+E Replication protein KO
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DNA Replication Proteins - Acidithiobacillus ferridurans
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D AFERRID_16370 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D AFERRID_01410 Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AFERRID_25830 Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D AFERRID_21340 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AFERRID_24010 DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D AFERRID_25920 DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D AFERRID_26170 DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D AFERRID_10030 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AFERRID_24000 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFERRID_24030 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFERRID_05650 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFERRID_25940 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFERRID_21260 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AFERRID_14800 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AFERRID_07720 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AFERRID_25760 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D AFERRID_23790 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D AFERRID_04070 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AFERRID_25790 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFERRID_07960 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFERRID_23820 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E AFERRID_22840 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E AFERRID_14790 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E AFERRID_03200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E AFERRID_16920 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E AFERRID_28830 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E AFERRID_16380 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E AFERRID_28850 DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E AFERRID_16370 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E AFERRID_22830 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E AFERRID_16200 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E AFERRID_19900 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E AFERRID_16370 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E AFERRID_22830 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
D AFERRID_00510 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AFERRID_25780 Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AFERRID_23810 Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D AFERRID_28690 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
B DNA Topoisomerases
C AFERRID_21170 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C AFERRID_14770 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C AFERRID_01600 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C AFERRID_01610 DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C AFERRID_00370 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C AFERRID_14530 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C AFERRID_25320 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C AFERRID_27100 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022