+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Antechinus flavipes (yellow-footed antechinus)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        127544052 mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        127553685 mRNA cap guanine-N7 methyltransferase-like	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        127561986 mRNA-capping enzyme isoform X1	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        127558341 cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        127548545 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        127561332 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        127561619 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        127547643 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 isoform X1	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        127551462 RNA guanine-N7 methyltransferase activating subunit	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        127560792 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        127558377 nuclear cap-binding protein subunit 2 isoform X1	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        127562374 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        127550732 cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        127539824 cleavage and polyadenylation specificity factor subunit 7 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
E        127564715 cleavage and polyadenylation specificity factor subunit 6 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        127539616 polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        127555131 pre-mRNA cleavage complex 2 protein Pcf11 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        127544598 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        127549376 cleavage and polyadenylation specificity factor subunit 2 isoform X1	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        127548612 cleavage and polyadenylation specificity factor subunit 3 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        127560521 putative cleavage and polyadenylation specificity factor subunit 4-like protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        127563339 cleavage and polyadenylation specificity factor subunit 4 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        127539875 pre-mRNA 3'-end-processing factor FIP1 isoform X1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        127554286 pre-mRNA 3' end processing protein WDR33 isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        127542372 WD repeat-containing protein 82-like	K14962 WDR82; COMPASS component SWD2 
E        127554056 WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        127557181 WD repeat-containing protein 82-like	K14962 WDR82; COMPASS component SWD2 
E        127541293 serine/threonine-protein phosphatase PP1-alpha catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        127545469 serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        127548703 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        127542912 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        127547518 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        127547519 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        127547520 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        127552342 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        127552343 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        127556006 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        127548940 cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        127542378 cleavage stimulation factor subunit 2 isoform X1	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        127541041 cleavage stimulation factor subunit 3	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        127542702 cleavage stimulation factor subunit 3-like	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        127556291 symplekin isoform X1	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        127550781 small nuclear ribonucleoprotein-associated proteins B and B' isoform X1	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        127545900 small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        127562684 small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        127564523 small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        127548102 small nuclear ribonucleoprotein G-like	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        127548200 small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        127555425 U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        127550141 U7 snRNA-associated Sm-like protein LSm11	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        127549376 cleavage and polyadenylation specificity factor subunit 2 isoform X1	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        127548612 cleavage and polyadenylation specificity factor subunit 3 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        127542378 cleavage stimulation factor subunit 2 isoform X1	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        127556291 symplekin isoform X1	K06100 SYMPK; symplekin 
E        127539796 histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
E        127561999 CASP8-associated protein 2 isoform X1	K25593 CASP8AP2; CASP8-associated protein 2 
D      DRB sensitivity inducing factor (DSIF) complex
E        127559984 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        127546952 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        127556125 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        127557697 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        127557699 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        127559264 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        127561670 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        127551019 N6-adenosine-methyltransferase catalytic subunit	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        127540891 N6-adenosine-methyltransferase non-catalytic subunit isoform X1	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        127543980 N(6)-adenine-specific methyltransferase METTL4 isoform X1	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        127558818 RNA N6-adenosine-methyltransferase METTL16	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        127553422 LOW QUALITY PROTEIN: pre-mRNA-splicing regulator WTAP-like	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        127562378 pre-mRNA-splicing regulator WTAP	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        127544282 protein virilizer homolog isoform X1	K22910 VIRMA; protein virilizer 
E        127554298 putative RNA-binding protein 15B	K13190 RBM15; RNA-binding protein 15 
E        127559361 RNA-binding protein 15	K13190 RBM15; RNA-binding protein 15 
E        127553240 zinc finger CCCH domain-containing protein 13 isoform X1	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        127564817 E3 ubiquitin-protein ligase Hakai isoform X1	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        127548109 poly(A) polymerase gamma isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        127549929 poly(A) polymerase alpha isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        127558392 poly(A) RNA polymerase GLD2 isoform X1	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
E        127541271 speckle targeted PIP5K1A-regulated poly(A) polymerase	K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] 
D      Negative regulators of mRNA 3' end processing
E        127553145 BRCA1-associated RING domain protein 1 isoform X1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        127553334 RNA-binding protein 26 isoform X1	K13192 RBM26; RNA-binding protein 26 
E        127550712 alpha-ketoglutarate-dependent dioxygenase FTO isoform X1	K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        127555879 TAR DNA-binding protein 43	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      127559963 probable ATP-dependent RNA helicase DHX40 isoform X1	K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6] 
D      127539137 DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      127557781 tRNA N(3)-methylcytidine methyltransferase METTL8, mitochondrial isoform X1	K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-] 
D      127539478 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      127553423 LOW QUALITY PROTEIN: methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      127562965 methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      127555633 terminal nucleotidyltransferase 5B	K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-] 
D      127561946 terminal nucleotidyltransferase 5A	K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-] 
D      127559214 terminal nucleotidyltransferase 5C	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      127542913 terminal nucleotidyltransferase 5D	K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19] 
D      127549425 zinc finger CCCH domain-containing protein 14 isoform X1	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
D      127560962 serrate RNA effector molecule homolog isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        127559164 RNA-binding protein 8A	K12876 RBM8A; RNA-binding protein 8A 
E        127563305 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        127538071 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127538129 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127538188 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547429 LOW QUALITY PROTEIN: THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547436 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547441 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547452 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547459 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547470 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547476 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547487 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547492 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127557069 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127557529 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127558169 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127558170 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127560627 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        127561057 spliceosome RNA helicase DDX39B	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        127545988 eukaryotic initiation factor 4A-III-like isoform X1	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        127560670 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        127552396 coiled-coil domain-containing protein 174 isoform X1	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        127560195 protein CASC3	K14323 CASC3; protein CASC3 
E        127554754 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        127549763 pinin	K13114 PNN; pinin 
E        127556962 LOW QUALITY PROTEIN: pinin-like	K13114 PNN; pinin 
E        127551045 apoptotic chromatin condensation inducer in the nucleus isoform X1	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        127543442 RNA-binding protein with serine-rich domain 1 isoform X1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        127555683 serine/arginine repetitive matrix protein 1 isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        127543968 THO complex subunit 1 isoform X1	K12878 THOC1; THO complex subunit 1 
E        127542752 THO complex subunit 2-like	K12879 THOC2; THO complex subunit 2 
E        127542800 THO complex subunit 2 isoform X1	K12879 THOC2; THO complex subunit 2 
E        127543113 THO complex subunit 3-like	K12880 THOC3; THO complex subunit 3 
E        127550250 THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        127538071 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127538129 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127538188 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547429 LOW QUALITY PROTEIN: THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547436 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547441 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547452 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547459 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547470 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547476 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547487 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127547492 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127557069 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127557529 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127558169 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127558170 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        127560627 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        127545653 THO complex subunit 5 homolog isoform X1	K13174 THOC5; THO complex subunit 5 
E        127542515 THO complex subunit 6 homolog isoform X1	K13175 THOC6; THO complex subunit 6 
E        127550882 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
E        127559888 chromatin target of PRMT1 protein isoform X1	K28424 CHTOP; chromatin target of PRMT1 protein 
D      TREX-2 complex
E        127553489 PCI domain-containing protein 2 isoform X1	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        127564161 26S proteasome complex subunit SEM1	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        127541103 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127541538 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127543844 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127544372 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127556951 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127556952 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127557698 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127557700 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127557701 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127557906 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        127541983 centrin-1-like	K10840 CETN2; centrin-2 
E        127542911 centrin-2 isoform X1	K10840 CETN2; centrin-2 
E        127559587 centrin-3 isoform X1	K16466 CETN3; centrin-3 
E        127561334 germinal-center associated nuclear protein-like	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
E        127562530 germinal-center associated nuclear protein	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
D      Nuclear pore complex
E        127562793 nucleoprotein TPR isoform X1	K09291 TPR; nucleoprotein TPR 
E        127548950 mRNA export factor RAE1	K14298 RAE1; mRNA export factor 
E        127551924 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        127537812 nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        127560479 nuclear pore complex protein Nup85	K14304 NUP85; nuclear pore complex protein Nup85 
E        127562320 nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        127538992 nuclear pore complex protein Nup50 isoform X1	K14295 NUP50; nuclear pore complex protein Nup50 
E        127539936 nucleoporin p54 isoform X1	K14308 NUP54; nuclear pore complex protein Nup54 
E        127542332 nucleoporin-62 C-terminal-like protein isoform X1	K14306 NUP62; nuclear pore complex protein Nup62 
E        127558243 nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        127550738 nuclear pore complex protein Nup93 isoform X1	K14309 NUP93; nuclear pore complex protein Nup93 
E        127555268 nuclear pore complex protein Nup98-Nup96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        127538678 nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        127559672 nuclear pore complex protein Nup133	K14300 NUP133; nuclear pore complex protein Nup133 
E        127550872 nucleoporin NUP188 isoform X1	K14311 NUP188; nuclear pore complex protein Nup188 
E        127544138 nuclear pore complex protein Nup153	K14296 NUP153; nuclear pore complex protein Nup153 
E        127556698 nuclear pore complex protein Nup155 isoform X1	K14312 NUP155; nuclear pore complex protein Nup155 
E        127539620 nuclear pore complex protein Nup160	K14303 NUP160; nuclear pore complex protein Nup160 
E        127554496 nucleoporin NUP35 isoform X1	K14313 NUP35; nuclear pore complex protein Nup53 
E        127539248 nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        127553213 LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        127559869 nuclear pore membrane glycoprotein 210-like	K14314 NUP210; nuclear pore complex protein Nup210 
E        127550909 nuclear pore complex protein Nup214 isoform X1	K14317 NUP214; nuclear pore complex protein Nup214 
E        127558666 nuclear envelope pore membrane protein POM 121C	K14316 POM121; nuclear pore complex protein Nup121 
E        127554740 nucleoporin p58/p45 isoform X1	K14307 NUPL1; nucleoporin p58/p45 
E        127538023 nucleoporin NUP42	K14321 NUPL2; nucleoporin-like protein 2 
E        127563294 nucleoporin NDC1 isoform X1	K14315 NDC1; nucleoporin NDC1 
E        127544048 nucleoporin SEH1 isoform X1	K14299 SEH1; nucleoporin SEH1 
E        127553514 E3 SUMO-protein ligase RanBP2-like isoform X1	K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
E        127563519 sentrin-specific protease 2 isoform X1	K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68] 
E        127538319 aladin isoform X1	K14320 AAAS; aladin 
E        127559587 centrin-3 isoform X1	K16466 CETN3; centrin-3 
E        127550856 mRNA export factor GLE1	K18723 GLE1; nucleoporin GLE1 
E        127541050 nuclear RNA export factor 1 isoform X1	K14284 NXF; nuclear RNA export factor 
E        127543153 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        127542544 NTF2-related export protein 2	K14285 NXT1_2; NTF2-related export protein 1/2 
E        127542896 NTF2-related export protein 2	K14285 NXT1_2; NTF2-related export protein 1/2 
E        127542903 NTF2-related export protein 2-like isoform X1	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        127545367 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        127551222 acidic leucine-rich nuclear phosphoprotein 32 family member A	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        127545306 acidic leucine-rich nuclear phosphoprotein 32 family member B-like isoform X1	K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B 
E        127560756 acidic leucine-rich nuclear phosphoprotein 32 family member B	K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B 
E        127545281 ELAV-like protein 1 isoform X1	K13088 ELAVL1; ELAV-like protein 1 
E        127538117 ELAV-like protein 2 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        127544772 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        127563338 ELAV-like protein 4 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        127550259 FAS-associated factor 2 isoform X1	K18726 FAF2; FAS-associated factor 2 
E        127540683 transitional endoplasmic reticulum ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        127549771 protein N-lysine methyltransferase METTL21D	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        127544781 transportin-2 isoform X1	K18727 TNPO2; transportin-2 
E        127548118 exportin-1 isoform X1	K14290 XPO1; exportin-1 
E        127548307 exportin-7 isoform X1	K18460 XPO7; exportin-7 
E        127546753 ran-binding protein 17	K24115 RANBP17; Ran-binding protein 17 
E        127538414 ran GTPase-activating protein 1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        127559009 TATA-binding protein-associated factor 2N	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      eIF4F and regulatory proteins
E        127541248 eukaryotic translation initiation factor 4E isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        127546920 eukaryotic translation initiation factor 4E type 1B	K03259 EIF4E; translation initiation factor 4E 
E        127563347 eukaryotic translation initiation factor 4E type 2 isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        127552927 eukaryotic initiation factor 4A-II isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        127560877 eukaryotic initiation factor 4A-I isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        127541519 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        127555753 eukaryotic translation initiation factor 4 gamma 3 isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        127563449 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1	K03260 EIF4G; translation initiation factor 4G 
E        127564044 eukaryotic translation initiation factor 4B isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        127558703 eukaryotic translation initiation factor 4H	K24086 EIF4H; translation initiation factor 4H 
E        127548228 eukaryotic translation initiation factor 4E-binding protein 1	K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
E        127552081 eukaryotic translation initiation factor 4E-binding protein 2	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        127545710 eukaryotic translation initiation factor 4E transporter isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        127549470 protein angel homolog 1 isoform X1	K18729 ANGEL; protein angel 
E        127562563 protein angel homolog 2 isoform X1	K18729 ANGEL; protein angel 
E        127543240 fragile X messenger ribonucleoprotein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        127552909 RNA-binding protein FXR1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        127560873 RNA-binding protein FXR2	K15516 FMR; fragile X mental retardation protein 
E        127550134 cytoplasmic FMR1-interacting protein 2	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        127553710 cytoplasmic FMR1-interacting protein 1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        127550125 gem-associated protein 5 isoform X1	K13133 GEMIN5; gem associated protein 5 
E        127540077 transforming acidic coiled-coil-containing protein 3	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        127541903 cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127550217 cytoplasmic polyadenylation element-binding protein 4 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127551692 cytoplasmic polyadenylation element-binding protein 3 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127551826 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127553913 ATP-dependent RNA helicase DDX3X isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        127560969 GRB10-interacting GYF protein 1 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        127563094 LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        127542606 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        127542880 polyadenylate-binding protein 1-like	K13126 PABPC; polyadenylate-binding protein 
E        127542946 LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like	K13126 PABPC; polyadenylate-binding protein 
E        127543259 uncharacterized protein LOC127543259	K13126 PABPC; polyadenylate-binding protein 
E        127544336 polyadenylate-binding protein 1	K13126 PABPC; polyadenylate-binding protein 
E        127548858 polyadenylate-binding protein 1-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        127555461 polyadenylate-binding protein 4	K13126 PABPC; polyadenylate-binding protein 
E        127557068 polyadenylate-binding protein-interacting protein 1 isoform X1	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        127547399 polyadenylate-binding protein-interacting protein 2B isoform X1	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        127549974 polyadenylate-binding protein-interacting protein 2 isoform X1	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        127561086 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        127542089 deformed epidermal autoregulatory factor 1 homolog isoform X1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        127541250 malignant T-cell-amplified sequence 1	K07575 MCTS; malignant T-cell-amplified sequence 
E        127545421 density-regulated protein	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
E        127564914 C->U-editing enzyme APOBEC-1	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        127552157 APOBEC1 complementation factor isoform X1	K24978 A1CF; APOBEC1 complementation factor 
D      Other transport factors
E        127539034 partner of Y14 and mago isoform X1	K14294 WIBG; partner of Y14 and mago 
E        127538084 heterogeneous nuclear ribonucleoprotein A1 isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        127554532 heterogeneous nuclear ribonucleoprotein A3 isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        127545118 DAZ-associated protein 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        127545554 RNA-binding protein Musashi homolog 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        127560002 RNA-binding protein Musashi homolog 2 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        127562240 HBS1-like protein isoform X1	K14416 HBS1; elongation factor 1 alpha-like protein 
E        127557244 protein pelota homolog	K06965 PELO; protein pelota 
E        127548657 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        127551052 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        127552360 embryonic polyadenylate-binding protein 2	K14396 PABPN1; polyadenylate-binding protein 2 
E        127547668 ATP-dependent RNA helicase DDX19B isoform X1	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        127554830 ATP-dependent RNA helicase DDX25 isoform X1	K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7] 
E        127545328 pre-mRNA-splicing factor SYF1	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        127564946 SAP domain-containing ribonucleoprotein isoform X1	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        127555600 regulator of chromosome condensation	K11493 RCC1; regulator of chromosome condensation 
E        127551211 LOW QUALITY PROTEIN: la-related protein 6	K18733 LARP6; la-related protein 6 
E        127549989 transcriptional activator protein Pur-alpha	K21772 PURA; transcriptional activator protein Pur-alpha 
E        127548820 transcriptional activator protein Pur-beta	K21799 PURB; transcriptional activator protein Pur-beta 
E        127538468 polymerase delta-interacting protein 3 isoform X1	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        127543343 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A-like	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        127544615 zinc finger CCCH domain-containing protein 11B-like	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        127547216 zinc finger CCCH domain-containing protein 11A-like	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        127561256 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A-like	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        127562683 zinc finger CCCH domain-containing protein 11A isoform X1	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        127556489 leukocyte receptor cluster member 8	K23802 LENG8; SAC3 family protein LENG8/THP3 
E        127549324 protein PAT1 homolog 2 isoform X1	K24823 PATL2; protein PAT1 homolog 2 
C    Surveillance factors
D      Surveillance complex
E        127549967 eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        127538984 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1	K03267 ERF3; peptide chain release factor subunit 3 
E        127542965 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        127542966 LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        127542967 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        127545177 LOW QUALITY PROTEIN: regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        127537938 regulator of nonsense transcripts 2 isoform X1	K14327 UPF2; regulator of nonsense transcripts 2 
E        127543036 regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        127553506 regulator of nonsense transcripts 3A isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        127539590 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        127539655 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        127549824 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        127554975 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        127556425 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        127540860 protein phosphatase 2, regulatory subunit B, gamma isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        127547333 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        127550069 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        127552220 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        127549749 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        127553699 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        127554225 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        127540094 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        127549612 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        127549900 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        127561763 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        127562576 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        127537783 serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        127547586 nonsense-mediated mRNA decay factor SMG5-like	K11125 SMG5; protein SMG5 
E        127559778 nonsense-mediated mRNA decay factor SMG5 isoform X1	K11125 SMG5; protein SMG5 
E        127558821 telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        127562811 nonsense-mediated mRNA decay factor SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        127559970 nonsense-mediated mRNA decay factor SMG8	K18734 SMG8; protein SMG8 
E        127556422 nonsense-mediated mRNA decay factor SMG9	K18735 SMG9; protein SMG9 
E        127560969 GRB10-interacting GYF protein 1 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        127563094 LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        127551130 selenocysteine insertion sequence-binding protein 2-like isoform X1	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        127562448 selenocysteine insertion sequence-binding protein 2 isoform X1	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        127556250 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        127538286 GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        127555586 pumilio homolog 3	K14844 PUF6; pumilio homology domain family member 6 
E        127543500 unconventional myosin-Vb	K10357 MYO5; myosin V 
E        127551164 unconventional myosin-Vc	K10357 MYO5; myosin V 
E        127551165 unconventional myosin-Va	K10357 MYO5; myosin V 
E        127538928 protein bicaudal D homolog 1 isoform X1	K18739 BICD; protein bicaudal D 
E        127542417 protein bicaudal D homolog 2-like isoform X1	K18739 BICD; protein bicaudal D 
E        127550163 protein bicaudal D homolog 2 isoform X1	K18739 BICD; protein bicaudal D 
E        127549253 piRNA biogenesis protein EXD1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
E        127542395 actin, cytoplasmic 1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        127547611 actin, cytoskeletal 4-like	K05692 ACTB_G1; actin beta/gamma 1 
E        127551984 actin, cytoplasmic type 5	K05692 ACTB_G1; actin beta/gamma 1 
E        127560651 actin, cytoplasmic 2	K05692 ACTB_G1; actin beta/gamma 1 
E        127563434 actin, cytoplasmic 1 isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        127544074 myelin basic protein isoform X1	K17269 MBP; myelin basic protein 
E        127539123 vimentin	K07606 VIM; vimentin 
E        127550734 metallothionein-1E-like	K14739 MT1_2; metallothionein 1/2 
E        127550735 metallothionein-1E-like	K14739 MT1_2; metallothionein 1/2 
E        127550736 metallothionein-1E-like	K14739 MT1_2; metallothionein 1/2 
E        127550737 metallothionein-2B-like	K14739 MT1_2; metallothionein 1/2 
E        127544452 myc proto-oncogene protein	K04377 MYC; Myc proto-oncogene protein 
E        127545185 embryonic growth/differentiation factor 1	K05495 GDF1; growth differentiation factor 1 
E        127556070 T-box transcription factor TBX6	K10180 TBX6; T-box protein 6 
E        127551634 nanos homolog 1	K18741 NANOS1; protein nanos 1 
D      Trans-acting binding proteins
E        127544870 far upstream element-binding protein 2	K13210 FUBP; far upstream element-binding protein 
E        127550905 far upstream element-binding protein 3 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        127563113 far upstream element-binding protein 1 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        127546710 elongation factor 1-alpha 1-like	K03231 EEF1A; elongation factor 1-alpha 
E        127549024 elongation factor 1-alpha 2	K03231 EEF1A; elongation factor 1-alpha 
E        127561912 elongation factor 1-alpha 1	K03231 EEF1A; elongation factor 1-alpha 
E        127539671 elongation factor 1-gamma	K03233 EEF1G; elongation factor 1-gamma 
E        127539333 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1	K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 
E        127559862 HCLS1-associated protein X-1	K16220 HAX1; HCLS1-associated protein X-1 
E        127553017 arf-GAP domain and FG repeat-containing protein 1 isoform X1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        127543764 double-stranded RNA-binding protein Staufen homolog 2	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        127548888 double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        127561596 LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 1-like	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        127538025 insulin-like growth factor 2 mRNA-binding protein 3	K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 
E        127545273 polypyrimidine tract-binding protein 1 isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        127541903 cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127550217 cytoplasmic polyadenylation element-binding protein 4 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127551692 cytoplasmic polyadenylation element-binding protein 3 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127551826 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        127543240 fragile X messenger ribonucleoprotein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        127552909 RNA-binding protein FXR1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        127560873 RNA-binding protein FXR2	K15516 FMR; fragile X mental retardation protein 
E        127550134 cytoplasmic FMR1-interacting protein 2	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        127553710 cytoplasmic FMR1-interacting protein 1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        127538040 poly(rC)-binding protein 2 isoform X1	K13162 PCBP2; poly(rC)-binding protein 2 
E        127554162 poly(rC)-binding protein 4 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        127562538 poly(rC)-binding protein 3 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        127541021 caprin-1 isoform X1	K18743 CAPRIN1; caprin-1 
E        127538926 caprin-2 isoform X1	K18744 CAPRIN2; caprin-2 
E        127555551 Y-box-binding protein 1 isoform X1	K09276 YBX1; Y-box-binding protein 1 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        127552992 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        127544495 protein argonaute-2	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        127555407 protein argonaute-4 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        127555408 protein argonaute-1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        127555412 protein argonaute-3	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        127541248 eukaryotic translation initiation factor 4E isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        127546920 eukaryotic translation initiation factor 4E type 1B	K03259 EIF4E; translation initiation factor 4E 
E        127563347 eukaryotic translation initiation factor 4E type 2 isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        127545177 LOW QUALITY PROTEIN: regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        127553913 ATP-dependent RNA helicase DDX3X isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        127543489 RNA-binding E3 ubiquitin-protein ligase MEX3C	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        127545176 RNA-binding protein MEX3D	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        127551443 RNA-binding protein MEX3B	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        127559795 RNA-binding protein MEX3A	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        127548987 protein LSM14 homolog B	K18749 LSM14; protein LSM14 
E        127550628 protein LSM14 homolog A isoform X1	K18749 LSM14; protein LSM14 
E        127538040 poly(rC)-binding protein 2 isoform X1	K13162 PCBP2; poly(rC)-binding protein 2 
E        127555551 Y-box-binding protein 1 isoform X1	K09276 YBX1; Y-box-binding protein 1 
E        127539087 LIM domain-containing protein 1	K16682 AJUBA; LIM domain-containing protein 
E        127550622 Wilms tumor protein 1-interacting protein	K16682 AJUBA; LIM domain-containing protein 
E        127551041 LIM domain-containing protein ajuba	K16682 AJUBA; LIM domain-containing protein 
E        127564914 C->U-editing enzyme APOBEC-1	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        127553391 single-stranded DNA cytosine deaminase-like	K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
E        127559313 helicase MOV-10 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        127555718 proline-rich nuclear receptor coactivator 2	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        127549672 LOW QUALITY PROTEIN: transportin-1-like	K18752 TNPO1; transportin-1 
E        127558965 transportin-1	K18752 TNPO1; transportin-1 
E        127537783 serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        127547586 nonsense-mediated mRNA decay factor SMG5-like	K11125 SMG5; protein SMG5 
E        127559778 nonsense-mediated mRNA decay factor SMG5 isoform X1	K11125 SMG5; protein SMG5 
E        127558821 telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        127562811 nonsense-mediated mRNA decay factor SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        127556133 mRNA decay activator protein ZFP36	K15308 TTP; tristetraprolin 
E        127548028 mRNA decay activator protein ZFP36L2 isoform X1	K18753 ZFP36L; butyrate response factor 
E        127549667 mRNA decay activator protein ZFP36L1	K18753 ZFP36L; butyrate response factor 
E        127558156 protein lin-28 homolog A	K18754 LIN28; protein lin-28 
E        127562041 protein lin-28 homolog B	K18754 LIN28; protein lin-28 
E        127540865 huntingtin	K04533 HD; huntingtin 
E        127538927 importin-8 isoform X1	K18755 IPO8; importin-8 
E        127552145 protein bicaudal C homolog 1 isoform X1	K18756 BICC1; protein bicaudal C 
E        127538084 heterogeneous nuclear ribonucleoprotein A1 isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        127554532 heterogeneous nuclear ribonucleoprotein A3 isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        127543087 cAMP-dependent protein kinase catalytic subunit alpha	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        127544835 cAMP-dependent protein kinase catalytic subunit alpha	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        127548938 cAMP-dependent protein kinase catalytic subunit alpha-like	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        127563015 cAMP-dependent protein kinase catalytic subunit beta isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        127541254 la-related protein 1B isoform X1	K18757 LARP1; la-related protein 1 
E        127550122 la-related protein 1 isoform X1	K18757 LARP1; la-related protein 1 
E        127545474 ataxin-2 isoform X1	K23625 ATXN2_2L; ataxin 2/2L 
E        127555902 ataxin-2-like protein isoform X1	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        127538412 m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        127550192 mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        127538076 mRNA-decapping enzyme 1B isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        127548235 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        127561075 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        127552480 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        127545223 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        127539865 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        127545142 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        127537993 LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        127539708 kinesin light chain 2	K10407 KLC; kinesin light chain 
E        127549873 kinesin light chain 1 isoform X1	K10407 KLC; kinesin light chain 
E        127556322 kinesin light chain 3 isoform X1	K10407 KLC; kinesin light chain 
E        127561764 kinesin light chain 4	K10407 KLC; kinesin light chain 
E        127543500 unconventional myosin-Vb	K10357 MYO5; myosin V 
E        127551164 unconventional myosin-Vc	K10357 MYO5; myosin V 
E        127551165 unconventional myosin-Va	K10357 MYO5; myosin V 
E        127538419 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        127538906 tubulin alpha-1A chain	K07374 TUBA; tubulin alpha 
E        127538907 tubulin alpha-1B chain isoform X1	K07374 TUBA; tubulin alpha 
E        127545775 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        127545800 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        127553080 tubulin alpha-1D chain isoform X1	K07374 TUBA; tubulin alpha 
E        127553081 tubulin alpha-4A chain	K07374 TUBA; tubulin alpha 
E        127562711 tubulin alpha-8 chain	K07374 TUBA; tubulin alpha 
E        127564084 tubulin alpha-1C chain	K07374 TUBA; tubulin alpha 
E        127564152 tubulin alpha-8 chain	K07374 TUBA; tubulin alpha 
E        127541903 cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127550217 cytoplasmic polyadenylation element-binding protein 4 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127551692 cytoplasmic polyadenylation element-binding protein 3 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127551826 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        127550125 gem-associated protein 5 isoform X1	K13133 GEMIN5; gem associated protein 5 
E        127540077 transforming acidic coiled-coil-containing protein 3	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        127538350 trinucleotide repeat-containing gene 6B protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        127542026 trinucleotide repeat-containing gene 6A protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        127560703 trinucleotide repeat-containing gene 6C protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        127547642 CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        127538035 CCR4-NOT transcription complex subunit 2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        127556497 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        127564907 CCR4-NOT transcription complex subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        127541259 CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        127550304 CCR4-NOT transcription complex subunit 6 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        127540671 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127542396 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127543232 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127543233 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127550126 CCR4-NOT transcription complex subunit 8 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127550619 granule associated Rac and RHOG effector protein 1 isoform X1	K26671 GARRE1; granule associated Rac and RHOG effector protein 1 
E        127563266 DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        127538094 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        127554718 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        127538423 LOW QUALITY PROTEIN: protein Tob2	K14443 TOB; protein Tob/BTG 
E        127547061 protein BTG2-like	K14443 TOB; protein Tob/BTG 
E        127554970 protein BTG4 isoform X1	K14443 TOB; protein Tob/BTG 
E        127560044 protein Tob1	K14443 TOB; protein Tob/BTG 
E        127562694 protein BTG2	K14443 TOB; protein Tob/BTG 
E        127564269 protein BTG1	K14443 TOB; protein Tob/BTG 
E        127545710 eukaryotic translation initiation factor 4E transporter isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        127539648 protein PAT1 homolog 1 isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        127551980 enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        127547881 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        127558193 nanos homolog 2	K18760 NANOS2; protein nanos 2 
E        127548105 nanos homolog 3	K18761 NANOS3; protein nanos 3 
E        127554042 nanos homolog 3-like	K18761 NANOS3; protein nanos 3 
E        127537938 regulator of nonsense transcripts 2 isoform X1	K14327 UPF2; regulator of nonsense transcripts 2 
E        127543036 regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        127553506 regulator of nonsense transcripts 3A isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        127564493 E3 ubiquitin-protein ligase TRIM71	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        127540298 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        127548654 interferon-induced, double-stranded RNA-activated protein kinase	K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1] 
E        127540070 zygote arrest protein 1 isoform X1	K18762 ZAR1; zygote arrest protein 1 
E        127554688 ZAR1-like protein	K18762 ZAR1; zygote arrest protein 1 
E        127543821 YTH domain-containing family protein 3 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        127549014 YTH domain-containing family protein 1 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        127555593 YTH domain-containing family protein 2	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        127548195 cytotoxic granule associated RNA binding protein TIA1 isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        127551642 nucleolysin TIAR isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        127542606 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        127542880 polyadenylate-binding protein 1-like	K13126 PABPC; polyadenylate-binding protein 
E        127542946 LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like	K13126 PABPC; polyadenylate-binding protein 
E        127543259 uncharacterized protein LOC127543259	K13126 PABPC; polyadenylate-binding protein 
E        127544336 polyadenylate-binding protein 1	K13126 PABPC; polyadenylate-binding protein 
E        127548858 polyadenylate-binding protein 1-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        127555461 polyadenylate-binding protein 4	K13126 PABPC; polyadenylate-binding protein 
E        127543764 double-stranded RNA-binding protein Staufen homolog 2	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        127548888 double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        127561596 LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 1-like	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        127543240 fragile X messenger ribonucleoprotein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        127552909 RNA-binding protein FXR1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        127560873 RNA-binding protein FXR2	K15516 FMR; fragile X mental retardation protein 
E        127545281 ELAV-like protein 1 isoform X1	K13088 ELAVL1; ELAV-like protein 1 
E        127544504 LOW QUALITY PROTEIN: ras GTPase-activating protein-binding protein 1-like	K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
E        127550114 ras GTPase-activating protein-binding protein 1 isoform X1	K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
E        127542100 ras GTPase-activating protein-binding protein 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        127552933 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        127563855 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        127552927 eukaryotic initiation factor 4A-II isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        127560877 eukaryotic initiation factor 4A-I isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        127545988 eukaryotic initiation factor 4A-III-like isoform X1	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        127560670 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        127564044 eukaryotic translation initiation factor 4B isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        127541519 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        127555753 eukaryotic translation initiation factor 4 gamma 3 isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        127563449 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1	K03260 EIF4G; translation initiation factor 4G 
E        127543067 ribosomal protein S6 kinase alpha-6 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        127553977 ribosomal protein S6 kinase alpha-3 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        127555638 ribosomal protein S6 kinase alpha-1 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        127562411 ribosomal protein S6 kinase alpha-2 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        127561002 receptor of activated protein C kinase 1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        127549124 TNF receptor-associated factor 2 isoform X1	K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
E        127541050 nuclear RNA export factor 1 isoform X1	K14284 NXF; nuclear RNA export factor 
E        127543153 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        127542451 histone deacetylase 6	K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
E        127553289 tudor domain-containing protein 3	K18404 TDRD3; tudor domain-containing protein 3 
E        127539426 la-related protein 4 isoform X1	K18763 LARP4; la-related protein 4 
E        127564543 la-related protein 4B isoform X1	K18763 LARP4; la-related protein 4 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        127550192 mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        127538076 mRNA-decapping enzyme 1B isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        127538412 m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        127551980 enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        127547881 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        127539648 protein PAT1 homolog 1 isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        127548235 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        127561075 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        127552480 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        127545223 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        127539865 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        127545142 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        127537993 LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        127552992 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        127548432 5'-3' exoribonuclease 2 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        127542371 U8 snoRNA-decapping enzyme	K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] 
D      Other 5'-3' decay factors
E        127554824 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        127560576 probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        127551752 exosome complex component CSL4 isoform X1	K07573 CSL4; exosome complex component CSL4 
E        127550906 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        127560935 exosome complex component RRP40	K03681 RRP40; exosome complex component RRP40 
E        127544621 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        127556232 exosome complex component RRP46	K12590 RRP46; exosome complex component RRP46 
E        127542710 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        127547670 exosome complex component MTR3	K12587 MTR3; exosome complex component MTR3 
E        127538235 exosome complex component RRP42 isoform X1	K12589 RRP42; exosome complex component RRP42 
E        127555241 exosome complex component RRP43	K12586 RRP43; exosome complex component RRP43 
E        127541196 exosome complex component RRP45	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        127553302 exosome complex exonuclease RRP44 isoform X1	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        127551243 DIS3-like exonuclease 1	K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] 
E        127555878 exosome component 10	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        127537851 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        127548154 nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        127548677 M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
E        127539794 probable ATP-dependent RNA helicase DDX60	K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] 
E        127541419 probable ATP-dependent RNA helicase DDX60	K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] 
D      TRAMP complex
E        127543610 terminal nucleotidyltransferase 4A isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        127550694 terminal nucleotidyltransferase 4B	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        127561013 zinc finger CCHC domain-containing protein 7	K12597 AIR1_2; protein AIR1/2 
E        127557445 exosome RNA helicase MTR4	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        127561086 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        127559810 tetratricopeptide repeat protein 37 isoform X1	K12600 SKI3; superkiller protein 3 
E        127552047 WD repeat-containing protein 61 isoform X1	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        127541259 CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        127550304 CCR4-NOT transcription complex subunit 6 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        127547642 CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        127538035 CCR4-NOT transcription complex subunit 2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        127556497 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        127564907 CCR4-NOT transcription complex subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        127540671 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127542396 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127543232 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127543233 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127550126 CCR4-NOT transcription complex subunit 8 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        127553105 CCR4-NOT transcription complex subunit 9	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        127539216 CCR4-NOT transcription complex subunit 10 isoform X1	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        127538094 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        127554718 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        127539172 poly(A)-specific ribonuclease PARN	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        127562382 poly(A)-specific ribonuclease PNLDC1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        127558400 ATP-dependent DNA/RNA helicase DHX36	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        127538423 LOW QUALITY PROTEIN: protein Tob2	K14443 TOB; protein Tob/BTG 
E        127547061 protein BTG2-like	K14443 TOB; protein Tob/BTG 
E        127554970 protein BTG4 isoform X1	K14443 TOB; protein Tob/BTG 
E        127560044 protein Tob1	K14443 TOB; protein Tob/BTG 
E        127562694 protein BTG2	K14443 TOB; protein Tob/BTG 
E        127564269 protein BTG1	K14443 TOB; protein Tob/BTG 
E        127540638 nocturnin isoform X1	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        127539731 3'-5' exoribonuclease 1	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        127564669 LOW QUALITY PROTEIN: ERI1 exoribonuclease 2	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        127554824 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        127550489 2',5'-phosphodiesterase 12	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        127552051 iron-responsive element-binding protein 2	K22416 IREB2; iron-responsive element-binding protein 2 
E        127560576 probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        127549028 helicase with zinc finger domain 2 isoform X1	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        127549406 nuclear exosome regulator NRDE2 isoform X1	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        127549782 protein Smaug homolog 1 isoform X1	K27396 SMG; protein Smaug 
E        127556131 protein Smaug homolog 2	K27396 SMG; protein Smaug 
E        127560636 focadhesin	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        127549133 inactive ribonuclease-like protein 9	K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18] 
E        127551007 ribonuclease pancreatic-like isoform X1	K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18] 
E        127546585 seminal ribonuclease-like	K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-] 
E        127546586 seminal ribonuclease-like	K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-] 
E        127549136 ribonuclease 4-like	K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-] 
E        127551006 ribonuclease 8-like	K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-] 
E        127543026 probable ribonuclease ZC3H12B	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        127555432 endoribonuclease ZC3H12A	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        127557352 probable ribonuclease ZC3H12C	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        127562313 probable ribonuclease ZC3H12D	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        127543665 ribonuclease 3 isoform X1	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        127555012 oligoribonuclease, mitochondrial	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        127539235 gamma-enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        127555910 alpha-enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        127555911 enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        127557899 LOW QUALITY PROTEIN: alpha-enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        127560942 beta-enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        127562159 alpha-enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        127548098 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        127537829 ATP-dependent 6-phosphofructokinase, muscle type	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        127538403 ATP-dependent 6-phosphofructokinase, platelet type isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        127562454 ATP-dependent 6-phosphofructokinase, liver type	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        127549966 stress-70 protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        127554434 60 kDa heat shock protein, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        127550906 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        127551752 exosome complex component CSL4 isoform X1	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        127544621 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        127538235 exosome complex component RRP42 isoform X1	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: August 27, 2025