+D GENES KO
#
KEGG Orthology (KO) - Actinomyces graevenitzii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:agh00010]
D M3I41_06155 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D M3I41_08780 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_04505 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D M3I41_03720 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D M3I41_01025 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M3I41_04700 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M3I41_04710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M3I41_04705 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D M3I41_08835 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M3I41_08120 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M3I41_03850 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M3I41_07850 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D M3I41_06395 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M3I41_04800 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_05170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_05090 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D M3I41_07495 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D M3I41_01165 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D M3I41_03360 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:agh00020]
D M3I41_02915 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_03025 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D M3I41_03020 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M3I41_07425 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M3I41_07420 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M3I41_07430 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M3I41_03315 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D M3I41_03070 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D M3I41_01165 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D M3I41_06395 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M3I41_04800 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:agh00030]
D M3I41_08780 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M3I41_04415 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D M3I41_01690 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D M3I41_07305 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D M3I41_01670 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D M3I41_03375 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D M3I41_01040 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_08215 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D M3I41_01025 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_04505 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D M3I41_03720 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:agh00040]
D M3I41_04115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D M3I41_01400 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D M3I41_04415 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D M3I41_01405 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
C 00051 Fructose and mannose metabolism [PATH:agh00051]
D M3I41_02180 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D M3I41_02670 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D M3I41_06885 sugar phosphate nucleotidyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_04505 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D M3I41_03720 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D M3I41_01025 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M3I41_04700 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M3I41_01670 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D M3I41_03375 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:agh00052]
D M3I41_06915 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D M3I41_02440 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D M3I41_04115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_06155 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D M3I41_08805 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_04505 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
D M3I41_01400 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:agh00500]
D M3I41_04525 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D M3I41_04115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D M3I41_03630 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D M3I41_03125 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D M3I41_03120 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D M3I41_02030 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D M3I41_03335 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D M3I41_03135 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D M3I41_03635 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D M3I41_03360 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D M3I41_04745 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D M3I41_06365 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_06155 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D M3I41_08780 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M3I41_02180 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:agh00520]
D M3I41_03360 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D M3I41_03350 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D M3I41_06980 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D M3I41_06130 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D M3I41_02180 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D M3I41_07465 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D M3I41_07475 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D M3I41_08220 sugar phosphate nucleotidyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D M3I41_05140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D M3I41_02235 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D M3I41_06150 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D M3I41_02505 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D M3I41_02470 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D M3I41_06155 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D M3I41_05090 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D M3I41_07495 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_04115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D M3I41_06915 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D M3I41_02440 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D M3I41_08780 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M3I41_02670 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D M3I41_06885 sugar phosphate nucleotidyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D M3I41_03630 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:agh00620]
D M3I41_06395 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M3I41_04800 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_04770 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D M3I41_07355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D M3I41_07350 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D M3I41_03850 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M3I41_04420 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D M3I41_06955 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D M3I41_05170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D M3I41_04595 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D M3I41_06690 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D M3I41_07100 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D M3I41_03070 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D M3I41_03315 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D M3I41_01165 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D M3I41_08990 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D M3I41_07850 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D M3I41_05255 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:agh00630]
D M3I41_03070 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D M3I41_04425 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D M3I41_04420 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D M3I41_02135 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_04840 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_05075 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_06970 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_02915 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:agh00640]
D M3I41_07355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D M3I41_07350 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_04770 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D M3I41_04420 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D M3I41_04425 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D M3I41_03020 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M3I41_03025 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D M3I41_07275 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D M3I41_05170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:agh00650]
D M3I41_07425 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M3I41_07420 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M3I41_07430 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M3I41_04770 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D M3I41_05335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M3I41_05330 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:agh00660]
D M3I41_05335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M3I41_05330 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D M3I41_03020 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M3I41_03025 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:agh00562]
D M3I41_07310 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D M3I41_07340 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D M3I41_07280 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D M3I41_07285 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D M3I41_07295 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D M3I41_07275 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D M3I41_04700 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:agh00190]
D M3I41_01740 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D M3I41_01745 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D M3I41_01750 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D M3I41_01755 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D M3I41_01760 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D M3I41_01765 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D M3I41_01770 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D M3I41_01775 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D M3I41_01780 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D M3I41_01790 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D M3I41_01795 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D M3I41_01800 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D M3I41_01805 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D M3I41_07425 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M3I41_07420 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M3I41_07430 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M3I41_03210 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D M3I41_03205 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D M3I41_07010 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D M3I41_07000 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D M3I41_07005 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D M3I41_07030 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D M3I41_07025 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D M3I41_07825 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D M3I41_01375 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:agh00680]
D M3I41_06970 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M3I41_08120 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M3I41_03070 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D M3I41_01025 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_04505 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D M3I41_07355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D M3I41_07350 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D M3I41_08835 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:agh00910]
D M3I41_02875 multicopper oxidase domain-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D M3I41_01230 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D M3I41_02135 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_04840 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_05075 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_06895 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:agh00920]
D M3I41_03390 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D M3I41_03395 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D M3I41_02035 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D M3I41_00710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:agh00061]
D M3I41_04420 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D M3I41_06410 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D M3I41_04430 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D M3I41_06415 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D M3I41_03615 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D M3I41_03510 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D M3I41_03510 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:agh00561]
D M3I41_01620 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D M3I41_06585 HAD hydrolase-like protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D M3I41_03715 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:agh00564]
D M3I41_01615 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D M3I41_03715 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D M3I41_05610 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D M3I41_04160 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D M3I41_05240 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D M3I41_00855 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D M3I41_04560 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:agh00600]
D M3I41_00180 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:agh00230]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_08215 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D M3I41_01240 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D M3I41_01180 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D M3I41_01210 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D M3I41_01195 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D M3I41_01200 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D M3I41_01245 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D M3I41_02430 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D M3I41_02435 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D M3I41_01185 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D M3I41_00465 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D M3I41_03035 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D M3I41_04225 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D M3I41_05390 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D M3I41_01030 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D M3I41_07805 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D M3I41_07385 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D M3I41_03545 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D M3I41_06100 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D M3I41_07245 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D M3I41_04380 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D M3I41_08915 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D M3I41_07925 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D M3I41_06455 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D M3I41_04235 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D M3I41_08105 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D M3I41_01045 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D M3I41_00700 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D M3I41_07570 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D M3I41_04155 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D M3I41_06895 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:agh00240]
D M3I41_04360 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D M3I41_04365 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D M3I41_06475 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D M3I41_01010 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D M3I41_04370 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D M3I41_05620 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D M3I41_03545 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D M3I41_02395 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D M3I41_06540 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D M3I41_01030 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D M3I41_08870 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D M3I41_04355 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D M3I41_00375 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D M3I41_07925 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D M3I41_00960 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D M3I41_08915 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D M3I41_06750 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:agh00250]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D M3I41_08370 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D M3I41_06400 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D M3I41_01045 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D M3I41_00465 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D M3I41_04360 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D M3I41_01230 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D M3I41_02135 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_04840 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_05075 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_01200 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D M3I41_07465 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D M3I41_01240 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:agh00260]
D M3I41_08490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D M3I41_08485 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M3I41_02975 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D M3I41_02985 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D M3I41_02980 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D M3I41_06970 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M3I41_08835 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M3I41_00320 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D M3I41_00325 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_08945 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D M3I41_07990 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D M3I41_05980 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D M3I41_05975 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:agh00270]
D M3I41_03390 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D M3I41_03395 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D M3I41_01465 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D M3I41_06670 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D M3I41_04395 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D M3I41_05390 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D M3I41_01940 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D M3I41_00155 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D M3I41_08490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D M3I41_08485 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M3I41_02975 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D M3I41_02035 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D M3I41_00710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D M3I41_05320 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D M3I41_05170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D M3I41_03070 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D M3I41_08945 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:agh00280]
D M3I41_05320 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_04425 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D M3I41_04420 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D M3I41_07275 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:agh00290]
D M3I41_07990 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D M3I41_05335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M3I41_05330 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D M3I41_05325 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D M3I41_07995 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D M3I41_05320 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M3I41_05255 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:agh00300]
D M3I41_02975 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D M3I41_08490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D M3I41_08485 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M3I41_06160 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D M3I41_09025 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D M3I41_05435 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D M3I41_05430 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:agh00220]
D M3I41_06900 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D M3I41_06905 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D M3I41_01200 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D M3I41_02135 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_04840 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_05075 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_06895 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D M3I41_01230 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:agh00330]
D M3I41_00375 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:agh00400]
D M3I41_03725 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D M3I41_04335 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D M3I41_02890 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D M3I41_04330 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D M3I41_05960 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D M3I41_05965 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D M3I41_05970 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D M3I41_03840 indole-3-glycerol-phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D M3I41_05980 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D M3I41_05975 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D M3I41_03460 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D M3I41_04675 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D M3I41_07715 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:agh00410]
D M3I41_07725 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D M3I41_07730 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D M3I41_07275 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:agh00430]
D M3I41_07350 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D M3I41_07355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:agh00450]
D M3I41_00710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D M3I41_01465 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D M3I41_06670 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D M3I41_06505 aminotransferase class V-fold PLP-dependent enzyme K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D M3I41_09015 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D M3I41_08305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:agh00460]
D M3I41_08370 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D M3I41_06970 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:agh00470]
D M3I41_07455 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D M3I41_05130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_09030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_01200 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D M3I41_05420 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:agh00480]
D M3I41_00540 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D M3I41_04790 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D M3I41_03365 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D M3I41_04565 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:agh00511]
D M3I41_00180 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:agh00541]
D M3I41_04115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D M3I41_02440 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D M3I41_02665 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02960 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02565 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D M3I41_02615 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D M3I41_02670 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D M3I41_06885 sugar phosphate nucleotidyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D M3I41_08220 sugar phosphate nucleotidyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D M3I41_02505 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D M3I41_02470 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:agh00550]
D M3I41_05140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D M3I41_02235 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D M3I41_05405 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D M3I41_05420 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D M3I41_05435 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D M3I41_05130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_09030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_05430 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D M3I41_05245 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D M3I41_02855 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D M3I41_05425 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D M3I41_05410 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D M3I41_00105 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D M3I41_00815 MurT ligase domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D M3I41_00810 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:agh00552]
D M3I41_02855 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:agh00543]
D M3I41_03390 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:agh00730]
D M3I41_04775 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D M3I41_05125 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D M3I41_02885 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D M3I41_07570 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:agh00740]
D M3I41_05535 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:agh00750]
D M3I41_08950 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D M3I41_02980 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:agh00760]
D M3I41_06115 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D M3I41_03250 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D M3I41_08600 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D M3I41_05235 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D M3I41_08325 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D M3I41_06575 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:agh00770]
D M3I41_05335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M3I41_05330 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D M3I41_05325 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D M3I41_07995 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D M3I41_05080 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D M3I41_07730 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D M3I41_07470 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D M3I41_04390 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D M3I41_03160 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D M3I41_04435 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D M3I41_05320 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M3I41_07725 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:agh00780]
D M3I41_06415 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D M3I41_03615 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00785 Lipoic acid metabolism [PATH:agh00785]
D M3I41_04825 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D M3I41_04830 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_06395 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M3I41_04800 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D M3I41_02915 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00790 Folate biosynthesis [PATH:agh00790]
D M3I41_07795 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D M3I41_07790 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D M3I41_03525 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D M3I41_02860 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D M3I41_08560 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:agh00670]
D M3I41_05210 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D M3I41_06965 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D M3I41_06970 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M3I41_03035 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D M3I41_04405 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D M3I41_06750 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D M3I41_01470 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D M3I41_08565 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:agh00860]
D M3I41_06025 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M3I41_00735 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D M3I41_00740 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D M3I41_00750 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D M3I41_00760 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D M3I41_00770 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:agh00130]
D M3I41_01735 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D M3I41_01715 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D M3I41_01705 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D M3I41_01700 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:agh00900]
D M3I41_04775 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D M3I41_05595 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D M3I41_08825 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D M3I41_08820 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D M3I41_05585 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D M3I41_02195 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D M3I41_02170 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D M3I41_05245 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D M3I41_01690 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:agh00523]
D M3I41_02665 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02960 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02565 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D M3I41_02615 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D M3I41_02565 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:agh00261]
D M3I41_08490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D M3I41_08485 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M3I41_06160 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:agh00521]
D M3I41_06155 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D M3I41_00435 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M3I41_07310 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D M3I41_02665 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02960 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02565 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D M3I41_02615 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D M3I41_06155 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:agh00525]
D M3I41_02665 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02960 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D M3I41_02565 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:agh00401]
D M3I41_04675 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D M3I41_05960 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D M3I41_05965 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D M3I41_03615 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D M3I41_06410 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D M3I41_04395 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D M3I41_06955 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:agh03020]
D M3I41_02320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D M3I41_02325 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D M3I41_07540 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D M3I41_04385 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:agh03010]
D M3I41_03875 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D M3I41_05630 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D M3I41_07645 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D M3I41_04305 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D M3I41_07590 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D M3I41_08980 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D M3I41_07705 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D M3I41_07605 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D M3I41_07480 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D M3I41_07680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D M3I41_07545 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D M3I41_07710 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D M3I41_07550 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D M3I41_07610 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D M3I41_05525 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D M3I41_05705 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D M3I41_07630 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D M3I41_08970 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D M3I41_07655 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D M3I41_05770 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D M3I41_02275 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D M3I41_07660 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D M3I41_07675 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D M3I41_07670 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D M3I41_07615 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D M3I41_07600 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D M3I41_02290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D M3I41_08965 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D M3I41_02285 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D M3I41_02270 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D M3I41_07485 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D M3I41_07625 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D M3I41_07580 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D M3I41_07640 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D M3I41_07535 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D M3I41_07595 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D M3I41_05685 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D M3I41_06635 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D M3I41_03220 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D M3I41_07650 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D M3I41_07665 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D M3I41_07620 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D M3I41_08015 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D M3I41_03225 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D M3I41_03140 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D M3I41_07635 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D M3I41_07585 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D M3I41_02995 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D M3I41_03410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D M3I41_02225 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D M3I41_09110 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D M3I41_06640 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D M3I41_07555 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D M3I41_08350 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:agh00970]
D M3I41_08550 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_00045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_03270 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_03275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_02950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_00340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_08665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_06285 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_06430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D M3I41_01275 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D M3I41_04130 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D M3I41_06020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D M3I41_08225 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D M3I41_01270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M3I41_06010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M3I41_06015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M3I41_00955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_04125 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_04740 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_03415 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_06290 tRNA-His K14226 tRNA-His; tRNA His
D M3I41_00040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D M3I41_00130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M3I41_04885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M3I41_06090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M3I41_06070 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M3I41_01365 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M3I41_06075 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M3I41_02220 tRNA-Met K14230 tRNA-Met; tRNA Met
D M3I41_03285 tRNA-Met K14230 tRNA-Met; tRNA Met
D M3I41_01280 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D M3I41_03420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M3I41_00530 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M3I41_04665 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M3I41_08845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M3I41_08380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M3I41_02215 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M3I41_02255 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D M3I41_04135 tRNA-Val K14237 tRNA-Val; tRNA Val
D M3I41_04735 tRNA-Val K14237 tRNA-Val; tRNA Val
D M3I41_04120 tRNA-Val K14237 tRNA-Val; tRNA Val
D M3I41_06025 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M3I41_06700 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D M3I41_06695 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D M3I41_06705 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D M3I41_04310 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D M3I41_04285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M3I41_05825 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D M3I41_04150 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D M3I41_00390 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D M3I41_08815 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D M3I41_08305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D M3I41_04405 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D M3I41_03515 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D M3I41_05805 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M3I41_06000 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M3I41_07720 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M3I41_02970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M3I41_05575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D M3I41_04250 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D M3I41_06625 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D M3I41_06620 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D M3I41_06610 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M3I41_06370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:agh03060]
D M3I41_07575 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M3I41_02260 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M3I41_04695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M3I41_04215 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D M3I41_04220 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D M3I41_09095 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M3I41_06810 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M3I41_05735 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D M3I41_03550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M3I41_04470 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D M3I41_05365 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:agh04122]
D M3I41_06350 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D M3I41_02860 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
C 03050 Proteasome
D M3I41_03810 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:agh03018]
D M3I41_03215 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D M3I41_08120 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M3I41_05520 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D M3I41_02990 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D M3I41_06005 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_00615 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M3I41_08750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M3I41_01375 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D M3I41_08995 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:agh03030]
D M3I41_03710 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_07370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_05355 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M3I41_01320 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M3I41_05775 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M3I41_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M3I41_08960 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D M3I41_06450 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D M3I41_08975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M3I41_05675 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D M3I41_06715 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:agh03410]
D M3I41_08760 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D M3I41_03180 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D M3I41_00980 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D M3I41_06950 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D M3I41_06715 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:agh03420]
D M3I41_08140 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D M3I41_04110 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D M3I41_07195 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D M3I41_04065 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D M3I41_04730 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D M3I41_03010 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D M3I41_06325 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D M3I41_06715 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:agh03430]
D M3I41_03010 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D M3I41_06325 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D M3I41_02190 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D M3I41_02185 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D M3I41_08975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M3I41_05355 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M3I41_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M3I41_05775 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M3I41_01320 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M3I41_03710 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_07370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_06715 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:agh03440]
D M3I41_08975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M3I41_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D M3I41_05250 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D M3I41_08495 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D M3I41_05220 recA; recombinase RecA K03553 recA; recombination protein RecA
D M3I41_04200 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D M3I41_04205 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D M3I41_04195 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D M3I41_03150 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D M3I41_05355 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M3I41_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M3I41_05775 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M3I41_01320 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M3I41_03710 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_07370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:agh03250]
D M3I41_00060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:agh02010]
D M3I41_00660 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D M3I41_00665 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D M3I41_03310 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D M3I41_03295 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D M3I41_03300 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D M3I41_03290 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D M3I41_08790 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D M3I41_03080 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D M3I41_03085 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D M3I41_08875 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D M3I41_08880 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D M3I41_08885 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D M3I41_08620 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D M3I41_02350 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D M3I41_02355 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D M3I41_02360 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D M3I41_01590 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D M3I41_01595 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D M3I41_01655 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D M3I41_01600 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D M3I41_05835 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D M3I41_05845 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D M3I41_05840 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D M3I41_06255 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D M3I41_06260 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D M3I41_09050 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D M3I41_09040 ATP-binding cassette domain-containing protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D M3I41_07410 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D M3I41_07405 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D M3I41_03195 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D M3I41_03200 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:agh02060]
D M3I41_03330 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D M3I41_07365 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D M3I41_03360 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D M3I41_03350 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D M3I41_04525 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D M3I41_03675 glucose PTS transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:agh03070]
D M3I41_04215 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D M3I41_04220 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D M3I41_02260 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M3I41_04695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M3I41_07575 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M3I41_09095 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M3I41_06810 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M3I41_03550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M3I41_05735 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D M3I41_04470 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:agh02020]
D M3I41_01725 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D M3I41_06835 mtrA; MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D M3I41_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D M3I41_06690 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D M3I41_07100 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D M3I41_01325 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D M3I41_05725 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D M3I41_03190 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D M3I41_03185 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D M3I41_00570 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D M3I41_02135 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_04840 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_05075 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_00505 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D M3I41_03210 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D M3I41_03205 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D M3I41_02505 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:agh02024]
D M3I41_00155 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D M3I41_05960 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D M3I41_05965 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D M3I41_03725 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D M3I41_03510 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D M3I41_00505 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D M3I41_08620 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D M3I41_06175 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D M3I41_08630 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D M3I41_06170 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D M3I41_08635 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D M3I41_06165 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D M3I41_09095 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M3I41_02260 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M3I41_04695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M3I41_07575 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M3I41_06810 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M3I41_03550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M3I41_05735 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D M3I41_03745 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D M3I41_08120 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D M3I41_08620 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance [PATH:agh01502]
D M3I41_05130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_09030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_07455 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D M3I41_05430 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D M3I41_05425 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D M3I41_05410 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D M3I41_00060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:agh01000]
C 01001 Protein kinases [BR:agh01001]
D M3I41_00095 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D M3I41_00100 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D M3I41_03190 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D M3I41_06730 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:agh01009]
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_08645 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D M3I41_00115 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:agh01002]
D M3I41_05365 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D M3I41_07245 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D M3I41_01240 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D M3I41_07465 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D M3I41_03365 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D M3I41_04565 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D M3I41_03775 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D M3I41_03370 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D M3I41_04790 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D M3I41_05085 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D M3I41_07565 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D M3I41_02745 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D M3I41_07800 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D M3I41_02200 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D M3I41_01725 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D M3I41_03445 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D M3I41_03450 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D M3I41_05165 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
C 01003 Glycosyltransferases [BR:agh01003]
D M3I41_04495 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D M3I41_04170 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D M3I41_05150 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D M3I41_03635 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D M3I41_02455 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:agh01011]
D M3I41_05140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D M3I41_02235 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D M3I41_05405 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D M3I41_05420 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D M3I41_05435 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D M3I41_05130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_09030 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M3I41_07455 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D M3I41_05425 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D M3I41_05410 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D M3I41_02855 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D M3I41_00105 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
C 01004 Lipid biosynthesis proteins [BR:agh01004]
D M3I41_04430 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D M3I41_06415 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D M3I41_03615 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D M3I41_03510 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D M3I41_03715 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:agh01006]
D M3I41_02170 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D M3I41_05245 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D M3I41_05195 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D M3I41_01700 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:agh01007]
D M3I41_06025 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M3I41_06610 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M3I41_06370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D M3I41_08815 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D M3I41_02970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M3I41_08305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D M3I41_03515 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D M3I41_05805 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M3I41_06000 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M3I41_07720 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M3I41_04285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M3I41_04250 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D M3I41_05825 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D M3I41_00390 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D M3I41_05575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D M3I41_04150 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D M3I41_04310 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D M3I41_06625 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D M3I41_06620 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D M3I41_02250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D M3I41_00320 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D M3I41_00735 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D M3I41_05320 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:agh00194]
D M3I41_07000 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D M3I41_07005 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D M3I41_07010 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D M3I41_07025 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D M3I41_07030 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:agh03000]
D M3I41_01940 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D M3I41_03245 DeoR/GlpR family DNA-binding transcription regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D M3I41_00630 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D M3I41_05850 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D M3I41_00505 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D M3I41_07775 metalloregulator ArsR/SmtB family transcription factor K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D M3I41_05230 helix-turn-helix domain-containing protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D M3I41_08680 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D M3I41_03605 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D M3I41_00515 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D M3I41_02685 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D M3I41_06725 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D M3I41_09070 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D M3I41_08830 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D M3I41_06615 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D M3I41_05295 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D M3I41_04355 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D M3I41_05155 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D M3I41_05455 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:agh03021]
D M3I41_07540 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D M3I41_02320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D M3I41_02325 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D M3I41_04385 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D M3I41_03745 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D M3I41_02900 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D M3I41_05560 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D M3I41_04350 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D M3I41_02265 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D M3I41_02160 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D M3I41_02990 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:agh03019]
D M3I41_03215 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D M3I41_03175 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D M3I41_06005 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D M3I41_06295 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D M3I41_08120 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M3I41_05520 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D M3I41_02990 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D M3I41_03015 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M3I41_00615 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M3I41_08750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M3I41_01375 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D M3I41_08995 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D M3I41_04725 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D M3I41_04485 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D M3I41_00870 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D M3I41_04590 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:agh03011]
D M3I41_03875 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D M3I41_05630 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D M3I41_07645 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D M3I41_04305 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D M3I41_07590 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D M3I41_08980 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D M3I41_07705 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D M3I41_07605 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D M3I41_07480 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D M3I41_07680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D M3I41_07545 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D M3I41_07710 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D M3I41_07550 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D M3I41_07610 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D M3I41_05525 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D M3I41_05705 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D M3I41_07630 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D M3I41_08970 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D M3I41_07655 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D M3I41_05770 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D M3I41_02275 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D M3I41_07660 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D M3I41_07675 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D M3I41_07670 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D M3I41_07615 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D M3I41_07600 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D M3I41_08965 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D M3I41_02285 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D M3I41_02270 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D M3I41_02290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D M3I41_07485 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D M3I41_07625 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D M3I41_07580 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D M3I41_07640 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D M3I41_07535 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D M3I41_07595 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D M3I41_05685 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D M3I41_06635 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D M3I41_03220 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D M3I41_07650 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D M3I41_07665 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D M3I41_07620 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D M3I41_03225 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D M3I41_03140 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D M3I41_07635 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D M3I41_07585 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D M3I41_02995 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D M3I41_03410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D M3I41_02225 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D M3I41_09110 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D M3I41_06640 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D M3I41_07555 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D M3I41_08015 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D M3I41_08350 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:agh03009]
D M3I41_03175 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D M3I41_06295 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D M3I41_05260 era; GTPase Era K03595 era; GTPase
D M3I41_03230 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D M3I41_05560 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D M3I41_04350 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D M3I41_02265 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D M3I41_04410 rRNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D M3I41_03155 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D M3I41_05285 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D M3I41_09085 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D M3I41_05450 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D M3I41_08330 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D M3I41_06580 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D M3I41_08810 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D M3I41_05605 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D M3I41_08535 methyltransferase domain-containing protein K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D M3I41_04680 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D M3I41_05360 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D M3I41_07435 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D M3I41_05695 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D M3I41_03215 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D M3I41_04315 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D M3I41_02885 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D M3I41_04670 der; bifunctional cytidylate kinase/GTPase Der K03977 engA; GTPase
D M3I41_05180 hflX; GTPase HflX K03665 hflX; GTPase
D M3I41_07045 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D M3I41_04235 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D M3I41_05350 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D M3I41_03260 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D M3I41_05270 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D M3I41_01830 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D M3I41_03170 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:agh03016]
D M3I41_06025 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M3I41_05575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D M3I41_05805 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M3I41_08305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D M3I41_02970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M3I41_06000 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M3I41_07720 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M3I41_04285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M3I41_04310 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D M3I41_05825 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D M3I41_04150 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D M3I41_00390 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D M3I41_08815 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D M3I41_03515 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D M3I41_04250 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D M3I41_06625 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D M3I41_06620 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D M3I41_06610 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M3I41_06370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D M3I41_07865 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D M3I41_03610 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D M3I41_03805 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D M3I41_07490 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D M3I41_05545 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D M3I41_07045 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D M3I41_05195 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D M3I41_09105 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D M3I41_06095 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D M3I41_04755 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D M3I41_06055 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D M3I41_08865 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D M3I41_05205 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D M3I41_04935 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D M3I41_06630 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D M3I41_06350 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D M3I41_07440 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D M3I41_07415 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D M3I41_07450 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D M3I41_05520 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:agh03012]
D M3I41_05555 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D M3I41_06645 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D M3I41_05625 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D M3I41_07695 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D M3I41_07700 fusA; elongation factor G K02355 fusA; elongation factor G
D M3I41_03000 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D M3I41_05615 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D M3I41_03005 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D M3I41_08010 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D M3I41_07560 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D M3I41_04345 efp; elongation factor P K02356 efp; elongation factor P
D M3I41_06760 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D M3I41_07105 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:agh03110]
D M3I41_00825 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D M3I41_07855 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D M3I41_03455 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D M3I41_08645 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D M3I41_00615 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M3I41_08750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M3I41_00625 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D M3I41_05290 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D M3I41_04575 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D M3I41_07390 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D M3I41_07800 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D M3I41_07030 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D M3I41_00060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D M3I41_09020 trxA; thioredoxin K03671 TXN; thioredoxin
D M3I41_03115 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:agh04131]
D M3I41_03545 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D M3I41_04710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M3I41_08835 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M3I41_03850 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M3I41_08645 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:agh04121]
D M3I41_03820 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:agh03051]
D M3I41_08645 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D M3I41_03810 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D M3I41_03825 proteasome accessory factor PafA2 family protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
C 03032 DNA replication proteins [BR:agh03032]
D M3I41_01940 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D M3I41_06145 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D M3I41_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D M3I41_08960 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D M3I41_06450 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D M3I41_08975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M3I41_05355 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M3I41_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M3I41_05775 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M3I41_01320 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M3I41_03710 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_07370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_05675 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D M3I41_06715 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D M3I41_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D M3I41_05040 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D M3I41_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D M3I41_03755 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D M3I41_01310 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:agh03036]
D M3I41_01940 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D M3I41_03175 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D M3I41_08840 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D M3I41_06145 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D M3I41_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D M3I41_05795 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D M3I41_06260 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D M3I41_05990 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D M3I41_06255 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D M3I41_05395 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D M3I41_05385 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D M3I41_04685 ParA family protein K03496 parA; chromosome partitioning protein
D M3I41_09075 AAA family ATPase K03496 parA; chromosome partitioning protein
D M3I41_09070 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D M3I41_09085 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D M3I41_05645 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D M3I41_04690 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D M3I41_02730 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D M3I41_07190 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D M3I41_07095 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D M3I41_04715 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:agh03400]
D M3I41_08760 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D M3I41_01920 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D M3I41_08260 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D M3I41_03180 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D M3I41_00980 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D M3I41_06950 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D M3I41_06715 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D M3I41_04110 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D M3I41_07195 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D M3I41_04065 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D M3I41_04730 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D M3I41_03010 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D M3I41_06325 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D M3I41_02320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D M3I41_02325 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D M3I41_07540 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D M3I41_04385 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D M3I41_08140 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D M3I41_02190 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D M3I41_02185 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D M3I41_05355 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M3I41_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M3I41_05775 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M3I41_01320 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M3I41_03710 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_07370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M3I41_08975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M3I41_05220 recA; recombinase RecA K03553 recA; recombination protein RecA
D M3I41_04200 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D M3I41_04205 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D M3I41_04195 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D M3I41_01640 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D M3I41_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D M3I41_03150 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D M3I41_05250 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D M3I41_08495 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D M3I41_06570 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D M3I41_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D M3I41_05040 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D M3I41_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D M3I41_03755 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D M3I41_01310 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D M3I41_06145 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D M3I41_05465 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D M3I41_05165 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D M3I41_05175 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D M3I41_06535 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D M3I41_08915 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:agh03029]
D M3I41_05555 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D M3I41_06645 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D M3I41_05625 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D M3I41_07695 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D M3I41_07700 fusA; elongation factor G K02355 fusA; elongation factor G
D M3I41_05260 era; GTPase Era K03595 era; GTPase
D M3I41_06610 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M3I41_05805 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M3I41_04285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M3I41_05825 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D M3I41_02970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M3I41_06700 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D M3I41_06695 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D M3I41_06705 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D M3I41_08975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M3I41_00615 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M3I41_08750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M3I41_07390 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D M3I41_00625 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D M3I41_05290 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D M3I41_02730 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D M3I41_09095 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M3I41_08645 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:agh02000]
D M3I41_09050 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D M3I41_09040 ATP-binding cassette domain-containing protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D M3I41_07410 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D M3I41_07405 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D M3I41_03195 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D M3I41_03200 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D M3I41_08240 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D M3I41_00660 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D M3I41_00665 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D M3I41_03310 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D M3I41_03295 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D M3I41_03300 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D M3I41_03290 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D M3I41_08790 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D M3I41_03080 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D M3I41_03085 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D M3I41_00985 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D M3I41_00990 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D M3I41_00995 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D M3I41_03465 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D M3I41_08875 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D M3I41_08880 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D M3I41_08885 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D M3I41_05045 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D M3I41_05050 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D M3I41_08620 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D M3I41_02350 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D M3I41_02355 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D M3I41_02360 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D M3I41_06175 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D M3I41_08630 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D M3I41_06170 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D M3I41_08635 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D M3I41_06165 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D M3I41_01590 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D M3I41_01595 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D M3I41_01655 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D M3I41_01600 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D M3I41_01660 ABC transporter ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D M3I41_03640 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D M3I41_05835 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D M3I41_05845 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D M3I41_05840 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D M3I41_00850 anchored repeat-type ABC transporter permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein
D M3I41_00845 anchored repeat-type ABC transporter ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D M3I41_09065 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component
D M3I41_09055 energy-coupling factor ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D M3I41_06255 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D M3I41_06260 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D M3I41_01955 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D M3I41_05710 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D M3I41_06140 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D M3I41_08035 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D M3I41_07740 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D M3I41_06945 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D M3I41_06940 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D M3I41_07745 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D M3I41_07965 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D M3I41_06510 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D M3I41_04100 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D M3I41_08955 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D M3I41_00175 MFS transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D M3I41_01325 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D M3I41_03330 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D M3I41_07365 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D M3I41_03360 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D M3I41_03350 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D M3I41_03345 PTS glucose/sucrose transporter subunit IIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D M3I41_03355 PTS glucose/sucrose transporter subunit IIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D M3I41_04525 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D M3I41_03675 glucose PTS transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D M3I41_01090 ion transporter K10716 kch; voltage-gated potassium channel
D M3I41_08575 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D M3I41_02920 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D M3I41_02925 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D M3I41_02140 amino acid permease K11733 lysP; lysine-specific permease
D M3I41_08375 amino acid permease K11738 ansP; L-asparagine permease
D M3I41_05635 amino acid permease K16237 aroP; aromatic amino acid permease
D M3I41_07975 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D M3I41_03880 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D M3I41_01610 L-lactate permease K03303 lutP; lactate permease
D M3I41_01425 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D M3I41_01420 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D M3I41_05000 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D M3I41_05005 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D M3I41_00370 codB; cytosine permease K10974 codB; cytosine permease
D M3I41_08690 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D M3I41_05200 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D M3I41_02965 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D M3I41_00070 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D M3I41_00075 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D M3I41_00890 VIT1/CCC1 family protein K22736 VIT; vacuolar iron transporter family protein
D M3I41_02755 MarC family protein K05595 marC; multiple antibiotic resistance protein
D M3I41_03895 NAAT family transporter K05595 marC; multiple antibiotic resistance protein
D M3I41_01150 FTR1 family protein K07243 FTR; high-affinity iron transporter
D M3I41_01160 efeB; iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
C 02044 Secretion system [BR:agh02044]
D M3I41_00570 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D M3I41_05380 YggT family protein K02221 yggT; YggT family protein
D M3I41_06810 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M3I41_04215 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D M3I41_02260 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M3I41_04220 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D M3I41_04695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M3I41_07575 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M3I41_05735 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D M3I41_03550 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M3I41_09095 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M3I41_04470 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
C 02042 Bacterial toxins [BR:agh02042]
D M3I41_02920 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D M3I41_02925 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D M3I41_02165 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:agh02022]
D M3I41_06835 mtrA; MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D M3I41_08725 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D M3I41_08940 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D M3I41_05725 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D M3I41_03190 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D M3I41_03185 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D M3I41_06730 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D M3I41_03860 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:agh02035]
D M3I41_00570 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:agh04812]
D M3I41_05395 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D M3I41_04685 ParA family protein K03496 parA; chromosome partitioning protein
D M3I41_09075 AAA family ATPase K03496 parA; chromosome partitioning protein
D M3I41_09070 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:agh04147]
D M3I41_08645 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D M3I41_08120 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M3I41_04710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M3I41_04705 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D M3I41_03850 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M3I41_00060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D M3I41_08750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M3I41_00615 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M3I41_08780 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M3I41_07385 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D M3I41_07695 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D M3I41_03610 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D M3I41_05170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D M3I41_04100 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D M3I41_03510 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D M3I41_07570 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D M3I41_04225 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D M3I41_06915 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D M3I41_03125 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D M3I41_01620 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D M3I41_02135 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_04840 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_05075 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M3I41_00740 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D M3I41_03035 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D M3I41_04795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M3I41_06355 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D M3I41_04700 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M3I41_08835 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:agh02048]
D M3I41_03955 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D M3I41_06215 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D M3I41_08420 hsdR; type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D M3I41_06200 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D M3I41_08415 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D M3I41_01940 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D M3I41_03935 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D M3I41_03930 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D M3I41_01835 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D M3I41_01840 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D M3I41_05395 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D M3I41_06025 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:agh03100]
D M3I41_08550 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_00045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_03270 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_03275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M3I41_02950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_00340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_08665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_06285 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M3I41_06430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D M3I41_01275 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D M3I41_04130 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D M3I41_06020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D M3I41_08225 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D M3I41_01270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M3I41_06010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M3I41_06015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M3I41_00955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_04125 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_04740 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_03415 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M3I41_06290 tRNA-His K14226 tRNA-His; tRNA His
D M3I41_00040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D M3I41_00130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M3I41_04885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M3I41_06090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M3I41_06070 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M3I41_01365 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M3I41_06075 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M3I41_02220 tRNA-Met K14230 tRNA-Met; tRNA Met
D M3I41_03285 tRNA-Met K14230 tRNA-Met; tRNA Met
D M3I41_01280 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D M3I41_03420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M3I41_00530 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M3I41_04665 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M3I41_08845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M3I41_08380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M3I41_02215 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M3I41_02255 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D M3I41_04135 tRNA-Val K14237 tRNA-Val; tRNA Val
D M3I41_04735 tRNA-Val K14237 tRNA-Val; tRNA Val
D M3I41_04120 tRNA-Val K14237 tRNA-Val; tRNA Val
D M3I41_08350 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D M3I41_03580 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D M3I41_02155 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D M3I41_01290 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D M3I41_01005 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D M3I41_07930 FAD-dependent oxidoreductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D M3I41_01815 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D M3I41_04760 pflA; pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D M3I41_07920 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D M3I41_07895 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D M3I41_04510 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D M3I41_03240 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D M3I41_03845 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D M3I41_05065 hypothetical protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D M3I41_02750 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D M3I41_08300 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D M3I41_06985 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D M3I41_06445 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D M3I41_00430 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D M3I41_01490 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D M3I41_06855 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D M3I41_00365 AGE family epimerase/isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D M3I41_04075 cation-translocating P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D M3I41_07770 cadA; cadmium-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D M3I41_06500 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D M3I41_06360 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D M3I41_08925 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D M3I41_05310 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D M3I41_02465 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D M3I41_03430 tig; trigger factor K03545 tig; trigger factor
D M3I41_06245 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D M3I41_08930 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D M3I41_05655 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D M3I41_05660 YraN family protein K07460 yraN; putative endonuclease
D M3I41_03800 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease
D M3I41_05650 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D M3I41_04300 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D M3I41_03995 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D M3I41_08715 PspA/IM30 family protein K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D M3I41_04540 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D M3I41_03585 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D M3I41_06040 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D M3I41_06045 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D M3I41_09035 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D M3I41_06650 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D M3I41_00140 transporter K07085 K07085; putative transport protein
D M3I41_05340 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D M3I41_09090 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D M3I41_02380 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D M3I41_05275 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D M3I41_02205 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D M3I41_06520 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D M3I41_06515 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D M3I41_02410 VTT domain-containing protein K03975 dedA; membrane-associated protein
D M3I41_07900 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
C 99997 Function unknown
D M3I41_05700 RNA-binding protein K06960 K06960; uncharacterized protein
D M3I41_07345 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D M3I41_00525 metallophosphoesterase K07098 K07098; uncharacterized protein
D M3I41_01000 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D M3I41_09100 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D M3I41_08110 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D M3I41_06300 UPF0182 family protein K09118 K09118; uncharacterized protein
D M3I41_07760 PH domain-containing protein K09167 K09167; uncharacterized protein
D M3I41_04105 YciI family protein K09780 K09780; uncharacterized protein
D M3I41_00730 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
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#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 6, 2024