Acife_2426 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Acife_1772 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Acife_1587 glycoside hydrolase family 8 K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D Acife_1319 glycoside hydrolase family 8 K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D Acife_1598 glycoside hydrolase family 8 K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D Acife_1653 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D Acife_0015 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Acife_0641 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Acife_2274 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Acife_1411 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D Acife_1419 Septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D Acife_1784 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Acife_1505 YjeF-related protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D Acife_1115 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Acife_0807 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Acife_0890 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Acife_0110 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D Acife_1837 Sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D Acife_2455 histone deacetylase superfamily K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D Acife_2294 Protein fdhD K02379 fdhD; FdhD protein
D Acife_0010 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K05524 fdxA; ferredoxin
D Acife_0067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K05524 fdxA; ferredoxin
D Acife_1780 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K05524 fdxA; ferredoxin
D Acife_1647 ferredoxin K11107 yfaE; ferredoxin
D Acife_1100 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Acife_1636 Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein
D Acife_1639 NifQ family protein K15790 nifQ; nitrogen fixation protein NifQ
D Acife_1240 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D Acife_2229 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D Acife_2456 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D Acife_3132 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D Acife_0780 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D Acife_1241 CbbQ protein K04748 norQ; nitric oxide reductase NorQ protein
D Acife_2230 CbbQ protein K04748 norQ; nitric oxide reductase NorQ protein
D Acife_2457 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D Acife_3133 p30 protein K04748 norQ; nitric oxide reductase NorQ protein
D Acife_1643 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D Acife_1664 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT
D Acife_1661 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Acife_1662 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Acife_1655 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Acife_1644 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Acife_1645 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Acife_1621 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Acife_1618 ferredoxin-like protein K03855 fixX; ferredoxin like protein
D Acife_1632 Nitrogenase-stabilizing/protective protein nifW K02595 nifW; nitrogenase-stabilizing/protective protein
D Acife_1718 rusticyanin K18683 rus; rusticyanin
D Acife_1864 rusticyanin K18683 rus; rusticyanin
D Acife_0470 rusticyanin K18683 rus; rusticyanin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Acife_2764 protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Acife_2727 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D Acife_1397 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D Acife_2261 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Acife_1322 Cellulose synthase BcsB K20541 bcsB; cellulose synthase operon protein B
D Acife_1595 Cellulose synthase BcsB K20541 bcsB; cellulose synthase operon protein B
D Acife_1586 cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
C 99987 Cofactor metabolism
D Acife_2726 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Acife_2429 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D Acife_3274 Sterol-binding domain protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D Acife_2206 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Acife_2751 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D Acife_1486 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D Acife_3114 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D Acife_0770 DoxX family protein K15977 K15977; putative oxidoreductase
D Acife_2622 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K15977 K15977; putative oxidoreductase
D Acife_1803 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Acife_0085 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Acife_0976 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Acife_2932 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Acife_0717 AntA/AntB antirepressor domain protein K07741 antB; anti-repressor protein
D Acife_0244 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Acife_0735 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D Acife_0579 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Acife_0959 ATP-dependent Clp protease adapter protein clpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Acife_1400 Trigger factor K03545 tig; trigger factor
D Acife_2753 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Acife_1825 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Acife_1824 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Acife_1823 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Acife_1826 Acylphosphatase K04656 hypF; hydrogenase maturation protein HypF
D Acife_0229 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D Acife_0698 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D Acife_2430 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Acife_0255 20S proteasome A and B subunits K07395 K07395; putative proteasome-type protease
D Acife_0173 OsmC family protein K07397 yhfA; putative redox protein
D Acife_0083 ResB family protein K07399 resB; cytochrome c biogenesis protein
D Acife_1850 ResB family protein K07399 resB; cytochrome c biogenesis protein
D Acife_0654 XshC-Cox1-family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Acife_0376 hypothetical protein K07454 K07454; putative restriction endonuclease
D Acife_2679 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Acife_0195 RmuC-domain protein K09760 rmuC; DNA recombination protein RmuC
D Acife_2026 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D Acife_0079 UPF0102 protein yraN K07460 yraN; putative endonuclease
D Acife_0013 DNA protecting protein DprA K04096 smf; DNA processing protein
D Acife_2656 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Acife_0756 Resolvase domain-containing protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D Acife_0530 P4 alpha zinc-binding domain protein K06919 K06919; putative DNA primase/helicase
D Acife_0321 3'-5' exonuclease, PolB-like protein K07501 K07501; 3'-5' exonuclease
D Acife_2617 hypothetical protein K07481 K07481; transposase, IS5 family
D Acife_0341 ISAfe4, tranposase orf1 K07483 K07483; transposase
D Acife_0395 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_0947 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_0859 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_0763 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_2301 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_2349 ISAfe4, tranposase orf1 K07483 K07483; transposase
D Acife_3167 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_3172 transposase IS3/IS911 family protein K07483 K07483; transposase
D Acife_2350 IS66 Orf2 family protein K07484 K07484; transposase
D Acife_1983 IS66 Orf2 family protein K07484 K07484; transposase
D Acife_2619 IS66 Orf2 family protein K07484 K07484; transposase
D Acife_0342 IS66 Orf2 family protein K07484 K07484; transposase
D Acife_2620 transposase IS66 K07484 K07484; transposase
D Acife_1981 transposase IS66 K07484 K07484; transposase
D Acife_3222 IS66 Orf2 family protein K07484 K07484; transposase
D Acife_1203 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Acife_1563 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Acife_2317 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Acife_2667 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Acife_1979 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Acife_0460 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Acife_0919 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Acife_2621 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Acife_2348 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Acife_2343 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Acife_2361 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Acife_1971 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Acife_0396 Integrase catalytic region K07497 K07497; putative transposase
D Acife_0948 Integrase catalytic region K07497 K07497; putative transposase
D Acife_0860 Integrase catalytic region K07497 K07497; putative transposase
D Acife_0764 Integrase catalytic region K07497 K07497; putative transposase
D Acife_2329 Integrase catalytic region K07497 K07497; putative transposase
D Acife_2575 Integrase catalytic region K07497 K07497; putative transposase
D Acife_3166 Integrase catalytic region K07497 K07497; putative transposase
D Acife_3171 Integrase catalytic region K07497 K07497; putative transposase
D Acife_2302 Integrase catalytic region K07497 K07497; putative transposase
D Acife_1984 hypothetical protein K07497 K07497; putative transposase
D Acife_2949 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Acife_0056 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Acife_1376 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Acife_1502 UPF0133 protein ybaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Acife_0198 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Acife_0645 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Acife_2360 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D Acife_1137 intracellular septation protein K06190 ispZ; intracellular septation protein
D Acife_0963 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Acife_0568 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Acife_0983 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Acife_1611 PhoH family protein K07175 phoH2; PhoH-like ATPase
D Acife_0249 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D Acife_1327 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
D Acife_1330 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
D Acife_2089 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
D Acife_1789 UPF0234 protein yajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D Acife_2658 Outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D Acife_0546 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D Acife_1280 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Acife_1305 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Acife_0466 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein
D Acife_1601 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein
D Acife_1061 outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein
D Acife_1514 transcriptional regulator, XRE family K15539 rodZ; cytoskeleton protein RodZ
D Acife_1883 hypothetical protein K21908 hdeD; membrane protein HdeD
D Acife_2021 hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D Acife_1292 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Acife_0099 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D Acife_1799 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D Acife_0570 Protein ApaG K06195 apaG; ApaG protein
D Acife_1223 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Acife_2194 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Acife_2106 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D Acife_1673 globin K06886 glbN; hemoglobin
D Acife_1107 Patatin K07001 K07001; NTE family protein
D Acife_1082 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D Acife_3079 Iron--sulfur cluster insertion protein erpA K15724 erpA; iron-sulfur cluster insertion protein
D Acife_1437 ribonuclease BN K07058 K07058; membrane protein
D Acife_2022 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Acife_1840 High frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein
D Acife_0012 Protein smg K03747 smg; Smg protein
D Acife_2449 SNARE associated protein K03975 dedA; membrane-associated protein
D Acife_2056 SNARE associated protein K03975 dedA; membrane-associated protein
D Acife_2110 SNARE associated protein K03975 dedA; membrane-associated protein
D Acife_0150 protein of unknown function DUF202 K00389 yidH; putative membrane protein
D Acife_1607 protein of unknown function DUF202 K00389 yidH; putative membrane protein
D Acife_0339 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
C 99997 Function unknown
D Acife_1138 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Acife_0902 hypothetical protein K06926 K06926; uncharacterized protein
D Acife_0876 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Acife_2510 small GTP-binding protein K06945 K06945; uncharacterized protein
D Acife_0912 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein
D Acife_1276 hopanoid biosynthesis associated RND transporter like protein HpnN K07003 K07003; uncharacterized protein
D Acife_0924 4-vinyl reductase 4VR K07013 K07013; uncharacterized protein
D Acife_0169 hypothetical protein K07018 K07018; uncharacterized protein
D Acife_2173 alpha/beta hydrolase fold containing protein K07019 K07019; uncharacterized protein
D Acife_1566 protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D Acife_0210 protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D Acife_1684 PIN domain protein family protein K07064 K07064; uncharacterized protein
D Acife_0369 hypothetical protein K07064 K07064; uncharacterized protein
D Acife_2579 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Acife_1808 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Acife_2397 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Acife_3179 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Acife_2469 hypothetical protein K07092 K07092; uncharacterized protein
D Acife_0766 hypothetical protein K07092 K07092; uncharacterized protein
D Acife_2674 hypothetical protein K07092 K07092; uncharacterized protein
D Acife_1522 hypothetical protein K07092 K07092; uncharacterized protein
D Acife_0080 lipoprotein, putative K07121 K07121; uncharacterized protein
D Acife_2432 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Acife_1796 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Acife_1558 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Acife_2728 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Acife_0736 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D Acife_0732 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D Acife_2512 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D Acife_1154 AAA family ATPase K07133 K07133; uncharacterized protein
D Acife_2391 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein
D Acife_0154 UPF0161 protein yidD K08998 K08998; uncharacterized protein
D Acife_0560 hypothetical protein K09004 K09004; uncharacterized protein
D Acife_1380 hypothetical protein K09004 K09004; uncharacterized protein
D Acife_2273 hypothetical protein K09004 K09004; uncharacterized protein
D Acife_0285 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Acife_2385 GatB/YqeY domain protein K09117 K09117; uncharacterized protein
D Acife_2609 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Acife_2767 UPF0235 protein yggU K09131 K09131; uncharacterized protein
D Acife_0121 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Acife_2211 AMMECR1 domain protein K09141 K09141; uncharacterized protein
D Acife_2501 protein of unknown function DUF493 K09158 K09158; uncharacterized protein
D Acife_2393 hypothetical protein K09700 K09700; uncharacterized protein
D Acife_0208 UPF0178 protein yaiI K09768 K09768; uncharacterized protein
D Acife_1136 YCII-related protein K09780 K09780; uncharacterized protein
D Acife_0247 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Acife_0936 UPF0434 protein ycaR K09791 K09791; uncharacterized protein
D Acife_0044 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Acife_0445 UPF0753 protein K09822 K09822; uncharacterized protein
D Acife_1875 UPF0753 protein K09822 K09822; uncharacterized protein
D Acife_3126 UPF0753 protein K09822 K09822; uncharacterized protein
D Acife_0564 protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D Acife_0929 Protein of unknown function DUF2062 K09928 K09928; uncharacterized protein
D Acife_0114 Protein of unknown function DUF2063 K09929 K09929; uncharacterized protein
D Acife_0115 protein of unknown function DUF692 K09930 K09930; uncharacterized protein
D Acife_0768 protein of unknown function DUF692 K09930 K09930; uncharacterized protein
D Acife_0265 hypothetical protein K09940 K09940; uncharacterized protein
D Acife_0383 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Acife_1483 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024