+D GENES KO
#
KEGG Orthology (KO) - Akkermansia glycaniphila
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:agl00010]
D PYTT_2114 rok family K25026 glk; glucokinase [EC:2.7.1.2]
D PYTT_1204 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0733 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PYTT_1820 aldolase-type tim barrel K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PYTT_0358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PYTT_0257 gapdh-i: glyceraldehyde-3-phosphate dehydrogenase type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PYTT_0258 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PYTT_1937 phosphoglycerate/bisphosphoglycerate mutase active site K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PYTT_1905 pgm bpd ind: phosphoglycerate mutase (2 3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PYTT_1409 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PYTT_1965 pyru phos dikin: pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_1344 pyruv ox red: pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PYTT_0162 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_0408 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PYTT_2049 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:agl00020]
D PYTT_0378 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PYTT_1197 aconitase 1: aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PYTT_2541 prok nadp idh: isocitrate dehydrogenase nadp-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0797 succoaalpha: succinate-coa ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PYTT_0798 succoabeta: succinate-coa ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PYTT_0859 sdha bsu: succinate dehydrogenase or fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PYTT_0860 alpha-helical ferredoxin K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PYTT_0858 succinate dehydrogenase/fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PYTT_0279 fumarate hydratase (fumerase) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PYTT_2049 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PYTT_1344 pyruv ox red: pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:agl00030]
D PYTT_1204 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PYTT_0717 aldolase-type tim barrel K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PYTT_1310 tktlase bact: transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PYTT_1665 talab: transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_0672 ribp ppkin: ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PYTT_1122 aldolase-type tim barrel K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PYTT_1125 carbohydrate kinase pfkb K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PYTT_1820 aldolase-type tim barrel K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0733 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:agl00040]
D PYTT_1123 metal-dependent hydrolase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PYTT_1124 uxua: mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D PYTT_1596 ndp-sugdhase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PYTT_0145 utp--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PYTT_0717 aldolase-type tim barrel K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PYTT_0195 groes-like K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PYTT_0473 fuci: l-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D PYTT_0474 fuculo kin coli: l-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D PYTT_0475 class ii aldolase/adducin n-terminal K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:agl00051]
D PYTT_0484 carbohydrate kinase pfkb K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PYTT_0383 phosphomannose isomerase type i K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PYTT_0806 nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PYTT_0777 nucleotide-diphospho-sugar transferases K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PYTT_0802 gmd: gdp-mannose 4 6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PYTT_0803 nad dependent epimerase/dehydratase family K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PYTT_0473 fuci: l-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D PYTT_0474 fuculo kin coli: l-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D PYTT_0475 class ii aldolase/adducin n-terminal K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0733 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PYTT_0195 groes-like K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PYTT_1820 aldolase-type tim barrel K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PYTT_0358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:agl00052]
D PYTT_0162 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PYTT_1419 gal kin: galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PYTT_2494 nad dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PYTT_1666 nad(p)-binding domain K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PYTT_0145 utp--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_2114 rok family K25026 glk; glucokinase [EC:2.7.1.2]
D PYTT_0192 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1581 glycoside hydrolase superfamily K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0736 beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_2284 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0507 invasin/intimin cell-adhesion fragments K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1481 beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1906 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1907 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_2260 glycoside hydrolase catalytic domain K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PYTT_1080 udp-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PYTT_2502 aldolase-type tim barrel K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PYTT_2535 melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0733 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PYTT_2292 aldolase-type tim barrel K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PYTT_2339 glycosyl hydrolases family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D PYTT_1596 ndp-sugdhase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:agl00500]
D PYTT_2292 aldolase-type tim barrel K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PYTT_2339 glycosyl hydrolases family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PYTT_0145 utp--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PYTT_2056 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PYTT_1900 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PYTT_0997 glycosyl transferases group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D PYTT_2283 immunoglobulin e-set K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PYTT_1886 more p ylases: alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PYTT_0998 glycoside hydrolase/deacetylase beta/alpha-barrel K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D PYTT_0433 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_2114 rok family K25026 glk; glucokinase [EC:2.7.1.2]
D PYTT_1204 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PYTT_0484 carbohydrate kinase pfkb K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:agl00520]
D PYTT_2532 glycoside hydrolase superfamily K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PYTT_0795 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2248 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0523 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1433 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0004 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0908 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0909 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1475 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0035 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2455 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1090 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1174 naga: n-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PYTT_2274 nagb: glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PYTT_0484 carbohydrate kinase pfkb K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PYTT_1879 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PYTT_2499 rna 3'-terminal phosphate cyclase/enolpyruvate transferase alpha/beta K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PYTT_0731 six-hairpin glycosidase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D PYTT_0730 aldolase-type tim barrel K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D PYTT_2114 rok family K25026 glk; glucokinase [EC:2.7.1.2]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_0145 utp--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PYTT_1596 ndp-sugdhase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PYTT_1419 gal kin: galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PYTT_2494 nad dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PYTT_1666 nad(p)-binding domain K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PYTT_1080 udp-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PYTT_1204 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PYTT_0383 phosphomannose isomerase type i K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PYTT_0777 nucleotide-diphospho-sugar transferases K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PYTT_0806 nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PYTT_0802 gmd: gdp-mannose 4 6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PYTT_0803 nad dependent epimerase/dehydratase family K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:agl00620]
D PYTT_1344 pyruv ox red: pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_1198 phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PYTT_2544 thiamin diphosphate-binding fold K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PYTT_2533 glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PYTT_1578 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PYTT_2101 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PYTT_1498 nad(p)-binding domain K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PYTT_0610 na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PYTT_0279 fumarate hydratase (fumerase) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PYTT_2049 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PYTT_1965 pyru phos dikin: pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PYTT_0689 citramal synth: citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PYTT_2364 leua bact: 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:agl00630]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PYTT_0378 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PYTT_1197 aconitase 1: aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PYTT_0606 glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PYTT_1455 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_1456 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_0364 fad-binding type 2 K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D PYTT_2337 catalase K03781 katE; catalase [EC:1.11.1.6]
D PYTT_1143 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PYTT_1654 dihydroneopterin aldolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PYTT_1510 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PYTT_0047 glutamine synthetase glycine-rich site K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PYTT_0015 pyridoxal phosphate-dependent transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PYTT_0101 gcvp: glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PYTT_0103 gcvt: glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0102 gcvh: glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
D PYTT_1122 aldolase-type tim barrel K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:agl00640]
D PYTT_1198 phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0606 glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PYTT_1455 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_1456 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_0798 succoabeta: succinate-coa ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PYTT_0797 succoaalpha: succinate-coa ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:agl00650]
D PYTT_0610 na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PYTT_0609 single hybrid motif K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PYTT_0859 sdha bsu: succinate dehydrogenase or fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PYTT_0860 alpha-helical ferredoxin K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PYTT_0858 succinate dehydrogenase/fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PYTT_2046 pyridoxal phosphate-dependent transferase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PYTT_1344 pyruv ox red: pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PYTT_0619 acolac lg: acetolactate synthase large subunit biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PYTT_1547 acolac sm: acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:agl00660]
D PYTT_0619 acolac lg: acetolactate synthase large subunit biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PYTT_1547 acolac sm: acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PYTT_0798 succoabeta: succinate-coa ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PYTT_0797 succoaalpha: succinate-coa ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PYTT_1825 leuc: 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PYTT_1824 aconitase/3-isopropylmalate dehydratase swivel K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PYTT_1326 isocitrate/isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:agl00562]
D PYTT_2472 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PYTT_0358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:agl00190]
D PYTT_0602 nadh-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PYTT_1258 nuob fam: nadh-quinone oxidoreductase b subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PYTT_1259 respiratory-chain nadh dehydrogenase 30 kd subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PYTT_0648 nuod: nadh dehydrogenase (quinone) d subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PYTT_0649 thioredoxin-like fold K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PYTT_0650 respiratory-chain nadh dehydrogenase 51 kd subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PYTT_0651 molybdopterin oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PYTT_0652 nadh dehydrogenase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PYTT_0653 4fe-4s dicluster domain K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PYTT_0654 nadh-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PYTT_0655 nadh-ubiquinone/plastoquinone oxidoreductase chain 4l K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PYTT_0656 proton-conducting membrane transporter K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PYTT_0658 proton-conducting membrane transporter K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PYTT_0859 sdha bsu: succinate dehydrogenase or fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PYTT_0860 alpha-helical ferredoxin K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PYTT_0858 succinate dehydrogenase/fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PYTT_0251 cytochrome bd terminal oxidase subunit i K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PYTT_0252 cytochrome bd terminal oxidase subunit ii K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PYTT_1337 atpa: atp synthase f1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PYTT_1335 atpd: atp synthase f1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PYTT_1336 atp synthase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PYTT_1338 atp synthase delta (oscp) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PYTT_1334 atp synt epsi: atp synthase f1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PYTT_1341 atp synt 6 or a: atp synthase f0 a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PYTT_1339 atp synthase b/b' cf(0) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PYTT_1340 atpase f0 complex subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PYTT_0374 drtgg K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PYTT_1549 poly p kin: polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:agl00710]
D PYTT_0258 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PYTT_0257 gapdh-i: glyceraldehyde-3-phosphate dehydrogenase type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PYTT_1820 aldolase-type tim barrel K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PYTT_1310 tktlase bact: transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PYTT_0358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PYTT_0717 aldolase-type tim barrel K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PYTT_1665 talab: transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PYTT_1965 pyru phos dikin: pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PYTT_1498 nad(p)-binding domain K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes [PATH:agl00720]
D PYTT_1344 pyruv ox red: pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PYTT_1965 pyru phos dikin: pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PYTT_0279 fumarate hydratase (fumerase) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PYTT_0859 sdha bsu: succinate dehydrogenase or fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PYTT_0860 alpha-helical ferredoxin K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PYTT_0858 succinate dehydrogenase/fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PYTT_0797 succoaalpha: succinate-coa ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PYTT_0798 succoabeta: succinate-coa ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PYTT_2541 prok nadp idh: isocitrate dehydrogenase nadp-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PYTT_1197 aconitase 1: aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PYTT_0606 glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PYTT_1455 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_1456 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_0589 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PYTT_0792 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PYTT_2583 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PYTT_1198 phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00680 Methane metabolism [PATH:agl00680]
D PYTT_0015 pyridoxal phosphate-dependent transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PYTT_1409 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PYTT_1820 aldolase-type tim barrel K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0733 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PYTT_1198 phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PYTT_1937 phosphoglycerate/bisphosphoglycerate mutase active site K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PYTT_1905 pgm bpd ind: phosphoglycerate mutase (2 3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PYTT_1873 d-isomer specific 2-hydroxyacid dehydrogenases signature 2. K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:agl00910]
D PYTT_1492 hybrid clust: hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PYTT_2340 glutamate/leucine/phenylalanine/valine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PYTT_0047 glutamine synthetase glycine-rich site K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PYTT_0048 glutamine amidotransferases class-ii K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:agl00920]
D PYTT_1618 nmt1-like family K15553 ssuA; sulfonate transport system substrate-binding protein
D PYTT_1620 binding-protein-dependent transport system inner membrane component K15554 ssuC; sulfonate transport system permease protein
D PYTT_1619 abc transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PYTT_2334 cysn: sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PYTT_2335 cysd: sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PYTT_1073 dhh family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PYTT_2336 cysh: phosophoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PYTT_0685 flavoprotein pyridine nucleotide cytochrome reductase signature K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PYTT_2259 nitrite and sulphite reductase 4fe-4s domain K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PYTT_1488 nitrite and sulphite reductase 4fe-4s domain K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PYTT_1151 cyse: serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PYTT_1404 cyskm: cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PYTT_0919 alpha/beta hydrolase fold K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:agl00061]
D PYTT_0625 acyl carrier: acyl carrier protein K02078 acpP; acyl carrier protein
D PYTT_1892 fabd: malonyl coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PYTT_0684 fabh: 3-oxoacyl-[acyl-carrier-protein] synthase iii K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PYTT_1586 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PYTT_1681 3oxo acp reduc: 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PYTT_2075 lpxc: udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PYTT_0007 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PYTT_1108 polyketide synthase enoylreductase domain K07512 MECR; mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase [EC:1.3.1.- 1.3.1.38]
C 00062 Fatty acid elongation [PATH:agl00062]
D PYTT_1108 polyketide synthase enoylreductase domain K07512 MECR; mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase [EC:1.3.1.- 1.3.1.38]
C 00071 Fatty acid degradation
D PYTT_0940 amp-binding enzyme K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PYTT_0613 acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:agl00100]
D PYTT_1876 squalene/phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:agl00561]
D PYTT_1846 fatty acid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PYTT_0147 tigr00023: acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PYTT_2344 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PYTT_0628 monogalactosyldiacylglycerol (mgdg) synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PYTT_2502 aldolase-type tim barrel K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PYTT_2535 melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:agl00564]
D PYTT_0146 nad-dependent glycerol-3-phosphate dehydrogenase n-terminus K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PYTT_0147 tigr00023: acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PYTT_2344 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PYTT_0940 amp-binding enzyme K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PYTT_0613 acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PYTT_0278 cytidylyltransferase family K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PYTT_0281 cytidylyltransferase family K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PYTT_0968 pssa: cdp-diacylglycerol-serine o-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PYTT_1925 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PYTT_2286 pgsa: cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PYTT_0659 bac cardiolipin: cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:agl00600]
D PYTT_0192 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1581 glycoside hydrolase superfamily K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0736 beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_2284 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0507 invasin/intimin cell-adhesion fragments K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1481 beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1906 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1907 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0238 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0254 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0662 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0365 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_1909 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_2502 aldolase-type tim barrel K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PYTT_2535 melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PYTT_0795 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2248 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0523 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1433 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0004 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0908 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0909 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1475 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0035 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2455 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1090 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D PYTT_1784 hotdog domain K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:agl00230]
D PYTT_2029 nudix domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_0672 ribp ppkin: ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PYTT_0530 glutamine amidotransferases class-ii K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PYTT_0749 purd: phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PYTT_0800 purn: phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PYTT_1103 class i glutamine amidotransferase-like K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PYTT_1102 fgam synth ii: phosphoribosylformylglycinamidine synthase ii K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D PYTT_0529 purm: phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PYTT_0442 air carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PYTT_1100 purc: phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PYTT_1660 purb: adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PYTT_0337 purh: phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PYTT_0189 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PYTT_1663 phosphoribosyltransferase-like K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PYTT_1507 aldolase-type tim barrel K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PYTT_1470 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PYTT_1322 inosine triphosphate pyrophosphatase-like K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PYTT_1508 glutamine amidotransferase class-i K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PYTT_1795 guanylate kinase/l-type calcium channel beta subunit K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PYTT_2117 nrdj z: ribonucleoside-diphosphate reductase adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PYTT_1442 nrdd: anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PYTT_1550 ppx/gppa phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PYTT_1798 pura: adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PYTT_1189 tigr00282: metallophosphoesterase mg 246/bb 0505 family K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PYTT_0923 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PYTT_0370 ntp pyrophosphohydrolase mazg putative catalytic core K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PYTT_2334 cysn: sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PYTT_2335 cysd: sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:agl00240]
D PYTT_1806 cpsaseii lrg: carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PYTT_1500 cpsaseii lrg: carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PYTT_1799 cpsaseiismall: carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PYTT_0444 asp carb tr: aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PYTT_0747 metal-dependent hydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PYTT_0445 metal-dependent hydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PYTT_1860 aldolase-type tim barrel K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PYTT_2534 pyre: orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PYTT_1725 aldolase-type tim barrel K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PYTT_0701 aspartate/glutamate/uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PYTT_1470 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PYTT_0370 ntp pyrophosphohydrolase mazg putative catalytic core K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PYTT_1998 inosine triphosphate pyrophosphatase-like K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PYTT_0313 pyrg: ctp synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PYTT_2345 cmk: cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PYTT_0443 phosphoribosyltransferase-like K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PYTT_1189 tigr00282: metallophosphoesterase mg 246/bb 0505 family K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PYTT_1442 nrdd: anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PYTT_2117 nrdj z: ribonucleoside-diphosphate reductase adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PYTT_2247 cytidine deaminase-like K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PYTT_2579 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PYTT_1724 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:agl00250]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_1652 nadb: l-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PYTT_0429 argg: argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PYTT_2258 argh: argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PYTT_1798 pura: adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PYTT_1660 purb: adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PYTT_0444 asp carb tr: aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PYTT_2046 pyridoxal phosphate-dependent transferase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PYTT_0048 glutamine amidotransferases class-ii K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PYTT_2340 glutamate/leucine/phenylalanine/valine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PYTT_2257 aldehyde/histidinol dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PYTT_0047 glutamine synthetase glycine-rich site K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PYTT_1806 cpsaseii lrg: carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PYTT_1500 cpsaseii lrg: carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PYTT_1799 cpsaseiismall: carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PYTT_2324 gln ase: glutaminase a K01425 glsA; glutaminase [EC:3.5.1.2]
D PYTT_1103 class i glutamine amidotransferase-like K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PYTT_0530 glutamine amidotransferases class-ii K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:agl00260]
D PYTT_0085 asp kinases: aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PYTT_0030 asd b: aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PYTT_0084 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PYTT_0015 pyridoxal phosphate-dependent transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PYTT_1937 phosphoglycerate/bisphosphoglycerate mutase active site K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PYTT_1905 pgm bpd ind: phosphoglycerate mutase (2 3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PYTT_1873 d-isomer specific 2-hydroxyacid dehydrogenases signature 2. K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PYTT_0985 2am3keto coa: glycine c-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PYTT_1970 tdh: l-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PYTT_0101 gcvp: glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PYTT_0103 gcvt: glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0102 gcvh: glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
D PYTT_0968 pssa: cdp-diacylglycerol-serine o-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PYTT_1867 sda mono: l-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PYTT_1997 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PYTT_1629 ribulose-phosphate binding barrel K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PYTT_1628 trpb: tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PYTT_2264 trpb: tryptophan synthase beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:agl00270]
D PYTT_1151 cyse: serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PYTT_1404 cyskm: cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PYTT_0349 pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PYTT_1483 pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PYTT_1922 meth: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PYTT_1051 metk: methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PYTT_0189 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PYTT_0518 metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PYTT_1052 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PYTT_0085 asp kinases: aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PYTT_0030 asd b: aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PYTT_0084 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PYTT_0919 alpha/beta hydrolase fold K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PYTT_1277 pyridoxal phosphate-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PYTT_1403 pyridoxal phosphate-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PYTT_2027 aminotransferase class iv K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_0984 malatedh-sf1: malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PYTT_1867 sda mono: l-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PYTT_1873 d-isomer specific 2-hydroxyacid dehydrogenases signature 2. K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:agl00280]
D PYTT_2027 aminotransferase class iv K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0606 glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PYTT_1455 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_1456 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:agl00290]
D PYTT_1997 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PYTT_1825 leuc: 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PYTT_1824 aconitase/3-isopropylmalate dehydratase swivel K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PYTT_1326 isocitrate/isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PYTT_0619 acolac lg: acetolactate synthase large subunit biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PYTT_1547 acolac sm: acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PYTT_1540 ilvc: ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PYTT_2448 ilvd: dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PYTT_2027 aminotransferase class iv K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PYTT_1793 pyridoxal phosphate-dependent transferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PYTT_0689 citramal synth: citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PYTT_2364 leua bact: 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:agl00300]
D PYTT_0084 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PYTT_0085 asp kinases: aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PYTT_0030 asd b: aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PYTT_0125 aldolase-type tim barrel K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PYTT_0126 dapb: 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PYTT_1734 pyridoxal phosphate-dependent transferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PYTT_0180 dapf: diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PYTT_2330 dapat plant: ll-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PYTT_1821 lysa: diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PYTT_1914 dap-dh: diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D PYTT_0951 mure: udp-n-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PYTT_0950 murf: udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:agl00310]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0636 aldolase-type tim barrel K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:agl00220]
D PYTT_0712 aspartate/ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PYTT_0429 argg: argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PYTT_2258 argh: argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PYTT_2324 gln ase: glutaminase a K01425 glsA; glutaminase [EC:3.5.1.2]
D PYTT_1103 class i glutamine amidotransferase-like K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PYTT_0047 glutamine synthetase glycine-rich site K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PYTT_1806 cpsaseii lrg: carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PYTT_1500 cpsaseii lrg: carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PYTT_1799 cpsaseiismall: carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PYTT_2340 glutamate/leucine/phenylalanine/valine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_0296 aspartate/glutamate/uridylate kinase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PYTT_2460 argj: glutamate n-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PYTT_0936 aspartate/glutamate/uridylate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PYTT_0415 argc: n-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PYTT_1734 pyridoxal phosphate-dependent transferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:agl00330]
D PYTT_0595 spea: arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PYTT_1148 porphyromonas-type peptidyl-arginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PYTT_0787 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PYTT_0596 nspc: carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D PYTT_2492 proc: pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PYTT_2257 aldehyde/histidinol dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PYTT_0481 aspartate/glutamate/uridylate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PYTT_0482 aldehyde/histidinol dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:agl00340]
D PYTT_0785 hisg: atp phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PYTT_0020 phosphoribosyl-amp cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PYTT_1678 hisa euk: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PYTT_0262 imp synth hish: imidazole glycerol phosphate synthase glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PYTT_1482 ribulose-phosphate binding barrel K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PYTT_0261 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PYTT_1898 hisc: histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PYTT_2132 histidinol phosphate phosphatase hisj K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D PYTT_1274 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:agl00350]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_1898 hisc: histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:agl00360]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_1898 hisc: histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:agl00380]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_2337 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:agl00400]
D PYTT_0506 aldolase-type tim barrel K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PYTT_1281 arob: 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PYTT_0155 aldolase-type tim barrel K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D PYTT_0181 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PYTT_0527 epsp synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PYTT_1811 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PYTT_1624 adc synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PYTT_1625 trpd: anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D PYTT_1627 aldolase-type tim barrel K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PYTT_1626 aldolase-type tim barrel K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PYTT_1629 ribulose-phosphate binding barrel K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PYTT_1628 trpb: tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PYTT_2264 trpb: tryptophan synthase beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PYTT_0315 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PYTT_1757 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_1898 hisc: histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:agl00410]
D PYTT_1407 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PYTT_2046 pyridoxal phosphate-dependent transferase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PYTT_1246 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:agl00430]
D PYTT_2046 pyridoxal phosphate-dependent transferase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PYTT_1198 phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00440 Phosphonate and phosphinate metabolism [PATH:agl00440]
D PYTT_0871 phosphonatase: phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PYTT_0872 pyridoxal phosphate-dependent transferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PYTT_1076 metallo-beta-lactamase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:agl00450]
D PYTT_0349 pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PYTT_1483 pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PYTT_1922 meth: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PYTT_2539 pyridoxal phosphate-dependent transferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PYTT_1868 trx reduct: thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PYTT_2334 cysn: sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PYTT_2335 cysd: sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PYTT_2020 metg: methionine--trna ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:agl00460]
D PYTT_2056 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PYTT_1900 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PYTT_0015 pyridoxal phosphate-dependent transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:agl00470]
D PYTT_2119 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PYTT_2282 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PYTT_0942 d ala d alatigr: d-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PYTT_2324 gln ase: glutaminase a K01425 glsA; glutaminase [EC:3.5.1.2]
D PYTT_1103 class i glutamine amidotransferase-like K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PYTT_0948 murd: udp-n-acetylmuramoylalanine--d-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PYTT_0180 dapf: diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PYTT_1821 lysa: diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism
D PYTT_2541 prok nadp idh: isocitrate dehydrogenase nadp-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:agl00511]
D PYTT_0238 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0254 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0662 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0365 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_1909 sialidases K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PYTT_0192 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1581 glycoside hydrolase superfamily K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0736 beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_2284 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0507 invasin/intimin cell-adhesion fragments K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1481 beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1906 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_1907 glycoside hydrolase catalytic domain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PYTT_0795 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2248 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0523 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1433 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0004 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0908 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0909 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1475 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0035 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2455 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1090 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0226 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1171 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0334 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1227 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0866 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0098 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1994 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0217 six-hairpin glycosidase-like K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D PYTT_1956 six-hairpin glycosidase-like K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D PYTT_2486 six-hairpin glycosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D PYTT_1673 six-hairpin glycosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:agl00540]
D PYTT_1142 lipid a lpxa: acyl-[acyl-carrier-protein]-udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PYTT_2075 lpxc: udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PYTT_1248 lipid a lpxd: udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase lpxd K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PYTT_0825 protein of unknown function (duf1009) K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PYTT_0275 lpxb: lipid-a-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PYTT_1912 tetraacyldisaccharide-1-p 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PYTT_0269 sugar isomerase (sis) K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PYTT_1009 aldolase-type tim barrel K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PYTT_0312 nucleotide-diphospho-sugar transferases K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PYTT_0156 3-deoxy-d-manno-octulosonic-acid transferase (kdotransferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PYTT_0207 bacterial lipid a biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PYTT_1082 uncharacterized protein conserved in bacteria (duf2219) K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:agl00541]
D PYTT_0145 utp--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PYTT_2494 nad dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PYTT_1666 nad(p)-binding domain K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PYTT_1080 udp-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PYTT_1596 ndp-sugdhase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PYTT_2545 dtdp gluc dehyt: dtdp-glucose 4 6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0154 gdp-mannose 4 6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0029 nad(p)-binding domain K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PYTT_0383 phosphomannose isomerase type i K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PYTT_0806 nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PYTT_0802 gmd: gdp-mannose 4 6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PYTT_0803 nad dependent epimerase/dehydratase family K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00550 Peptidoglycan biosynthesis [PATH:agl00550]
D PYTT_2499 rna 3'-terminal phosphate cyclase/enolpyruvate transferase alpha/beta K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PYTT_0944 murc: udp-n-acetylmuramate--l-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PYTT_0948 murd: udp-n-acetylmuramoylalanine--d-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PYTT_0951 mure: udp-n-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PYTT_0942 d ala d alatigr: d-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PYTT_0950 murf: udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PYTT_0805 upps: di-trans poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PYTT_1986 bacitracin resistance protein baca K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PYTT_0949 mray: phospho-n-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PYTT_0945 murg: undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PYTT_0375 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2146 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2446 transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PYTT_2471 transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PYTT_2331 beta-lactamase/transpeptidase-like K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PYTT_0952 beta-lactamase/transpeptidase-like K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D PYTT_2501 d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PYTT_0732 d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:agl00552]
D PYTT_1986 bacitracin resistance protein baca K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PYTT_1548 glycosyl transferase wecb/taga/cpsf K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PYTT_0628 monogalactosyldiacylglycerol (mgdg) synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:agl00543]
D PYTT_1658 polysaccharide pyruvyl transferase K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
D PYTT_0710 mboat membrane-bound o-acyltransferase family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D PYTT_0868 mboat membrane-bound o-acyltransferase family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D PYTT_1151 cyse: serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PYTT_1506 acyltransferase family K13663 gumF; acyltransferase [EC:2.3.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:agl00730]
D PYTT_1864 thic: phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PYTT_2348 hmp-p kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PYTT_0330 pyridoxal phosphate-dependent transferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PYTT_1321 aldolase-type tim barrel K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PYTT_0419 dxs: 1-deoxy-d-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PYTT_0737 aldolase-type tim barrel K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PYTT_0201 aldolase-type tim barrel K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PYTT_2591 thil: thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PYTT_0405 tigr00157: ribosome small subunit-dependent gtpase a K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PYTT_1086 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PYTT_0923 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:agl00740]
D PYTT_0249 ribb: 3 4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PYTT_1212 eubact ribd: riboflavin biosynthesis protein ribd K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PYTT_0380 6 7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PYTT_0470 ribe: riboflavin synthase alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PYTT_1071 ribf: riboflavin biosynthesis protein ribf K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PYTT_2029 nudix domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:agl00750]
D PYTT_1047 pdxh: pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PYTT_0237 pdxa: 4-hydroxythreonine-4-phosphate dehydrogenase pdxa K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PYTT_0336 aldolase-type tim barrel K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:agl00760]
D PYTT_1652 nadb: l-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PYTT_2480 nada: quinolinate synthetase complex a subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PYTT_0032 nadc: nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PYTT_0046 tigr00482: nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PYTT_0370 ntp pyrophosphohydrolase mazg putative catalytic core K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PYTT_2139 nade: nad+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PYTT_2474 competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PYTT_0932 atp-nad kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:agl00770]
D PYTT_0619 acolac lg: acetolactate synthase large subunit biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PYTT_1547 acolac sm: acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PYTT_1540 ilvc: ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PYTT_2448 ilvd: dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PYTT_0128 pyruvate/phosphoenolpyruvate kinase-like domain K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PYTT_0149 apba pane: 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PYTT_1246 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PYTT_0627 baf: pantothenate kinase type iii K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PYTT_0403 coabc dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D PYTT_0370 ntp pyrophosphohydrolase mazg putative catalytic core K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PYTT_2160 coad prev kdtb: pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PYTT_0335 4'-phosphopantetheinyl transferase superfamily K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PYTT_2027 aminotransferase class iv K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PYTT_1407 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:agl00780]
D PYTT_2307 bioc: malonyl-acyl carrier protein o-methyltransferase bioc K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PYTT_1586 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PYTT_1681 3oxo acp reduc: 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PYTT_0007 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PYTT_2308 alpha/beta hydrolase fold K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PYTT_2309 pyridoxal phosphate-dependent transferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PYTT_1464 pyridoxal phosphate-dependent transferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PYTT_1817 biod: dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PYTT_0821 aldolase-type tim barrel K01012 bioB; biotin synthase [EC:2.8.1.6]
D PYTT_0611 bira ligase: biotin--[acetyl-coa-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:agl00785]
D PYTT_1092 lipb: lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PYTT_1982 biotin/lipoate a/b protein ligase family K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PYTT_0391 lipa: lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0101 gcvp: glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PYTT_0103 gcvt: glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PYTT_0102 gcvh: glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:agl00790]
D PYTT_1592 type i gtp cyclohydrolase fole2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PYTT_1086 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PYTT_0127 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase hppk K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PYTT_0367 dhps: dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PYTT_1723 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PYTT_1053 folc: bifunctional protein folc K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PYTT_0249 ribb: 3 4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PYTT_0328 adc synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PYTT_0327 aminotransferase class iv K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PYTT_2310 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PYTT_0720 aldolase-type tim barrel K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PYTT_2143 rossmann-like alpha/beta/alpha sandwich fold K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PYTT_2144 quef-ii: 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PYTT_2521 metallo-beta-lactamase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:agl00670]
D PYTT_1723 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PYTT_0589 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PYTT_0792 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PYTT_0015 pyridoxal phosphate-dependent transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PYTT_0800 purn: phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PYTT_0337 purh: phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PYTT_1675 fmt: methionyl-trna formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PYTT_0103 gcvt: glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PYTT_1922 meth: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PYTT_1724 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PYTT_2583 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PYTT_0190 mthfs bact: 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:agl00860]
D PYTT_1591 hema: glutamyl-trna reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PYTT_0641 pyridoxal phosphate-dependent transferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PYTT_2024 aldolase-type tim barrel K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PYTT_1590 hemc: hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PYTT_1222 tetrapyrrole methylase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D PYTT_1940 aldolase-type tim barrel K22226 ahbC; Fe-coproporphyrin III synthase
D PYTT_1939 aldolase-type tim barrel K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PYTT_2522 cobalt chelatase (cbik) K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PYTT_2519 tetrapyrrole methylase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PYTT_2514 tetrapyrrole methylase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D PYTT_2516 cbid K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PYTT_2515 tetrapyrrole methylase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PYTT_2517 cobalamin (vitamin b12) biosynthesis cobh/cbic precorrin-8x methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PYTT_2513 cobb: cobyrinic acid a c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PYTT_0719 pduo nterm: atp:cob(i)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PYTT_2547 atp:corrinoid adenosyltransferase btur/cobo/cobp K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PYTT_2512 cobq: cobyric acid synthase cobq K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PYTT_2511 cobd/cbib protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PYTT_2354 cobinamide kinase / cobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PYTT_2352 cobs: cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PYTT_2353 xylose isomerase-like tim barrel K25496 cbiR; adenosylcobalamin phosphodiesterase
D PYTT_2351 phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:agl00130]
D PYTT_2552 4-hydroxybenzoyl-coa thioesterase active site K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PYTT_0562 meng menh ubie: ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PYTT_1926 mend: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PYTT_0708 alpha/beta hydrolase fold K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D PYTT_1826 enolase c-terminal domain-like K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PYTT_1262 amp-binding enzyme K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PYTT_0204 menb: naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PYTT_0395 mena: 1 4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:agl00900]
D PYTT_0419 dxs: 1-deoxy-d-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PYTT_0570 dxr: 1-deoxy-d-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PYTT_0644 nucleotide-diphospho-sugar transferases K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PYTT_1264 ispe: 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PYTT_2473 2-c-methyl-d-erythritol 2 4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PYTT_1759 ispg gcpe: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PYTT_1505 isph lytb: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PYTT_0031 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PYTT_1150 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PYTT_0805 upps: di-trans poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:agl00909]
D PYTT_1876 squalene/phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:agl00906]
D PYTT_2048 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PYTT_1310 tktlase bact: transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:agl00523]
D PYTT_2545 dtdp gluc dehyt: dtdp-glucose 4 6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0154 gdp-mannose 4 6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0029 nad(p)-binding domain K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D PYTT_2545 dtdp gluc dehyt: dtdp-glucose 4 6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0154 gdp-mannose 4 6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:agl00946]
D PYTT_2056 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PYTT_1900 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PYTT_1668 beta-lactamase class a signature K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:agl00332]
D PYTT_0481 aspartate/glutamate/uridylate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PYTT_0482 aldehyde/histidinol dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:agl00261]
D PYTT_2334 cysn: sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PYTT_2335 cysd: sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PYTT_0085 asp kinases: aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PYTT_0030 asd b: aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PYTT_0125 aldolase-type tim barrel K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PYTT_0126 dapb: 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:agl00521]
D PYTT_2114 rok family K25026 glk; glucokinase [EC:2.7.1.2]
D PYTT_1408 alpha-d-phosphohexomutase alpha/beta/alpha i/ii/iii K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PYTT_2472 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PYTT_2545 dtdp gluc dehyt: dtdp-glucose 4 6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0154 gdp-mannose 4 6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0029 nad(p)-binding domain K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PYTT_2114 rok family K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D PYTT_2545 dtdp gluc dehyt: dtdp-glucose 4 6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PYTT_0154 gdp-mannose 4 6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:agl00401]
D PYTT_1757 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_1898 hisc: histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PYTT_1624 adc synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PYTT_1892 fabd: malonyl coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PYTT_1681 3oxo acp reduc: 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PYTT_0007 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PYTT_0625 acyl carrier: acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:agl00999]
D PYTT_1051 metk: methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PYTT_2056 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PYTT_1900 glycoside hydrolase superfamily K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:agl00362]
D PYTT_2552 4-hydroxybenzoyl-coa thioesterase active site K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PYTT_0610 na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PYTT_0609 single hybrid motif K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D PYTT_0844 nickel-dependent hydrogenase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PYTT_0843 hyda: hydrogenase (nife) small subunit (hyda) K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:agl03020]
D PYTT_0455 rpob: dna-directed rna polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PYTT_0454 rpoc tigr: dna-directed rna polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PYTT_0424 rna polymerase alpha dna-directed subunit chain nucleotidyltransferase transferase transcription transcriptase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PYTT_1468 rna polymerase subunit omega/k/rpb6 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:agl03010]
D PYTT_2111 rpsa: ribosomal protein bs1 K02945 RP-S1; small subunit ribosomal protein S1
D PYTT_1529 rpsb bact: ribosomal protein us2 K02967 RP-S2; small subunit ribosomal protein S2
D PYTT_0888 rpsc bact: ribosomal protein us3 K02982 RP-S3; small subunit ribosomal protein S3
D PYTT_2096 rpsd bact: ribosomal protein us4 K02986 RP-S4; small subunit ribosomal protein S4
D PYTT_0926 rpse bact: ribosomal protein us5 K02988 RP-S5; small subunit ribosomal protein S5
D PYTT_0642 ribosomal protein s6 K02990 RP-S6; small subunit ribosomal protein S6
D PYTT_0898 rpsg bact: ribosomal protein us7 K02992 RP-S7; small subunit ribosomal protein S7
D PYTT_0929 ribosomal protein s8 K02994 RP-S8; small subunit ribosomal protein S8
D PYTT_0674 ribosomal protein s9/s16 K02996 RP-S9; small subunit ribosomal protein S9
D PYTT_0896 rpsj bact: ribosomal protein us10 K02946 RP-S10; small subunit ribosomal protein S10
D PYTT_2097 ribosomal protein s11 K02948 RP-S11; small subunit ribosomal protein S11
D PYTT_0899 nucleic acid-binding ob-fold K02950 RP-S12; small subunit ribosomal protein S12
D PYTT_2098 us13 bact: ribosomal protein us13 K02952 RP-S13; small subunit ribosomal protein S13
D PYTT_1719 ribosomal protein s14p/s29e K02954 RP-S14; small subunit ribosomal protein S14
D PYTT_0793 ribosomal protein s15 K02956 RP-S15; small subunit ribosomal protein S15
D PYTT_0769 s16: ribosomal protein bs16 K02959 RP-S16; small subunit ribosomal protein S16
D PYTT_0885 ribosomal protein s17/s11 K02961 RP-S17; small subunit ribosomal protein S17
D PYTT_1593 ribosomal protein s18 K02963 RP-S18; small subunit ribosomal protein S18
D PYTT_0891 rpss bact: ribosomal protein us19 K02965 RP-S19; small subunit ribosomal protein S19
D PYTT_1761 ribosomal protein s20 K02968 RP-S20; small subunit ribosomal protein S20
D PYTT_0640 s21p: ribosomal protein bs21 K02970 RP-S21; small subunit ribosomal protein S21
D PYTT_0458 rpla bact: ribosomal protein ul1 K02863 RP-L1; large subunit ribosomal protein L1
D PYTT_0892 rplb bact: ribosomal protein ul2 K02886 RP-L2; large subunit ribosomal protein L2
D PYTT_0895 l3 bact: 50s ribosomal protein ul3 K02906 RP-L3; large subunit ribosomal protein L3
D PYTT_0894 rpld bact: 50s ribosomal protein ul4 K02926 RP-L4; large subunit ribosomal protein L4
D PYTT_0930 ribosomal protein l5 domain K02931 RP-L5; large subunit ribosomal protein L5
D PYTT_0928 l6 bact: ribosomal protein ul6 K02933 RP-L6; large subunit ribosomal protein L6
D PYTT_0456 l12: ribosomal protein bl12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PYTT_0938 l9: ribosomal protein bl9 K02939 RP-L9; large subunit ribosomal protein L9
D PYTT_0457 beta-defensin antibiotic precursor antimicrobial defensin beta signal defensin bd-32 defb-32 K02864 RP-L10; large subunit ribosomal protein L10
D PYTT_0459 l11 bact: ribosomal protein ul11 K02867 RP-L11; large subunit ribosomal protein L11
D PYTT_0675 ribosomal protein l13 K02871 RP-L13; large subunit ribosomal protein L13
D PYTT_0884 ribosomal protein l14p K02874 RP-L14; large subunit ribosomal protein L14
D PYTT_0925 ribosomal protein l18e/l15p K02876 RP-L15; large subunit ribosomal protein L15
D PYTT_0887 ribosomal protein l10e/l16 K02878 RP-L16; large subunit ribosomal protein L16
D PYTT_0423 ribosomal protein l17 K02879 RP-L17; large subunit ribosomal protein L17
D PYTT_0927 ribosomal l18 of archaea bacteria mitoch. and chloroplast K02881 RP-L18; large subunit ribosomal protein L18
D PYTT_0497 translation protein sh3-like domain K02884 RP-L19; large subunit ribosomal protein L19
D PYTT_2294 rplt bact: ribosomal protein bl20 K02887 RP-L20; large subunit ribosomal protein L20
D PYTT_0491 ribosomal prokaryotic l21 protein K02888 RP-L21; large subunit ribosomal protein L21
D PYTT_0889 ribosomal protein l22/l17 K02890 RP-L22; large subunit ribosomal protein L22
D PYTT_0893 ribosomal protein l23 K02892 RP-L23; large subunit ribosomal protein L23
D PYTT_0931 rplx bact: ribosomal protein ul24 K02895 RP-L24; large subunit ribosomal protein L24
D PYTT_0259 bl25 bact ctc: ribosomal protein bl25 ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D PYTT_0492 ribosomal l27 protein K02899 RP-L27; large subunit ribosomal protein L27
D PYTT_1109 50s ribosomal protein l28 K02902 RP-L28; large subunit ribosomal protein L28
D PYTT_0886 ribosomal protein l29 K02904 RP-L29; large subunit ribosomal protein L29
D PYTT_0393 ribosomal protein l31 K02909 RP-L31; large subunit ribosomal protein L31
D PYTT_1847 ribosomal protein l32p K02911 RP-L32; large subunit ribosomal protein L32
D PYTT_1594 rpmg bact: ribosomal protein bl33 K02913 RP-L33; large subunit ribosomal protein L33
D PYTT_2074 ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34
D PYTT_2293 rpmi bact: ribosomal protein bl35 K02916 RP-L35; large subunit ribosomal protein L35
D PYTT_0918 ribosomal protein l36 K02919 RP-L36; large subunit ribosomal protein L36
D PYTT_0756 PYTT_0756 K01977 16SrRNA; 16S ribosomal RNA
D PYTT_0753 PYTT_0753 K01980 23SrRNA; 23S ribosomal RNA
D PYTT_0752 PYTT_0752 K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:agl00970]
D PYTT_0668 PYTT_0668 K14218 tRNA-Ala; tRNA Ala
D PYTT_2188 PYTT_2188 K14218 tRNA-Ala; tRNA Ala
D PYTT_0755 PYTT_0755 K14218 tRNA-Ala; tRNA Ala
D PYTT_0992 PYTT_0992 K14218 tRNA-Ala; tRNA Ala
D PYTT_2064 PYTT_2064 K14218 tRNA-Ala; tRNA Ala
D PYTT_0493 PYTT_0493 K14219 tRNA-Arg; tRNA Arg
D PYTT_1597 PYTT_1597 K14219 tRNA-Arg; tRNA Arg
D PYTT_1930 PYTT_1930 K14219 tRNA-Arg; tRNA Arg
D PYTT_0229 PYTT_0229 K14219 tRNA-Arg; tRNA Arg
D PYTT_1783 PYTT_1783 K14220 tRNA-Asn; tRNA Asn
D PYTT_1891 PYTT_1891 K14221 tRNA-Asp; tRNA Asp
D PYTT_2244 PYTT_2244 K14222 tRNA-Cys; tRNA Cys
D PYTT_1756 PYTT_1756 K14224 tRNA-Glu; tRNA Glu
D PYTT_0635 PYTT_0635 K14225 tRNA-Gly; tRNA Gly
D PYTT_2078 PYTT_2078 K14225 tRNA-Gly; tRNA Gly
D PYTT_2079 PYTT_2079 K14225 tRNA-Gly; tRNA Gly
D PYTT_0634 PYTT_0634 K14225 tRNA-Gly; tRNA Gly
D PYTT_0366 PYTT_0366 K14226 tRNA-His; tRNA His
D PYTT_0754 PYTT_0754 K14227 tRNA-Ile; tRNA Ile
D PYTT_0991 PYTT_0991 K14227 tRNA-Ile; tRNA Ile
D PYTT_2065 PYTT_2065 K14227 tRNA-Ile; tRNA Ile
D PYTT_1849 PYTT_1849 K14228 tRNA-Leu; tRNA Leu
D PYTT_1306 PYTT_1306 K14228 tRNA-Leu; tRNA Leu
D PYTT_1684 PYTT_1684 K14228 tRNA-Leu; tRNA Leu
D PYTT_0556 PYTT_0556 K14229 tRNA-Lys; tRNA Lys
D PYTT_0557 PYTT_0557 K14229 tRNA-Lys; tRNA Lys
D PYTT_1961 PYTT_1961 K14229 tRNA-Lys; tRNA Lys
D PYTT_0211 PYTT_0211 K14230 tRNA-Met; tRNA Met
D PYTT_0411 PYTT_0411 K14230 tRNA-Met; tRNA Met
D PYTT_2306 PYTT_2306 K14230 tRNA-Met; tRNA Met
D PYTT_1063 PYTT_1063 K14231 tRNA-Phe; tRNA Phe
D PYTT_1062 PYTT_1062 K14232 tRNA-Pro; tRNA Pro
D PYTT_1318 PYTT_1318 K14232 tRNA-Pro; tRNA Pro
D PYTT_0414 PYTT_0414 K14232 tRNA-Pro; tRNA Pro
D PYTT_2003 PYTT_2003 K14233 tRNA-Ser; tRNA Ser
D PYTT_2426 PYTT_2426 K14233 tRNA-Ser; tRNA Ser
D PYTT_2424 PYTT_2424 K14233 tRNA-Ser; tRNA Ser
D PYTT_2530 PYTT_2530 K14234 tRNA-Thr; tRNA Thr
D PYTT_0558 PYTT_0558 K14234 tRNA-Thr; tRNA Thr
D PYTT_0464 PYTT_0464 K14234 tRNA-Thr; tRNA Thr
D PYTT_0462 PYTT_0462 K14235 tRNA-Trp; tRNA Trp
D PYTT_1781 PYTT_1781 K14236 tRNA-Tyr; tRNA Tyr
D PYTT_0814 PYTT_0814 K14237 tRNA-Val; tRNA Val
D PYTT_1631 PYTT_1631 K14237 tRNA-Val; tRNA Val
D PYTT_1476 PYTT_1476 K14237 tRNA-Val; tRNA Val
D PYTT_2081 glutamyl-trna synthetase signature K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PYTT_0617 gata: aspartyl/glutamyl-trna(asn/gln) amidotransferase a subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PYTT_2141 gatb: aspartyl/glutamyl-trna(asn/gln) amidotransferase b subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PYTT_0616 gatc: aspartyl/glutamyl-trna(asn/gln) amidotransferase c subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PYTT_0248 glns: glutamine--trna ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PYTT_0967 alas: alanine--trna ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PYTT_1768 asps bact: aspartate--trna ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PYTT_1477 asns: asparagine--trna ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PYTT_0723 glys dimeric: glycine--trna ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PYTT_2313 thrs: threonine--trna ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PYTT_2152 sers: serine--trna ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PYTT_0247 cyss: cysteine--trna ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PYTT_2020 metg: methionine--trna ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PYTT_1675 fmt: methionyl-trna formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PYTT_2367 vals: valine--trna ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PYTT_0718 leus bact: leucine--trna ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PYTT_1567 iles: isoleucine--trna ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PYTT_1808 lyss bact: lysine--trna ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PYTT_1220 args: arginine--trna ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PYTT_0136 pros fam i: proline--trna ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PYTT_1769 hiss: histidine--trna ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PYTT_2350 phes: phenylalanine--trna ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PYTT_2349 phet bact: phenylalanine--trna ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PYTT_0907 tyrs: tyrosine--trna ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PYTT_1729 trps: tryptophan--trna ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:agl03060]
D PYTT_0924 secy subunit domain K03076 secY; preprotein translocase subunit SecY
D PYTT_1406 secg: preprotein translocase secg subunit K03075 secG; preprotein translocase subunit SecG
D PYTT_1202 bacterial translocase secf protein signature K12257 secDF; SecD/SecF fusion protein
D PYTT_0222 preprotein translocase yajc K03210 yajC; preprotein translocase subunit YajC
D PYTT_2071 60kd inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PYTT_0297 seca: preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PYTT_0495 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PYTT_0382 ftsy: signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D PYTT_2368 tatae: twin arginine-targeting protein translocase tata/e family K03116 tatA; sec-independent protein translocase protein TatA
D PYTT_1903 sec-independent protein translocase protein (tatc) K03118 tatC; sec-independent protein translocase protein TatC
D PYTT_2047 peptidase s24/s26a/s26b/s26c K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PYTT_1568 signal peptidase (spase) ii K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:agl04122]
D PYTT_0330 pyridoxal phosphate-dependent transferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PYTT_0976 trna methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PYTT_0090 thif-type nad/fad binding fold K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D PYTT_2478 molybdopterin synthase/thiamin biosynthesis sulphur carrier beta-grasp K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:agl03018]
D PYTT_2322 nudix box signature. K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PYTT_1409 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PYTT_1840 polynuc phos: polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PYTT_2507 dead/deah box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PYTT_2100 dead/deah box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PYTT_0451 3 prime rnase: vacb and rnase ii family 3'-5' exoribonucleases K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PYTT_1732 dead/deah box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PYTT_1152 dead/deah box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PYTT_1275 dead/deah box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PYTT_0372 tigr00152: dephospho-coa kinase K03628 rho; transcription termination factor Rho
D PYTT_1320 aaa+ atpase domain K03628 rho; transcription termination factor Rho
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0692 prok dnak: chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D PYTT_0694 groel: chaperonin grol K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PYTT_1549 poly p kin: polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PYTT_1842 poly a polymerase head domain K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:agl03030]
D PYTT_0519 exonuclease rnase t/dna polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PYTT_1859 polc: dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PYTT_1316 dnax nterm: dna polymerase iii subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PYTT_0021 dna polymerase iii delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PYTT_1210 hola: dna polymerase iii delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PYTT_1078 dnan: dna polymerase iii beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PYTT_1465 dnab: replicative dna helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PYTT_2328 zinc finger chc2-type K02316 dnaG; DNA primase [EC:2.7.7.101]
D PYTT_0729 ssb: single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein
D PYTT_0912 ribonuclease hii K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PYTT_0734 rnhc: ribonuclease hiii K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D PYTT_0599 pola: dna polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PYTT_2131 zinc-finger nad-dependent dna ligase c4-type K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:agl03410]
D PYTT_1835 dna glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PYTT_1978 uracil-dna glycosylase-like K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D PYTT_0486 dna glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PYTT_2242 dna glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PYTT_2121 hypoxandnaglyco: dna-deoxyinosine glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D PYTT_0379 uracil-dna glycosylase-like K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PYTT_0826 endonuclease/exonuclease/phosphatase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PYTT_2549 ap endonuclease 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PYTT_0599 pola: dna polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PYTT_0646 recj: single-stranded-dna-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PYTT_2131 zinc-finger nad-dependent dna ligase c4-type K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:agl03420]
D PYTT_2070 mfd: transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PYTT_2464 abc transporter K03701 uvrA; excinuclease ABC subunit A
D PYTT_0013 abc transporters family signature. K03701 uvrA; excinuclease ABC subunit A
D PYTT_0467 ultra-violet resistance protein b K03702 uvrB; excinuclease ABC subunit B
D PYTT_2466 uvrb/uvrc motif K03703 uvrC; excinuclease ABC subunit C
D PYTT_1674 p-loop containing nucleoside triphosphate hydrolase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PYTT_0957 p-loop containing nucleoside triphosphate hydrolase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PYTT_0599 pola: dna polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PYTT_2131 zinc-finger nad-dependent dna ligase c4-type K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:agl03430]
D PYTT_1615 muts1: dna mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS
D PYTT_2477 mutl: dna mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL
D PYTT_1674 p-loop containing nucleoside triphosphate hydrolase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PYTT_0957 p-loop containing nucleoside triphosphate hydrolase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PYTT_0939 xsea: exodeoxyribonuclease vii large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PYTT_0418 exonuclease vii small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PYTT_0646 recj: single-stranded-dna-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PYTT_0729 ssb: single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein
D PYTT_1859 polc: dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PYTT_1078 dnan: dna polymerase iii beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PYTT_1316 dnax nterm: dna polymerase iii subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PYTT_1210 hola: dna polymerase iii delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PYTT_0021 dna polymerase iii delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PYTT_0519 exonuclease rnase t/dna polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PYTT_2131 zinc-finger nad-dependent dna ligase c4-type K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PYTT_2403 s-adenosyl-l-methionine-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:agl03440]
D PYTT_0646 recj: single-stranded-dna-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PYTT_0729 ssb: single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein
D PYTT_2343 recf: dna replication and repair protein recf K03629 recF; DNA replication and repair protein RecF
D PYTT_0421 nucleic acid-binding ob-fold K03584 recO; DNA repair protein RecO (recombination protein O)
D PYTT_1588 recombination protein recr c4-type zinc finger K06187 recR; recombination protein RecR
D PYTT_1111 tigrfam reca: protein reca K03553 recA; recombination protein RecA
D PYTT_0599 pola: dna polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PYTT_1881 ruva: holliday junction dna helicase ruva K03550 ruvA; holliday junction DNA helicase RuvA
D PYTT_2126 ruvb: holliday junction dna helicase ruvb K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PYTT_2099 ruvc: crossover junction endodeoxyribonuclease ruvc K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PYTT_1679 dead/deah box helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PYTT_1859 polc: dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PYTT_1078 dnan: dna polymerase iii beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PYTT_1316 dnax nterm: dna polymerase iii subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PYTT_1210 hola: dna polymerase iii delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PYTT_0021 dna polymerase iii delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PYTT_0519 exonuclease rnase t/dna polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PYTT_1975 pria: primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:agl02010]
D PYTT_1618 nmt1-like family K15553 ssuA; sulfonate transport system substrate-binding protein
D PYTT_1620 binding-protein-dependent transport system inner membrane component K15554 ssuC; sulfonate transport system permease protein
D PYTT_1619 abc transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PYTT_0875 bacterial extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PYTT_0874 binding-protein-dependent transport system inner membrane component K02011 afuB; iron(III) transport system permease protein
D PYTT_0873 abc transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PYTT_0840 3a0107s03: phosphate abc transporter phosphate-binding protein psts K02040 pstS; phosphate transport system substrate-binding protein
D PYTT_0839 phosphate pstc: phosphate abc transporter permease protein pstc K02037 pstC; phosphate transport system permease protein
D PYTT_0838 3a0107s02c: phosphate abc transporter permease protein psta K02038 pstA; phosphate transport system permease protein
D PYTT_0837 abc transporter K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PYTT_0438 bacterial extracellular solute-binding proteins family 5 middle K15580 oppA; oligopeptide transport system substrate-binding protein
D PYTT_0437 binding-protein-dependent transport system inner membrane component K15581 oppB; oligopeptide transport system permease protein
D PYTT_0436 binding-protein-dependent transport system inner membrane component K15582 oppC; oligopeptide transport system permease protein
D PYTT_1944 abc transporter K15583 oppD; oligopeptide transport system ATP-binding protein
D PYTT_1113 bacterial extracellular solute-binding proteins family 5 middle K13893 yejA; microcin C transport system substrate-binding protein
D PYTT_2090 bacterial extracellular solute-binding proteins family 5 middle K13893 yejA; microcin C transport system substrate-binding protein
D PYTT_2092 binding-protein-dependent transport system inner membrane component K13894 yejB; microcin C transport system permease protein
D PYTT_2091 binding-protein-dependent transport system inner membrane component K13895 yejE; microcin C transport system permease protein
D PYTT_2456 abc transporter btuc-like K19976 mntB; manganese transport system permease protein
D PYTT_2457 abc transporter K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PYTT_1118 cobalt uptake substrate-specific transmembrane region K02007 cbiM; cobalt/nickel transport system permease protein
D PYTT_1119 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D PYTT_1120 abc transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PYTT_1130 ftsx-like permease family K09808 lolC_E; lipoprotein-releasing system permease protein
D PYTT_0263 predicted permease yjgp/yjgq family K07091 lptF; lipopolysaccharide export system permease protein
D PYTT_0152 predicted permease yjgp/yjgq family K11720 lptG; lipopolysaccharide export system permease protein
D PYTT_1013 abc transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PYTT_0586 abc transporter transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PYTT_0587 abc transporter transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:agl02060]
D PYTT_1989 pts i fam: phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PYTT_1988 phosphocarrier protein hpr-like K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:agl03070]
D PYTT_0789 bacterial type ii and iii secretion system protein K02453 gspD; general secretion pathway protein D
D PYTT_1774 bacterial type ii and iii secretion system protein K02453 gspD; general secretion pathway protein D
D PYTT_0268 bacterial general secretion pathway protein g signature K02456 gspG; general secretion pathway protein G
D PYTT_1202 bacterial translocase secf protein signature K12257 secDF; SecD/SecF fusion protein
D PYTT_1406 secg: preprotein translocase secg subunit K03075 secG; preprotein translocase subunit SecG
D PYTT_0924 secy subunit domain K03076 secY; preprotein translocase subunit SecY
D PYTT_0222 preprotein translocase yajc K03210 yajC; preprotein translocase subunit YajC
D PYTT_2071 60kd inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PYTT_0297 seca: preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PYTT_0382 ftsy: signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D PYTT_0495 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PYTT_2368 tatae: twin arginine-targeting protein translocase tata/e family K03116 tatA; sec-independent protein translocase protein TatA
D PYTT_1903 sec-independent protein translocase protein (tatc) K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:agl02020]
D PYTT_0829 pas domain K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PYTT_0835 transcriptional regulatory protein c terminal K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PYTT_1086 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PYTT_0840 3a0107s03: phosphate abc transporter phosphate-binding protein psts K02040 pstS; phosphate transport system substrate-binding protein
D PYTT_1209 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_0063 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_2057 osmosensitive k+ channel his kinase sensor domain K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PYTT_2058 transcriptional regulatory protein c terminal K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PYTT_2059 kdpa: k+-transporting atpase a subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PYTT_2060 kdpb: k+-transporting atpase b subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PYTT_2061 kdpc: k+-transporting atpase c subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PYTT_0001 trp repressor/replication initiator K02313 dnaA; chromosomal replication initiator protein
D PYTT_0666 rnd mfp: efflux transporter rnd family mfp subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D PYTT_0667 2a0602: rnd transporter hydrophobe/amphiphile efflux-1 (hae1) family K18095 mexY; multidrug efflux pump
D PYTT_0047 glutamine synthetase glycine-rich site K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PYTT_2138 fis bacterial regulatory protein hth signature K02584 nifA; Nif-specific regulatory protein
D PYTT_2553 rpon sigma: rna polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PYTT_0843 hyda: hydrogenase (nife) small subunit (hyda) K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D PYTT_0844 nickel-dependent hydrogenase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PYTT_0845 di-haem cytochrome transmembrane K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D PYTT_2324 gln ase: glutaminase a K01425 glsA; glutaminase [EC:3.5.1.2]
D PYTT_0251 cytochrome bd terminal oxidase subunit i K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PYTT_0252 cytochrome bd terminal oxidase subunit ii K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PYTT_0629 Hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D PYTT_1546 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:agl02024]
D PYTT_1624 adc synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PYTT_0506 aldolase-type tim barrel K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PYTT_2058 transcriptional regulatory protein c terminal K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PYTT_2046 pyridoxal phosphate-dependent transferase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PYTT_2325 amino acid permease K20265 gadC; glutamate:GABA antiporter
D PYTT_1212 eubact ribd: riboflavin biosynthesis protein ribd K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PYTT_1960 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_2007 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_0438 bacterial extracellular solute-binding proteins family 5 middle K15580 oppA; oligopeptide transport system substrate-binding protein
D PYTT_0437 binding-protein-dependent transport system inner membrane component K15581 oppB; oligopeptide transport system permease protein
D PYTT_0436 binding-protein-dependent transport system inner membrane component K15582 oppC; oligopeptide transport system permease protein
D PYTT_1944 abc transporter K15583 oppD; oligopeptide transport system ATP-binding protein
D PYTT_2089 abc transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PYTT_2088 abc transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PYTT_1156 abc transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PYTT_2071 60kd inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PYTT_1202 bacterial translocase secf protein signature K12257 secDF; SecD/SecF fusion protein
D PYTT_1406 secg: preprotein translocase secg subunit K03075 secG; preprotein translocase subunit SecG
D PYTT_0924 secy subunit domain K03076 secY; preprotein translocase subunit SecY
D PYTT_0222 preprotein translocase yajc K03210 yajC; preprotein translocase subunit YajC
D PYTT_0297 seca: preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PYTT_0382 ftsy: signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D PYTT_0495 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:agl02040]
D PYTT_0788 rna polymerase sigma factor region 2 K03086 rpoD; RNA polymerase primary sigma factor
D PYTT_2553 rpon sigma: rna polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PYTT_1409 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:agl04980]
D PYTT_0719 pduo nterm: atp:cob(i)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PYTT_2008 lao: lao/ao transport system atpase K07588 MMAA; GTPase [EC:3.6.5.-]
D PYTT_1455 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_1456 methylmalonyl-coa mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PYTT_1922 meth: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:agl01501]
D PYTT_2532 glycoside hydrolase superfamily K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PYTT_0438 bacterial extracellular solute-binding proteins family 5 middle K15580 oppA; oligopeptide transport system substrate-binding protein
D PYTT_0437 binding-protein-dependent transport system inner membrane component K15581 oppB; oligopeptide transport system permease protein
D PYTT_0436 binding-protein-dependent transport system inner membrane component K15582 oppC; oligopeptide transport system permease protein
D PYTT_1944 abc transporter K15583 oppD; oligopeptide transport system ATP-binding protein
D PYTT_1668 beta-lactamase class a signature K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PYTT_0665 tetr bacterial regulatory protein hth signature K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D PYTT_0666 rnd mfp: efflux transporter rnd family mfp subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D PYTT_0667 2a0602: rnd transporter hydrophobe/amphiphile efflux-1 (hae1) family K18095 mexY; multidrug efflux pump
D PYTT_2005 rnd mfp: efflux transporter rnd family mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PYTT_1960 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_2007 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_0375 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2146 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2471 transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PYTT_2331 beta-lactamase/transpeptidase-like K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:agl01502]
D PYTT_0942 d ala d alatigr: d-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PYTT_2119 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PYTT_2282 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PYTT_0950 murf: udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PYTT_0949 mray: phospho-n-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PYTT_0945 murg: undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:agl01503]
D PYTT_1643 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1374 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1091 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1209 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_0063 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_2005 rnd mfp: efflux transporter rnd family mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PYTT_1142 lipid a lpxa: acyl-[acyl-carrier-protein]-udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:agl01000]
C 01001 Protein kinases [BR:agl01001]
D PYTT_2124 serine/threonine protein kinases active-site signature. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PYTT_2540 protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PYTT_1041 serine/threonine protein kinases active-site signature. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PYTT_0631 chain length determinant protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PYTT_0829 pas domain K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PYTT_2057 osmosensitive k+ channel his kinase sensor domain K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:agl01009]
D PYTT_1052 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_1809 protein phosphatase 2c K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:agl01002]
D PYTT_1568 signal peptidase (spase) ii K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PYTT_2287 type iv leader peptidase family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PYTT_0846 hydrogen uptake protein signature K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D PYTT_1508 glutamine amidotransferase class-i K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PYTT_0530 glutamine amidotransferases class-ii K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PYTT_0048 glutamine amidotransferases class-ii K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PYTT_1179 protein deglycase dj-1 K03152 thiJ; protein deglycase [EC:3.5.1.124]
D PYTT_1745 caax protease self-immunity K07052 K07052; CAAX protease family protein
D PYTT_1160 peptidase family m3 K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PYTT_1161 peptidase family m3 K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PYTT_1162 peptidase family m3 K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PYTT_1163 peptidase family m3 K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PYTT_1164 peptidase family m3 K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PYTT_1165 peptidase family m3 K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PYTT_1023 peptidase m16 domain K07263 pqqL; zinc protease [EC:3.4.24.-]
D PYTT_1928 peptidase m16 domain K07263 pqqL; zinc protease [EC:3.4.24.-]
D PYTT_0922 met pdase i: methionine aminopeptidase type i K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PYTT_0969 aminopeptidase p and proline dipeptidase signature. K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PYTT_2162 peptidase family m28 K00683 QPCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D PYTT_1279 thermophilic metalloprotease (m29) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D PYTT_0291 ftsh fam: atp-dependent metallopeptidase hflb K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PYTT_0133 tigr00054: rip metalloprotease rsep K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PYTT_1209 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_0063 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_2501 d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PYTT_0732 d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PYTT_2576 clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PYTT_1571 peptidase s24/s26a/s26b/s26c K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PYTT_2047 peptidase s24/s26a/s26b/s26c K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PYTT_0426 tail specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PYTT_2249 peptidase s54 rhomboid domain K07059 K07059; rhomboid family protein
D PYTT_1810 peptidase u32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PYTT_1040 peptidase u32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PYTT_0690 terpenoid cyclases/protein prenyltransferase alpha-alpha toroid K06894 yfhM; alpha-2-macroglobulin
D PYTT_1343 terpenoid cyclases/protein prenyltransferase alpha-alpha toroid K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:agl01003]
D PYTT_0628 monogalactosyldiacylglycerol (mgdg) synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PYTT_0997 glycosyl transferases group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D PYTT_2446 transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PYTT_0375 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2146 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2471 transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PYTT_1548 glycosyl transferase wecb/taga/cpsf K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PYTT_0916 nucleotide-diphospho-sugar transferases K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:agl01005]
D PYTT_1142 lipid a lpxa: acyl-[acyl-carrier-protein]-udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PYTT_0275 lpxb: lipid-a-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PYTT_2075 lpxc: udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PYTT_1248 lipid a lpxd: udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase lpxd K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PYTT_0825 protein of unknown function (duf1009) K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PYTT_1912 tetraacyldisaccharide-1-p 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PYTT_0207 bacterial lipid a biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PYTT_1082 uncharacterized protein conserved in bacteria (duf2219) K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D PYTT_0156 3-deoxy-d-manno-octulosonic-acid transferase (kdotransferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PYTT_1009 aldolase-type tim barrel K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PYTT_0312 nucleotide-diphospho-sugar transferases K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PYTT_0269 sugar isomerase (sis) K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PYTT_1186 nucleotide-diphospho-sugar transferases K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:agl01011]
D PYTT_2499 rna 3'-terminal phosphate cyclase/enolpyruvate transferase alpha/beta K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PYTT_0944 murc: udp-n-acetylmuramate--l-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PYTT_0948 murd: udp-n-acetylmuramoylalanine--d-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PYTT_0951 mure: udp-n-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PYTT_0942 d ala d alatigr: d-alanine--d-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PYTT_2119 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PYTT_2282 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PYTT_0949 mray: phospho-n-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PYTT_0945 murg: undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PYTT_1986 bacitracin resistance protein baca K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PYTT_0089 murj mvin: murein biosynthesis integral membrane protein murj K03980 murJ; putative peptidoglycan lipid II flippase
D PYTT_0375 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2146 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PYTT_2446 transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PYTT_2471 transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PYTT_2331 beta-lactamase/transpeptidase-like K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PYTT_0952 beta-lactamase/transpeptidase-like K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D PYTT_2501 d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PYTT_0732 d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PYTT_2445 rlpa: rare lipoprotein a K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PYTT_1643 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1374 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1091 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:agl01004]
D PYTT_1892 fabd: malonyl coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PYTT_0684 fabh: 3-oxoacyl-[acyl-carrier-protein] synthase iii K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PYTT_1586 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PYTT_1681 3oxo acp reduc: 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PYTT_2075 lpxc: udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PYTT_0007 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PYTT_1784 hotdog domain K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PYTT_1846 fatty acid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PYTT_0147 tigr00023: acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PYTT_2344 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:agl01006]
D PYTT_0031 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PYTT_1150 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PYTT_0805 upps: di-trans poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PYTT_1876 squalene/phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D PYTT_2048 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PYTT_0975 miaa: trna dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PYTT_0395 mena: 1 4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:agl01007]
D PYTT_0248 glns: glutamine--trna ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PYTT_2081 glutamyl-trna synthetase signature K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PYTT_0901 glutamyl-trna synthetase signature K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PYTT_0907 tyrs: tyrosine--trna ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PYTT_1729 trps: tryptophan--trna ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PYTT_0247 cyss: cysteine--trna ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PYTT_1220 args: arginine--trna ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PYTT_2020 metg: methionine--trna ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PYTT_1567 iles: isoleucine--trna ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PYTT_2367 vals: valine--trna ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PYTT_0718 leus bact: leucine--trna ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PYTT_1808 lyss bact: lysine--trna ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PYTT_1768 asps bact: aspartate--trna ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PYTT_1477 asns: asparagine--trna ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PYTT_1769 hiss: histidine--trna ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PYTT_0723 glys dimeric: glycine--trna ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PYTT_2152 sers: serine--trna ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PYTT_0136 pros fam i: proline--trna ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PYTT_2313 thrs: threonine--trna ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PYTT_0967 alas: alanine--trna ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PYTT_2350 phes: phenylalanine--trna ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PYTT_2349 phet bact: phenylalanine--trna ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PYTT_2265 pyridoxal phosphate-dependent transferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PYTT_1793 pyridoxal phosphate-dependent transferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PYTT_2330 dapat plant: ll-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PYTT_1744 pyridoxal phosphate-dependent transferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D PYTT_1898 hisc: histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PYTT_0985 2am3keto coa: glycine c-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PYTT_2309 pyridoxal phosphate-dependent transferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PYTT_0349 pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PYTT_1483 pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PYTT_1734 pyridoxal phosphate-dependent transferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PYTT_1464 pyridoxal phosphate-dependent transferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PYTT_0641 pyridoxal phosphate-dependent transferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PYTT_2027 aminotransferase class iv K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PYTT_0872 pyridoxal phosphate-dependent transferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:agl00194]
D PYTT_1334 atp synt epsi: atp synthase f1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PYTT_1335 atpd: atp synthase f1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PYTT_1336 atp synthase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PYTT_1337 atpa: atp synthase f1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PYTT_1338 atp synthase delta (oscp) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PYTT_1339 atp synthase b/b' cf(0) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PYTT_1340 atpase f0 complex subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PYTT_1341 atp synt 6 or a: atp synthase f0 a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:agl03000]
D PYTT_0665 tetr bacterial regulatory protein hth signature K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D PYTT_2555 ferric uptake regulator family K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D PYTT_0783 arsr-type transcription regulator hth motif K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D PYTT_1935 iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PYTT_0611 bira ligase: biotin--[acetyl-coa-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PYTT_2138 fis bacterial regulatory protein hth signature K02584 nifA; Nif-specific regulatory protein
D PYTT_2257 aldehyde/histidinol dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PYTT_2161 parb/sulfiredoxin K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PYTT_0443 phosphoribosyltransferase-like K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PYTT_0022 tigr00244: transcriptional regulator nrdr K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:agl03021]
D PYTT_0681 metallo-beta-lactamase K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D PYTT_0424 rna polymerase alpha dna-directed subunit chain nucleotidyltransferase transferase transcription transcriptase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PYTT_0455 rpob: dna-directed rna polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PYTT_0454 rpoc tigr: dna-directed rna polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PYTT_1468 rna polymerase subunit omega/k/rpb6 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PYTT_0788 rna polymerase sigma factor region 2 K03086 rpoD; RNA polymerase primary sigma factor
D PYTT_0531 rna polymerase sigma factor region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PYTT_2553 rpon sigma: rna polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PYTT_2278 nusa: transcription termination factor nusa K02600 nusA; transcription termination/antitermination protein NusA
D PYTT_0381 nusb/rsmb/tim44 K03625 nusB; transcription antitermination protein NusB
D PYTT_0460 nusg: transcription termination/antitermination factor nusg K02601 nusG; transcription termination/antitermination protein NusG
D PYTT_0428 stage ii sporulation protein e (spoiie) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PYTT_0372 tigr00152: dephospho-coa kinase K03628 rho; transcription termination factor Rho
D PYTT_1320 aaa+ atpase domain K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:agl03019]
D PYTT_0681 metallo-beta-lactamase K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D PYTT_1579 rnaseeg: ribonuclease rne/rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D PYTT_0061 rnaseiii: ribonuclease iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PYTT_0451 3 prime rnase: vacb and rnase ii family 3'-5' exoribonucleases K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PYTT_0962 hd/pdease domain K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D PYTT_2507 dead/deah box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PYTT_2100 dead/deah box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PYTT_1732 dead/deah box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PYTT_1152 dead/deah box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PYTT_1275 dead/deah box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PYTT_1409 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PYTT_1840 polynuc phos: polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PYTT_0372 tigr00152: dephospho-coa kinase K03628 rho; transcription termination factor Rho
D PYTT_1320 aaa+ atpase domain K03628 rho; transcription termination factor Rho
D PYTT_1977 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PYTT_0692 prok dnak: chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D PYTT_0694 groel: chaperonin grol K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PYTT_1549 poly p kin: polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PYTT_1842 poly a polymerase head domain K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PYTT_2322 nudix box signature. K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PYTT_1225 deah box hrpa: rna helicase hrpa K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PYTT_0284 deah box hrpb: atp-dependent helicase hrpb K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:agl03011]
D PYTT_2111 rpsa: ribosomal protein bs1 K02945 RP-S1; small subunit ribosomal protein S1
D PYTT_1529 rpsb bact: ribosomal protein us2 K02967 RP-S2; small subunit ribosomal protein S2
D PYTT_0888 rpsc bact: ribosomal protein us3 K02982 RP-S3; small subunit ribosomal protein S3
D PYTT_2096 rpsd bact: ribosomal protein us4 K02986 RP-S4; small subunit ribosomal protein S4
D PYTT_0926 rpse bact: ribosomal protein us5 K02988 RP-S5; small subunit ribosomal protein S5
D PYTT_0642 ribosomal protein s6 K02990 RP-S6; small subunit ribosomal protein S6
D PYTT_0898 rpsg bact: ribosomal protein us7 K02992 RP-S7; small subunit ribosomal protein S7
D PYTT_0929 ribosomal protein s8 K02994 RP-S8; small subunit ribosomal protein S8
D PYTT_0674 ribosomal protein s9/s16 K02996 RP-S9; small subunit ribosomal protein S9
D PYTT_0896 rpsj bact: ribosomal protein us10 K02946 RP-S10; small subunit ribosomal protein S10
D PYTT_2097 ribosomal protein s11 K02948 RP-S11; small subunit ribosomal protein S11
D PYTT_0899 nucleic acid-binding ob-fold K02950 RP-S12; small subunit ribosomal protein S12
D PYTT_2098 us13 bact: ribosomal protein us13 K02952 RP-S13; small subunit ribosomal protein S13
D PYTT_1719 ribosomal protein s14p/s29e K02954 RP-S14; small subunit ribosomal protein S14
D PYTT_0793 ribosomal protein s15 K02956 RP-S15; small subunit ribosomal protein S15
D PYTT_0769 s16: ribosomal protein bs16 K02959 RP-S16; small subunit ribosomal protein S16
D PYTT_0885 ribosomal protein s17/s11 K02961 RP-S17; small subunit ribosomal protein S17
D PYTT_1593 ribosomal protein s18 K02963 RP-S18; small subunit ribosomal protein S18
D PYTT_0891 rpss bact: ribosomal protein us19 K02965 RP-S19; small subunit ribosomal protein S19
D PYTT_1761 ribosomal protein s20 K02968 RP-S20; small subunit ribosomal protein S20
D PYTT_0640 s21p: ribosomal protein bs21 K02970 RP-S21; small subunit ribosomal protein S21
D PYTT_0458 rpla bact: ribosomal protein ul1 K02863 RP-L1; large subunit ribosomal protein L1
D PYTT_0892 rplb bact: ribosomal protein ul2 K02886 RP-L2; large subunit ribosomal protein L2
D PYTT_0895 l3 bact: 50s ribosomal protein ul3 K02906 RP-L3; large subunit ribosomal protein L3
D PYTT_0894 rpld bact: 50s ribosomal protein ul4 K02926 RP-L4; large subunit ribosomal protein L4
D PYTT_0930 ribosomal protein l5 domain K02931 RP-L5; large subunit ribosomal protein L5
D PYTT_0928 l6 bact: ribosomal protein ul6 K02933 RP-L6; large subunit ribosomal protein L6
D PYTT_0938 l9: ribosomal protein bl9 K02939 RP-L9; large subunit ribosomal protein L9
D PYTT_0457 beta-defensin antibiotic precursor antimicrobial defensin beta signal defensin bd-32 defb-32 K02864 RP-L10; large subunit ribosomal protein L10
D PYTT_0459 l11 bact: ribosomal protein ul11 K02867 RP-L11; large subunit ribosomal protein L11
D PYTT_0456 l12: ribosomal protein bl12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PYTT_0675 ribosomal protein l13 K02871 RP-L13; large subunit ribosomal protein L13
D PYTT_0884 ribosomal protein l14p K02874 RP-L14; large subunit ribosomal protein L14
D PYTT_0925 ribosomal protein l18e/l15p K02876 RP-L15; large subunit ribosomal protein L15
D PYTT_0887 ribosomal protein l10e/l16 K02878 RP-L16; large subunit ribosomal protein L16
D PYTT_0423 ribosomal protein l17 K02879 RP-L17; large subunit ribosomal protein L17
D PYTT_0927 ribosomal l18 of archaea bacteria mitoch. and chloroplast K02881 RP-L18; large subunit ribosomal protein L18
D PYTT_0497 translation protein sh3-like domain K02884 RP-L19; large subunit ribosomal protein L19
D PYTT_2294 rplt bact: ribosomal protein bl20 K02887 RP-L20; large subunit ribosomal protein L20
D PYTT_0491 ribosomal prokaryotic l21 protein K02888 RP-L21; large subunit ribosomal protein L21
D PYTT_0889 ribosomal protein l22/l17 K02890 RP-L22; large subunit ribosomal protein L22
D PYTT_0893 ribosomal protein l23 K02892 RP-L23; large subunit ribosomal protein L23
D PYTT_0931 rplx bact: ribosomal protein ul24 K02895 RP-L24; large subunit ribosomal protein L24
D PYTT_0492 ribosomal l27 protein K02899 RP-L27; large subunit ribosomal protein L27
D PYTT_1109 50s ribosomal protein l28 K02902 RP-L28; large subunit ribosomal protein L28
D PYTT_0886 ribosomal protein l29 K02904 RP-L29; large subunit ribosomal protein L29
D PYTT_0393 ribosomal protein l31 K02909 RP-L31; large subunit ribosomal protein L31
D PYTT_1847 ribosomal protein l32p K02911 RP-L32; large subunit ribosomal protein L32
D PYTT_1594 rpmg bact: ribosomal protein bl33 K02913 RP-L33; large subunit ribosomal protein L33
D PYTT_2074 ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34
D PYTT_2293 rpmi bact: ribosomal protein bl35 K02916 RP-L35; large subunit ribosomal protein L35
D PYTT_0918 ribosomal protein l36 K02919 RP-L36; large subunit ribosomal protein L36
D PYTT_0259 bl25 bact ctc: ribosomal protein bl25 ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D PYTT_0752 PYTT_0752 K01985 5SrRNA; 5S ribosomal RNA
D PYTT_0756 PYTT_0756 K01977 16SrRNA; 16S ribosomal RNA
D PYTT_0753 PYTT_0753 K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:agl03009]
D PYTT_0061 rnaseiii: ribonuclease iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PYTT_1772 gtp1/obg K03979 obgE; GTPase [EC:3.6.5.-]
D PYTT_2278 nusa: transcription termination factor nusa K02600 nusA; transcription termination/antitermination protein NusA
D PYTT_0381 nusb/rsmb/tim44 K03625 nusB; transcription antitermination protein NusB
D PYTT_0460 nusg: transcription termination/antitermination factor nusg K02601 nusG; transcription termination/antitermination protein NusG
D PYTT_2586 tigr00093: pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PYTT_0065 s-adenosyl-l-methionine-dependent methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PYTT_0406 s-adenosyl-l-methionine-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PYTT_0157 s-adenosyl-l-methionine-dependent methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PYTT_1575 ribosomal rna small subunit methyltransferase e K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PYTT_0954 tigr00006: 16s rrna (cytosine(1402)-n(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PYTT_0017 tigr00096: 16s rrna (cytidine(1402)-2'-o)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PYTT_0077 s-adenosyl-l-methionine-dependent methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PYTT_1331 alpha/beta knot methyltransferases K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PYTT_2267 alpha/beta knot methyltransferases K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PYTT_0739 s-adenosyl-l-methionine-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PYTT_0028 s-adenosyl-l-methionine-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PYTT_1853 s-adenosyl-l-methionine-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PYTT_0384 rrna mod rlmn: 23s rrna (adenine(2503)-c(2))-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PYTT_1933 s-adenosyl-l-methionine-dependent methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PYTT_1967 tigr00093: pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PYTT_2587 rna pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PYTT_1992 rna pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PYTT_2159 tigr00089: radical sam methylthiotransferase miab/rimo family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PYTT_0376 ribosomal protein l11 methyltransferase (prma) K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PYTT_1579 rnaseeg: ribonuclease rne/rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D PYTT_0807 holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PYTT_1732 dead/deah box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PYTT_0405 tigr00157: ribosome small subunit-dependent gtpase a K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PYTT_1943 gtpase enga: ribosome-associated gtpase enga K03977 engA; GTPase
D PYTT_0479 gtp hflx: gtp-binding protein hflx K03665 hflX; GTPase
D PYTT_2290 telomere recombination K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PYTT_2276 k homology domain-like alpha/beta K02834 rbfA; ribosome-binding factor A
D PYTT_0292 rsfs iojap ybeb: ribosome silencing factor K09710 ybeB; ribosome-associated protein
D PYTT_0228 tigr00043: rrna maturation rnase ybey K07042 ybeY; probable rRNA maturation factor
D PYTT_1399 ribosomal protein s30ae/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D PYTT_0707 tigr00092: gtp-binding protein ychf K06942 ychF; ribosome-binding ATPase
D PYTT_1848 Hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:agl03016]
D PYTT_0136 pros fam i: proline--trna ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PYTT_1567 iles: isoleucine--trna ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PYTT_0718 leus bact: leucine--trna ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PYTT_2020 metg: methionine--trna ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PYTT_0248 glns: glutamine--trna ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PYTT_1220 args: arginine--trna ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PYTT_1808 lyss bact: lysine--trna ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PYTT_1768 asps bact: aspartate--trna ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PYTT_0967 alas: alanine--trna ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PYTT_1477 asns: asparagine--trna ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PYTT_0723 glys dimeric: glycine--trna ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PYTT_2313 thrs: threonine--trna ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PYTT_2152 sers: serine--trna ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PYTT_0247 cyss: cysteine--trna ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PYTT_2367 vals: valine--trna ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PYTT_1769 hiss: histidine--trna ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PYTT_2350 phes: phenylalanine--trna ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PYTT_2349 phet bact: phenylalanine--trna ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PYTT_0907 tyrs: tyrosine--trna ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PYTT_1729 trps: tryptophan--trna ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PYTT_2291 histidine triad (hit) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PYTT_0220 tigr00091: trna (guanine-n(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PYTT_2321 trna tsaa: trna-thr(ggu) m(6)t(6)a37 methyltransferase tsaa K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PYTT_0809 hist trua: trna pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PYTT_1072 trub: trna pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PYTT_0330 pyridoxal phosphate-dependent transferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PYTT_2290 telomere recombination K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PYTT_0975 miaa: trna dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PYTT_0978 mnme trme thdf: trna modification gtpase trme K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PYTT_1211 glucose inhibited division protein a K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PYTT_2073 ribonuclease p K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PYTT_1400 rnaseph: ribonuclease ph K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PYTT_0637 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PYTT_0901 glutamyl-trna synthetase signature K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PYTT_2081 glutamyl-trna synthetase signature K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PYTT_2093 aminoacyl-trna editing domain K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PYTT_0560 trna-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PYTT_1897 dihydrouridine synthase (dus) K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PYTT_1504 dihydrouridine synthase (dus) K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PYTT_0062 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PYTT_0980 s-adenosyl-l-methionine-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PYTT_0779 alpha/beta knot methyltransferases K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PYTT_1415 trna (guanine-n1-)-methyltransferase n-terminal K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PYTT_0976 trna methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PYTT_1972 s-adenosylmethionine:trna ribosyltransferase-isomerase quea K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PYTT_2143 rossmann-like alpha/beta/alpha sandwich fold K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PYTT_2310 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PYTT_0720 aldolase-type tim barrel K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PYTT_2144 quef-ii: 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PYTT_2094 tigr00276: epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PYTT_0221 tgt general: trna-guanine family transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PYTT_1317 lysidine tils n: trna(ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PYTT_0377 t6a yeaz: trna threonylcarbamoyl adenosine modification protein yeaz K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PYTT_2578 t6a tsad ygjd: trna threonylcarbamoyl adenosine modification protein tsad K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PYTT_0490 t6a yjee: trna threonylcarbamoyl adenosine modification protein yjee K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PYTT_1188 thif-type nad/fad binding fold K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PYTT_0451 3 prime rnase: vacb and rnase ii family 3'-5' exoribonucleases K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PYTT_1840 polynuc phos: polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:agl03012]
D PYTT_2277 if-2: translation initiation factor if-2 K02519 infB; translation initiation factor IF-2
D PYTT_2312 infc: translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D PYTT_1200 abc transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PYTT_0139 abc transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PYTT_1530 tsf: translation elongation factor ts K02357 tsf; elongation factor Ts
D PYTT_0463 ef-tu: translation elongation factor tu K02358 tuf; elongation factor Tu
D PYTT_0897 ef-g: translation elongation factor g K02355 fusA; elongation factor G
D PYTT_0038 prfa: peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PYTT_0702 frr: ribosome recycling factor K02838 frr; ribosome recycling factor
D PYTT_0039 rf mod prmc: protein-(glutamine-n5) methyltransferase release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PYTT_2363 peptidyl-trna hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PYTT_0676 infa: translation initiation factor if-1 K02518 infA; translation initiation factor IF-1
D PYTT_1412 nucleic acid-binding ob-fold K02518 infA; translation initiation factor IF-1
D PYTT_0706 translation elongation factor p/yeip central K02356 efp; elongation factor P
D PYTT_0778 prfb: peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:agl03110]
D PYTT_0043 chaperone clpb: atp-dependent chaperone protein clpb K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PYTT_2105 chaperonins clpa/b signature 1. K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PYTT_2577 clpx c4-type zinc finger K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PYTT_1191 90kda heat shock protein signature K09488 TRAP1; TNF receptor-associated protein 1
D PYTT_0692 prok dnak: chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D PYTT_0694 groel: chaperonin grol K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PYTT_1576 dnaj bact: chaperone protein dnaj K03686 dnaJ; molecular chaperone DnaJ
D PYTT_1516 hsp33 protein K04083 hslO; molecular chaperone Hsp33
D PYTT_1577 grpe K03687 GRPE; molecular chaperone GrpE
D PYTT_0693 groes chaperonin family K04078 groES; chaperonin GroES
D PYTT_1209 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_0063 peptidase s1 pa clan K04771 degP; serine protease Do [EC:3.4.21.107]
D PYTT_0291 ftsh fam: atp-dependent metallopeptidase hflb K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PYTT_1341 atp synt 6 or a: atp synthase f0 a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PYTT_0847 hydrogenase/urease nickel incorporation metallochaperone hypa K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PYTT_0848 hypb: hydrogenase accessory protein hypb K04652 hypB; hydrogenase nickel incorporation protein HypB
D PYTT_0795 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2248 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0523 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1433 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0004 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0908 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0909 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1475 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0035 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_2455 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_1090 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PYTT_0564 cyclophilin type peptidyl-prolyl cis-trans isomerase/cld K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PYTT_0138 cyclophilin type peptidyl-prolyl cis-trans isomerase/cld K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PYTT_2538 ppic-type ppiase domain K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PYTT_1418 fkbp-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PYTT_0113 fkbp-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PYTT_0114 fkbp-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PYTT_0116 fkbp-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PYTT_0115 fkbp-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PYTT_2087 peptidyl-prolyl cis-trans isomerase ppic-type K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PYTT_1478 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:agl04131]
D PYTT_1470 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PYTT_2251 band 7 domain K07192 FLOT; flotillin
D PYTT_0257 gapdh-i: glyceraldehyde-3-phosphate dehydrogenase type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PYTT_1937 phosphoglycerate/bisphosphoglycerate mutase active site K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 04121 Ubiquitin system
C 03051 Proteasome [BR:agl03051]
C 03032 DNA replication proteins [BR:agl03032]
D PYTT_2270 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_2374 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_0735 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_0001 trp repressor/replication initiator K02313 dnaA; chromosomal replication initiator protein
D PYTT_1465 dnab: replicative dna helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PYTT_2328 zinc finger chc2-type K02316 dnaG; DNA primase [EC:2.7.7.101]
D PYTT_0729 ssb: single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein
D PYTT_1859 polc: dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PYTT_1078 dnan: dna polymerase iii beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PYTT_1210 hola: dna polymerase iii delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PYTT_0021 dna polymerase iii delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PYTT_0519 exonuclease rnase t/dna polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PYTT_1316 dnax nterm: dna polymerase iii subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PYTT_0912 ribonuclease hii K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PYTT_0734 rnhc: ribonuclease hiii K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D PYTT_0599 pola: dna polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PYTT_2131 zinc-finger nad-dependent dna ligase c4-type K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PYTT_2403 s-adenosyl-l-methionine-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PYTT_1431 gyra: dna gyrase a subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PYTT_1430 gyrb: dna gyrase b subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PYTT_0572 dna gyrase/topoisomerase iv subunit a K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PYTT_0804 dna topoisomerase type iia K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PYTT_0910 topb: dna topoisomerase iii K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:agl03036]
D PYTT_0061 rnaseiii: ribonuclease iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PYTT_2251 band 7 domain K07192 FLOT; flotillin
D PYTT_2270 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_2374 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_0735 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_0001 trp repressor/replication initiator K02313 dnaA; chromosomal replication initiator protein
D PYTT_1309 ftsa: cell division protein ftsa K03590 ftsA; cell division protein FtsA
D PYTT_1410 septum formation initiator K13052 divIC; cell division protein DivIC
D PYTT_0520 4tm region of dna translocase ftsk/spoiiie K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PYTT_0946 cell cycle protein K03588 ftsW; cell division protein FtsW
D PYTT_1308 cell division protein ftsz signature K03531 ftsZ; cell division protein FtsZ
D PYTT_1643 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1374 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1091 n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_2005 rnd mfp: efflux transporter rnd family mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PYTT_1580 mreb/mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PYTT_1976 p-loop containing nucleoside triphosphate hydrolase K03496 parA; chromosome partitioning protein
D PYTT_1523 aaa domain K03496 parA; chromosome partitioning protein
D PYTT_2161 parb/sulfiredoxin K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PYTT_0572 dna gyrase/topoisomerase iv subunit a K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PYTT_0804 dna topoisomerase type iia K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PYTT_1211 glucose inhibited division protein a K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PYTT_1651 phage integrase family K03733 xerC; integrase/recombinase XerC
D PYTT_2011 phage integrase family K04763 xerD; integrase/recombinase XerD
D PYTT_1423 nubpl iron-transfer p-loop ntpase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PYTT_1630 fido domain K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:agl03400]
D PYTT_2550 ogt: methylated-dna--[protein]-cysteine s-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PYTT_1978 uracil-dna glycosylase-like K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D PYTT_0486 dna glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PYTT_1835 dna glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PYTT_2121 hypoxandnaglyco: dna-deoxyinosine glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D PYTT_0379 uracil-dna glycosylase-like K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PYTT_2242 dna glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PYTT_0826 endonuclease/exonuclease/phosphatase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PYTT_2549 ap endonuclease 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PYTT_0646 recj: single-stranded-dna-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PYTT_2131 zinc-finger nad-dependent dna ligase c4-type K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PYTT_0599 pola: dna polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PYTT_2464 abc transporter K03701 uvrA; excinuclease ABC subunit A
D PYTT_0013 abc transporters family signature. K03701 uvrA; excinuclease ABC subunit A
D PYTT_0467 ultra-violet resistance protein b K03702 uvrB; excinuclease ABC subunit B
D PYTT_2466 uvrb/uvrc motif K03703 uvrC; excinuclease ABC subunit C
D PYTT_1674 p-loop containing nucleoside triphosphate hydrolase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PYTT_0957 p-loop containing nucleoside triphosphate hydrolase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PYTT_0455 rpob: dna-directed rna polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PYTT_0454 rpoc tigr: dna-directed rna polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PYTT_0424 rna polymerase alpha dna-directed subunit chain nucleotidyltransferase transferase transcription transcriptase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PYTT_1468 rna polymerase subunit omega/k/rpb6 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PYTT_2070 mfd: transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PYTT_1615 muts1: dna mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS
D PYTT_2477 mutl: dna mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL
D PYTT_0939 xsea: exodeoxyribonuclease vii large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PYTT_0418 exonuclease vii small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PYTT_1859 polc: dna polymerase iii alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PYTT_1078 dnan: dna polymerase iii beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PYTT_1210 hola: dna polymerase iii delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PYTT_0021 dna polymerase iii delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PYTT_0519 exonuclease rnase t/dna polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PYTT_1316 dnax nterm: dna polymerase iii subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PYTT_0729 ssb: single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein
D PYTT_2403 s-adenosyl-l-methionine-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PYTT_1111 tigrfam reca: protein reca K03553 recA; recombination protein RecA
D PYTT_1881 ruva: holliday junction dna helicase ruva K03550 ruvA; holliday junction DNA helicase RuvA
D PYTT_2126 ruvb: holliday junction dna helicase ruvb K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PYTT_2099 ruvc: crossover junction endodeoxyribonuclease ruvc K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PYTT_1975 pria: primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PYTT_2343 recf: dna replication and repair protein recf K03629 recF; DNA replication and repair protein RecF
D PYTT_1679 dead/deah box helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PYTT_0421 nucleic acid-binding ob-fold K03584 recO; DNA repair protein RecO (recombination protein O)
D PYTT_1588 recombination protein recr c4-type zinc finger K06187 recR; recombination protein RecR
D PYTT_1077 recn: dna repair protein recn K03631 recN; DNA repair protein RecN (Recombination protein N)
D PYTT_2186 restriction endonuclease type ii-like K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PYTT_2185 pd-(d/e)xk nuclease superfamily K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PYTT_2360 cas1 dvulg: crispr-associated endonuclease cas1 subtype i-c/dvulg K15342 cas1; CRISP-associated protein Cas1
D PYTT_1544 cas1 nmeni: crispr-associated endonuclease cas1 subtype ii/nmeni K15342 cas1; CRISP-associated protein Cas1
D PYTT_1431 gyra: dna gyrase a subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PYTT_1430 gyrb: dna gyrase b subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PYTT_2270 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_2374 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_0735 prokaryotic integration host factor signature K03530 hupB; DNA-binding protein HU-beta
D PYTT_1152 dead/deah box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PYTT_1275 dead/deah box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PYTT_1572 impb/mucb/samb family K03502 umuC; DNA polymerase V
D PYTT_1571 peptidase s24/s26a/s26b/s26c K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PYTT_1348 dead/deah box helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PYTT_2117 nrdj z: ribonucleoside-diphosphate reductase adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PYTT_1073 dhh family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:agl03029]
D PYTT_2277 if-2: translation initiation factor if-2 K02519 infB; translation initiation factor IF-2
D PYTT_2312 infc: translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D PYTT_1530 tsf: translation elongation factor ts K02357 tsf; elongation factor Ts
D PYTT_0463 ef-tu: translation elongation factor tu K02358 tuf; elongation factor Tu
D PYTT_0897 ef-g: translation elongation factor g K02355 fusA; elongation factor G
D PYTT_0907 tyrs: tyrosine--trna ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PYTT_0718 leus bact: leucine--trna ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PYTT_1768 asps bact: aspartate--trna ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PYTT_0723 glys dimeric: glycine--trna ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PYTT_1220 args: arginine--trna ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PYTT_0617 gata: aspartyl/glutamyl-trna(asn/gln) amidotransferase a subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PYTT_2141 gatb: aspartyl/glutamyl-trna(asn/gln) amidotransferase b subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PYTT_0616 gatc: aspartyl/glutamyl-trna(asn/gln) amidotransferase c subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PYTT_0729 ssb: single-stranded dna-binding protein K03111 ssb; single-strand DNA-binding protein
D PYTT_0070 om yaet: outer membrane protein assembly complex yaet protein K07277 SAM50; outer membrane protein insertion porin family
D PYTT_0692 prok dnak: chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D PYTT_1577 grpe K03687 GRPE; molecular chaperone GrpE
D PYTT_0694 groel: chaperonin grol K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PYTT_0693 groes chaperonin family K04078 groES; chaperonin GroES
D PYTT_1576 dnaj bact: chaperone protein dnaj K03686 dnaJ; molecular chaperone DnaJ
D PYTT_0330 pyridoxal phosphate-dependent transferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PYTT_1423 nubpl iron-transfer p-loop ntpase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PYTT_2071 60kd inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:agl02000]
D PYTT_0586 abc transporter transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PYTT_0587 abc transporter transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PYTT_1618 nmt1-like family K15553 ssuA; sulfonate transport system substrate-binding protein
D PYTT_1620 binding-protein-dependent transport system inner membrane component K15554 ssuC; sulfonate transport system permease protein
D PYTT_1619 abc transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PYTT_0875 bacterial extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PYTT_0874 binding-protein-dependent transport system inner membrane component K02011 afuB; iron(III) transport system permease protein
D PYTT_0873 abc transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PYTT_0639 uncharacterised protein family (upf0014) K02069 STAR2; UDP-glucose/iron transport system permease protein
D PYTT_0638 abc transporter K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D PYTT_0840 3a0107s03: phosphate abc transporter phosphate-binding protein psts K02040 pstS; phosphate transport system substrate-binding protein
D PYTT_0839 phosphate pstc: phosphate abc transporter permease protein pstc K02037 pstC; phosphate transport system permease protein
D PYTT_0838 3a0107s02c: phosphate abc transporter permease protein psta K02038 pstA; phosphate transport system permease protein
D PYTT_0837 abc transporter K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PYTT_0438 bacterial extracellular solute-binding proteins family 5 middle K15580 oppA; oligopeptide transport system substrate-binding protein
D PYTT_0437 binding-protein-dependent transport system inner membrane component K15581 oppB; oligopeptide transport system permease protein
D PYTT_0436 binding-protein-dependent transport system inner membrane component K15582 oppC; oligopeptide transport system permease protein
D PYTT_1944 abc transporter K15583 oppD; oligopeptide transport system ATP-binding protein
D PYTT_2089 abc transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PYTT_2088 abc transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PYTT_1156 abc transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PYTT_1113 bacterial extracellular solute-binding proteins family 5 middle K13893 yejA; microcin C transport system substrate-binding protein
D PYTT_2090 bacterial extracellular solute-binding proteins family 5 middle K13893 yejA; microcin C transport system substrate-binding protein
D PYTT_2092 binding-protein-dependent transport system inner membrane component K13894 yejB; microcin C transport system permease protein
D PYTT_2091 binding-protein-dependent transport system inner membrane component K13895 yejE; microcin C transport system permease protein
D PYTT_1541 abc transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PYTT_2456 abc transporter btuc-like K19976 mntB; manganese transport system permease protein
D PYTT_2457 abc transporter K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PYTT_1119 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D PYTT_1118 cobalt uptake substrate-specific transmembrane region K02007 cbiM; cobalt/nickel transport system permease protein
D PYTT_1120 abc transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PYTT_2459 zinc-uptake complex component a periplasmic K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PYTT_0263 predicted permease yjgp/yjgq family K07091 lptF; lipopolysaccharide export system permease protein
D PYTT_0152 predicted permease yjgp/yjgq family K11720 lptG; lipopolysaccharide export system permease protein
D PYTT_1013 abc transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PYTT_1855 abc-2 family transporter protein K25151 gldF; gliding motility-associated transport system permease protein
D PYTT_1854 abc transporter K25152 gldA; gliding motility-associated transport system ATP-binding protein
D PYTT_1856 abc-type uncharacterized transport system K25153 gldG; gliding motility-associatede transport system auxiliary component
D PYTT_0178 abc-2 family transporter protein K25180 ybhR; drug efflux transport system permease protein
D PYTT_0177 abc-2 family transporter protein K25181 ybhS; drug efflux transport system permease protein
D PYTT_0176 abc transporter K25182 ybhF; drug efflux transport system ATP-binding protein
D PYTT_0175 hlyd family secretion protein K25183 ybhG; membrane fusion protein YbhG
D PYTT_1130 ftsx-like permease family K09808 lolC_E; lipoprotein-releasing system permease protein
D PYTT_0499 abc transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PYTT_0024 abc transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PYTT_0592 ftsx-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein
D PYTT_1950 ftsx-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein
D PYTT_1949 ftsx-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein
D PYTT_0593 abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PYTT_1951 abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PYTT_2556 abc transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PYTT_0906 sbf-like cpa transporter family (duf4137) K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PYTT_0478 sodium:sulfate symporter transmembrane region K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PYTT_0563 mate K26939 norM; MATE family, multidrug efflux pump
D PYTT_0533 mate K26939 norM; MATE family, multidrug efflux pump
D PYTT_0054 mate K26937 dinF; MATE family, multidrug efflux pump
D PYTT_1503 mate K26937 dinF; MATE family, multidrug efflux pump
D PYTT_1266 sugar (and other) transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D PYTT_0472 fucp: l-fucose:h+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PYTT_1121 major facilitator superfamily K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PYTT_2504 major facilitator superfamily K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PYTT_0352 major facilitator superfamily K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PYTT_1713 major facilitator superfamily K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D PYTT_1989 pts i fam: phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PYTT_1988 phosphocarrier protein hpr-like K02784 ptsH; phosphocarrier protein HPr
D PYTT_2506 ion channel K10716 kch; voltage-gated potassium channel
D PYTT_2524 ion transport protein K10716 kch; voltage-gated potassium channel
D PYTT_2488 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D PYTT_0774 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D PYTT_0775 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D PYTT_2045 mscl: large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D PYTT_2254 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D PYTT_2467 mota/tolq/exbb proton channel family K03561 exbB; biopolymer transport protein ExbB
D PYTT_2151 mota/tolq/exbb proton channel family K03561 exbB; biopolymer transport protein ExbB
D PYTT_0727 mota/tolq/exbb proton channel family K03561 exbB; biopolymer transport protein ExbB
D PYTT_1834 mota/tolq/exbb proton channel family K03561 exbB; biopolymer transport protein ExbB
D PYTT_2468 biopolymer transport protein exbd/tolr K03559 exbD; biopolymer transport protein ExbD
D PYTT_0726 biopolymer transport protein exbd/tolr K03559 exbD; biopolymer transport protein ExbD
D PYTT_1832 biopolymer transport protein exbd/tolr K03559 exbD; biopolymer transport protein ExbD
D PYTT_1833 biopolymer transport protein exbd/tolr K03559 exbD; biopolymer transport protein ExbD
D PYTT_0937 cora-like mg2+ transporter protein K03284 corA; magnesium transporter
D PYTT_0626 crcb-like protein camphor resistance (crcb) K06199 crcB; fluoride exporter
D PYTT_1717 fad-binding type 2 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PYTT_0341 carbohydrate-selective porin oprb family K16080 mnoP; high affinity Mn2+ porin
D PYTT_0841 phosphate-selective porin o and p K07221 oprO_P; phosphate-selective porin OprO and OprP
D PYTT_1221 phosphate-selective porin o and p K07221 oprO_P; phosphate-selective porin OprO and OprP
D PYTT_0958 outer membrane protein bacterial K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PYTT_0413 pectin lyase fold/virulence factor K19231 bmaC; fibronectin-binding autotransporter adhesin
D PYTT_1351 pectin lyase fold/virulence factor K19231 bmaC; fibronectin-binding autotransporter adhesin
D PYTT_1115 tonb-dependent receptor beta-barrel K16092 btuB; vitamin B12 transporter
D PYTT_1960 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_2007 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_0629 Hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D PYTT_1551 carbohydrate-selective porin oprb family K07267 oprB; porin
D PYTT_0070 om yaet: outer membrane protein assembly complex yaet protein K07277 SAM50; outer membrane protein insertion porin family
D PYTT_2325 amino acid permease K20265 gadC; glutamate:GABA antiporter
D PYTT_1804 zip zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D PYTT_0667 2a0602: rnd transporter hydrophobe/amphiphile efflux-1 (hae1) family K18095 mexY; multidrug efflux pump
D PYTT_1177 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D PYTT_0083 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PYTT_1267 sodium/hydrogen exchanger family K11105 cvrA; potassium/hydrogen antiporter
D PYTT_0746 sodium/hydrogen exchanger family K26735 KEA4_5_6; K+:H+ antiporter
D PYTT_0246 cation transport protein K03498 trkH; trk/ktr system potassium uptake protein
D PYTT_0245 trka potassium uptake protein signature K03499 trkA; trk/ktr system potassium uptake protein
D PYTT_2567 chloride channel core K03281 clcA; chloride channel protein, CIC family
D PYTT_1726 sulfate permease family K03321 TC.SULP; sulfate permease, SulP family
D PYTT_1936 sulfate permease family K03321 TC.SULP; sulfate permease, SulP family
D PYTT_0089 murj mvin: murein biosynthesis integral membrane protein murj K03980 murJ; putative peptidoglycan lipid II flippase
D PYTT_1512 membrane transport protein K24180 mleP; malate permease and related proteins
D PYTT_1727 lyse type translocator K05835 rhtC; threonine efflux protein
D PYTT_0051 marc family integral membrane protein K05595 marC; multiple antibiotic resistance protein
D PYTT_0946 cell cycle protein K03588 ftsW; cell division protein FtsW
D PYTT_2482 putative manganese efflux pump K23242 mntP; manganese efflux pump family protein
D PYTT_0610 na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PYTT_0609 single hybrid motif K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PYTT_1139 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D PYTT_1958 hlyd membrane-fusion protein of t1ss K03543 emrA; membrane fusion protein, multidrug efflux system
D PYTT_1452 Hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D PYTT_2280 rnd mfp: efflux transporter rnd family mfp subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D PYTT_0666 rnd mfp: efflux transporter rnd family mfp subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D PYTT_2005 rnd mfp: efflux transporter rnd family mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PYTT_0631 chain length determinant protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PYTT_0343 transcriptional repressor c-terminal K04758 feoA; ferrous iron transport protein A
D PYTT_2570 transcriptional repressor c-terminal K04758 feoA; ferrous iron transport protein A
D PYTT_0342 feob: ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B
D PYTT_2569 feob: ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:agl02044]
D PYTT_0789 bacterial type ii and iii secretion system protein K02453 gspD; general secretion pathway protein D
D PYTT_1774 bacterial type ii and iii secretion system protein K02453 gspD; general secretion pathway protein D
D PYTT_0268 bacterial general secretion pathway protein g signature K02456 gspG; general secretion pathway protein G
D PYTT_2287 type iv leader peptidase family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PYTT_0265 type ii/iv secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D PYTT_0266 type ii/iv secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D PYTT_0267 type ii secretion system (t2ss) protein f K02653 pilC; type IV pilus assembly protein PilC
D PYTT_0524 pilt fam: twitching motility protein K02669 pilT; twitching motility protein PilT
D PYTT_0525 pilt fam: twitching motility protein K02669 pilT; twitching motility protein PilT
D PYTT_2247 cytidine deaminase-like K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PYTT_0709 competence protein K02238 comEC; competence protein ComEC
D PYTT_0297 seca: preprotein translocase seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PYTT_1202 bacterial translocase secf protein signature K12257 secDF; SecD/SecF fusion protein
D PYTT_1406 secg: preprotein translocase secg subunit K03075 secG; preprotein translocase subunit SecG
D PYTT_0924 secy subunit domain K03076 secY; preprotein translocase subunit SecY
D PYTT_0495 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PYTT_0382 ftsy: signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D PYTT_0222 preprotein translocase yajc K03210 yajC; preprotein translocase subunit YajC
D PYTT_2071 60kd inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PYTT_2368 tatae: twin arginine-targeting protein translocase tata/e family K03116 tatA; sec-independent protein translocase protein TatA
D PYTT_1903 sec-independent protein translocase protein (tatc) K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:agl02042]
D PYTT_1717 fad-binding type 2 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PYTT_0357 beta-n-acetylglucosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:agl02022]
D PYTT_0829 pas domain K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PYTT_0835 transcriptional regulatory protein c terminal K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PYTT_2057 osmosensitive k+ channel his kinase sensor domain K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PYTT_2058 transcriptional regulatory protein c terminal K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
C 02035 Bacterial motility proteins [BR:agl02035]
D PYTT_0524 pilt fam: twitching motility protein K02669 pilT; twitching motility protein PilT
D PYTT_0525 pilt fam: twitching motility protein K02669 pilT; twitching motility protein PilT
D PYTT_0265 type ii/iv secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D PYTT_0266 type ii/iv secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D PYTT_0267 type ii secretion system (t2ss) protein f K02653 pilC; type IV pilus assembly protein PilC
D PYTT_2287 type iv leader peptidase family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:agl04812]
D PYTT_1580 mreb/mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PYTT_1308 cell division protein ftsz signature K03531 ftsZ; cell division protein FtsZ
D PYTT_1309 ftsa: cell division protein ftsa K03590 ftsA; cell division protein FtsA
D PYTT_1976 p-loop containing nucleoside triphosphate hydrolase K03496 parA; chromosome partitioning protein
D PYTT_1523 aaa domain K03496 parA; chromosome partitioning protein
D PYTT_2161 parb/sulfiredoxin K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:agl04147]
D PYTT_1409 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PYTT_0257 gapdh-i: glyceraldehyde-3-phosphate dehydrogenase type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PYTT_0258 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PYTT_1466 alkyl hydroperoxide reductase subunit c/thiol specific antioxidant K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PYTT_2251 band 7 domain K07192 FLOT; flotillin
D PYTT_0694 groel: chaperonin grol K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PYTT_0692 prok dnak: chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D PYTT_1204 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PYTT_1507 aldolase-type tim barrel K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PYTT_0463 ef-tu: translation elongation factor tu K02358 tuf; elongation factor Tu
D PYTT_2291 histidine triad (hit) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PYTT_0906 sbf-like cpa transporter family (duf4137) K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PYTT_1052 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PYTT_0923 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PYTT_2258 argh: argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PYTT_0429 argg: argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PYTT_0226 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1171 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0334 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1227 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0866 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_0098 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1994 alpha-l-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PYTT_1419 gal kin: galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PYTT_2283 immunoglobulin e-set K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PYTT_0047 glutamine synthetase glycine-rich site K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PYTT_2024 aldolase-type tim barrel K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PYTT_0215 alpha-n-acetylglucosaminidase (naglu) tim-barrel domain K01205 NAGLU; alpha-N-acetylglucosaminidase [EC:3.2.1.50]
D PYTT_0242 alpha-n-acetylglucosaminidase (naglu) tim-barrel domain K01205 NAGLU; alpha-N-acetylglucosaminidase [EC:3.2.1.50]
D PYTT_2452 alpha-n-acetylglucosaminidase (naglu) tim-barrel domain K01205 NAGLU; alpha-N-acetylglucosaminidase [EC:3.2.1.50]
D PYTT_1086 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PYTT_1873 d-isomer specific 2-hydroxyacid dehydrogenases signature 2. K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PYTT_0337 purh: phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PYTT_2317 lipoamide dh: dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PYTT_0358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PYTT_1937 phosphoglycerate/bisphosphoglycerate mutase active site K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PYTT_2484 calycin K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:agl02048]
D PYTT_2360 cas1 dvulg: crispr-associated endonuclease cas1 subtype i-c/dvulg K15342 cas1; CRISP-associated protein Cas1
D PYTT_1544 cas1 nmeni: crispr-associated endonuclease cas1 subtype ii/nmeni K15342 cas1; CRISP-associated protein Cas1
D PYTT_2361 cas2: crispr-associated endonuclease cas2 K09951 cas2; CRISPR-associated protein Cas2
D PYTT_1545 cas2: crispr-associated endonuclease cas2 K09951 cas2; CRISPR-associated protein Cas2
D PYTT_2355 dead/deah box helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PYTT_2359 cas4: crispr-associated protein cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PYTT_2357 cas csd1: crispr-associated protein cas8c/csd1 subtype i-c/dvulg K19117 csd1; CRISPR-associated protein Csd1
D PYTT_2358 cas csd2: crispr-associated protein cas7/csd2 subtype i-c/dvulg K19118 csd2; CRISPR-associated protein Csd2
D PYTT_2356 crispr pre-crrna endoribonuclease cas5d K19119 cas5d; CRISPR-associated protein Cas5d
D PYTT_2403 s-adenosyl-l-methionine-dependent methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PYTT_2233 s-adenosyl-l-methionine-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PYTT_1307 d12 class n6 adenine-specific dna methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PYTT_2069 hnh endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PYTT_2239 toxin yoeb K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D PYTT_2240 antitoxin phd yefm type ii toxin-antitoxin system K19159 yefM; antitoxin YefM
D PYTT_1308 cell division protein ftsz signature K03531 ftsZ; cell division protein FtsZ
D PYTT_1580 mreb/mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PYTT_0572 dna gyrase/topoisomerase iv subunit a K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PYTT_0804 dna topoisomerase type iia K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PYTT_0330 pyridoxal phosphate-dependent transferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:agl01504]
D PYTT_1814 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PYTT_1668 beta-lactamase class a signature K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PYTT_2005 rnd mfp: efflux transporter rnd family mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PYTT_1960 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_2007 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D PYTT_0665 tetr bacterial regulatory protein hth signature K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D PYTT_0666 rnd mfp: efflux transporter rnd family mfp subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D PYTT_0667 2a0602: rnd transporter hydrophobe/amphiphile efflux-1 (hae1) family K18095 mexY; multidrug efflux pump
D PYTT_2280 rnd mfp: efflux transporter rnd family mfp subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:agl00536]
D PYTT_0357 beta-n-acetylglucosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:agl00537]
D PYTT_1086 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PYTT_0357 beta-n-acetylglucosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:agl03100]
D PYTT_0668 PYTT_0668 K14218 tRNA-Ala; tRNA Ala
D PYTT_2188 PYTT_2188 K14218 tRNA-Ala; tRNA Ala
D PYTT_0755 PYTT_0755 K14218 tRNA-Ala; tRNA Ala
D PYTT_0992 PYTT_0992 K14218 tRNA-Ala; tRNA Ala
D PYTT_2064 PYTT_2064 K14218 tRNA-Ala; tRNA Ala
D PYTT_0493 PYTT_0493 K14219 tRNA-Arg; tRNA Arg
D PYTT_1597 PYTT_1597 K14219 tRNA-Arg; tRNA Arg
D PYTT_1930 PYTT_1930 K14219 tRNA-Arg; tRNA Arg
D PYTT_0229 PYTT_0229 K14219 tRNA-Arg; tRNA Arg
D PYTT_1783 PYTT_1783 K14220 tRNA-Asn; tRNA Asn
D PYTT_1891 PYTT_1891 K14221 tRNA-Asp; tRNA Asp
D PYTT_2244 PYTT_2244 K14222 tRNA-Cys; tRNA Cys
D PYTT_1756 PYTT_1756 K14224 tRNA-Glu; tRNA Glu
D PYTT_0635 PYTT_0635 K14225 tRNA-Gly; tRNA Gly
D PYTT_2078 PYTT_2078 K14225 tRNA-Gly; tRNA Gly
D PYTT_2079 PYTT_2079 K14225 tRNA-Gly; tRNA Gly
D PYTT_0634 PYTT_0634 K14225 tRNA-Gly; tRNA Gly
D PYTT_0366 PYTT_0366 K14226 tRNA-His; tRNA His
D PYTT_0754 PYTT_0754 K14227 tRNA-Ile; tRNA Ile
D PYTT_0991 PYTT_0991 K14227 tRNA-Ile; tRNA Ile
D PYTT_2065 PYTT_2065 K14227 tRNA-Ile; tRNA Ile
D PYTT_1849 PYTT_1849 K14228 tRNA-Leu; tRNA Leu
D PYTT_1306 PYTT_1306 K14228 tRNA-Leu; tRNA Leu
D PYTT_1684 PYTT_1684 K14228 tRNA-Leu; tRNA Leu
D PYTT_0556 PYTT_0556 K14229 tRNA-Lys; tRNA Lys
D PYTT_0557 PYTT_0557 K14229 tRNA-Lys; tRNA Lys
D PYTT_1961 PYTT_1961 K14229 tRNA-Lys; tRNA Lys
D PYTT_0211 PYTT_0211 K14230 tRNA-Met; tRNA Met
D PYTT_0411 PYTT_0411 K14230 tRNA-Met; tRNA Met
D PYTT_2306 PYTT_2306 K14230 tRNA-Met; tRNA Met
D PYTT_1063 PYTT_1063 K14231 tRNA-Phe; tRNA Phe
D PYTT_1062 PYTT_1062 K14232 tRNA-Pro; tRNA Pro
D PYTT_1318 PYTT_1318 K14232 tRNA-Pro; tRNA Pro
D PYTT_0414 PYTT_0414 K14232 tRNA-Pro; tRNA Pro
D PYTT_2003 PYTT_2003 K14233 tRNA-Ser; tRNA Ser
D PYTT_2426 PYTT_2426 K14233 tRNA-Ser; tRNA Ser
D PYTT_2424 PYTT_2424 K14233 tRNA-Ser; tRNA Ser
D PYTT_2530 PYTT_2530 K14234 tRNA-Thr; tRNA Thr
D PYTT_0558 PYTT_0558 K14234 tRNA-Thr; tRNA Thr
D PYTT_0464 PYTT_0464 K14234 tRNA-Thr; tRNA Thr
D PYTT_0462 PYTT_0462 K14235 tRNA-Trp; tRNA Trp
D PYTT_1781 PYTT_1781 K14236 tRNA-Tyr; tRNA Tyr
D PYTT_0814 PYTT_0814 K14237 tRNA-Val; tRNA Val
D PYTT_1631 PYTT_1631 K14237 tRNA-Val; tRNA Val
D PYTT_1476 PYTT_1476 K14237 tRNA-Val; tRNA Val
D PYTT_0756 PYTT_0756 K01977 16SrRNA; 16S ribosomal RNA
D PYTT_0753 PYTT_0753 K01980 23SrRNA; 23S ribosomal RNA
D PYTT_0752 PYTT_0752 K01985 5SrRNA; 5S ribosomal RNA
D PYTT_1931 PYTT_1931 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PYTT_0477 nadp-dependent oxidoreductase domain K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PYTT_1126 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D PYTT_0822 dehydrogenase e1 component K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D PYTT_0823 thiamin diphosphate-binding fold K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D PYTT_2014 saccharopine dehydrogenase c-terminal domain K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D PYTT_1206 peptide methionine sulphoxide reductase msra K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D PYTT_0392 di-haem cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PYTT_1790 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PYTT_1048 ferritin-like domain K02217 ftnA; ferritin [EC:1.16.3.2]
D PYTT_1667 thioredoxin-like fold K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PYTT_1137 low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PYTT_1444 nrdg2: anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PYTT_1242 maltose/galactoside acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PYTT_2157 maltose/galactoside acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PYTT_1509 maltose/galactoside acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PYTT_1765 lnt: apolipoprotein n-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PYTT_2055 air carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D PYTT_1780 lgt: prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PYTT_2329 apbe family K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PYTT_1815 tigr00159: tigr00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PYTT_2231 atp-grasp fold subdomain 1 K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D PYTT_1987 hpr-ser: hpr(ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PYTT_2106 phosphagen kinase active site signature. K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D PYTT_2485 carbohydrate esterase sialic acid-specific acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D PYTT_2118 macro domain K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PYTT_2561 hotdog domain K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PYTT_0227 7tm receptor with intracellular hd hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D PYTT_1268 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PYTT_0014 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PYTT_1680 n-acetylmuramoyl-l-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_1402 n-acetylmuramoyl-l-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PYTT_0725 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PYTT_0264 glycoside hydrolase/deacetylase beta/alpha-barrel K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PYTT_0771 atpase family associated with various cellular activities (aaa) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PYTT_0117 atpase family associated with various cellular activities (aaa) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PYTT_0197 alpha/beta hydrolase fold K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D PYTT_2156 atp-dependent (s)-nad(p)h-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PYTT_0964 lyase catalytic K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D PYTT_2054 asparagine synthase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D PYTT_2053 protein of unknown function duf111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D PYTT_1911 kelch-type beta propeller K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D PYTT_2311 rbsd / fucu transport protein family K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D PYTT_1241 mpl: udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PYTT_0781 h+-transporting atpase (proton pump) signature K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PYTT_0782 atpase-ib2 cd: cadmium-translocating p-type atpase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PYTT_1763 4fe-4s single cluster domain of ferredoxin i K05337 fer; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PYTT_1747 plp-binding barrel K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PYTT_0933 glycosyltransferase family 25 (lps biosynthesis protein) K07270 K07270; glycosyl transferase, family 25
D PYTT_1081 glycosyltransferase family 25 (lps biosynthesis protein) K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D PYTT_0295 doxx K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D PYTT_0601 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D PYTT_2107 uvrb/uvrc motif K19411 mcsA; protein arginine kinase activator
D PYTT_2575 tig: trigger factor K03545 tig; trigger factor
D PYTT_1467 small protein b K03664 smpB; SsrA-binding protein
D PYTT_0851 hypc hupf: hydrogenase assembly chaperone hypc/hupf K04653 hypC; hydrogenase expression/formation protein HypC
D PYTT_0852 hypd: hydrogenase expression/formation protein hypd K04654 hypD; hydrogenase expression/formation protein HypD
D PYTT_0855 hype: hydrogenase expression/formation protein hype K04655 hypE; hydrogenase expression/formation protein HypE
D PYTT_0850 zinc finger hypf-type K04656 hypF; hydrogenase maturation protein HypF
D PYTT_1083 magnesium chelatase subunit chli K07391 comM; magnesium chelatase family protein
D PYTT_0074 osmc/ohr family K07397 yhfA; putative redox protein
D PYTT_2158 clpp/crotonase-like domain K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D PYTT_2155 radc: dna repair protein radc K03630 radC; DNA repair protein RadC
D PYTT_2086 rmuc family K09760 rmuC; DNA recombination protein RmuC
D PYTT_0448 dpra: dna protecting protein dpra K04096 smf; DNA processing protein
D PYTT_2213 terminase small subunit K07474 xtmA; phage terminase small subunit
D PYTT_2082 atpase aaa-type core K07478 ycaJ; putative ATPase
D PYTT_1096 isxo2-like transposase domain K07488 K07488; transposase
D PYTT_2341 transposase is200-like K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D PYTT_1315 nucleoid-associated protein ybab/ebfc family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PYTT_2537 proton-dependent oligopeptide transporter family K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PYTT_2449 major facilitator superfamily K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PYTT_1420 sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PYTT_0314 sss: transporter solute:sodium symporter (sss) family K03307 TC.SSS; solute:Na+ symporter, SSS family
D PYTT_0921 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PYTT_1563 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PYTT_2023 sodium bile acid symporter family K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PYTT_1445 predicted permease membrane region K07085 K07085; putative transport protein
C 99978 Cell growth
D PYTT_0504 r3h domain K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D PYTT_0588 elongation factor g c-terminus K06207 typA; GTP-binding protein
C 99992 Structural proteins
D PYTT_0691 Hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D PYTT_0161 Hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D PYTT_1247 chaperone protein skp K06142 hlpA; outer membrane protein
D PYTT_0594 barrel-sandwich domain of cusb or hlyd membrane-fusion K02005 ABC.CD.TX; HlyD family secretion protein
D PYTT_1822 domain of unknown function duf20 K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D PYTT_0836 phou full: phosphate transport system regulatory protein phou K02039 phoU; phosphate transport system protein
D PYTT_0842 phou domain K02039 phoU; phosphate transport system protein
D PYTT_0813 apag domain K06195 apaG; ApaG protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PYTT_0274 rnase p subunit p30 K04477 ycdX; putative hydrolase
D PYTT_2557 sufb: fes assembly protein sufb K09014 sufB; Fe-S cluster assembly protein SufB
D PYTT_2558 uncharacterized protein family (upf0051) K09015 sufD; Fe-S cluster assembly protein SufD
D PYTT_0713 fe-s metabolism associated domain K02426 sufE; cysteine desulfuration protein SufE
D PYTT_2012 lema family K03744 lemA; LemA protein
D PYTT_1715 lema family K03744 lemA; LemA protein
D PYTT_0407 duf218 domain K03748 sanA; SanA protein
D PYTT_0163 protein of unknown function duf417 K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D PYTT_2450 ankyrin repeats (many copies) K06867 K06867; uncharacterized protein
D PYTT_0298 aldolase-type tim barrel K06871 K06871; uncharacterized protein
D PYTT_0345 alpha/beta hydrolase fold K06889 K06889; uncharacterized protein
D PYTT_0355 alpha/beta hydrolase fold K06889 K06889; uncharacterized protein
D PYTT_1901 inhibitor of apoptosis-promoting bax1 K06890 K06890; uncharacterized protein
D PYTT_1297 gene 25-like lysozyme K06903 W; Bacteriophage baseplate protein W
D PYTT_1290 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D PYTT_0669 kh domain K06960 K06960; uncharacterized protein
D PYTT_1844 putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D PYTT_2483 acyl-coa n-acyltransferase K06975 K06975; uncharacterized protein
D PYTT_1511 pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D PYTT_0333 yfch: tigr01777 family protein K07071 K07071; uncharacterized protein
D PYTT_1138 predicted permease K07089 K07089; uncharacterized protein
D PYTT_2116 phosphodiesterase mj0936/vps29 K07095 K07095; uncharacterized protein
D PYTT_1278 metallo-dependent phosphatase-like K07098 K07098; uncharacterized protein
D PYTT_2182 metallo-dependent phosphatase-like K07098 K07098; uncharacterized protein
D PYTT_0961 metallo-dependent phosphatase-like K07098 K07098; uncharacterized protein
D PYTT_2542 short chain dehydrogenase K07124 K07124; uncharacterized protein
D PYTT_1471 tetratricopeptide-like helical domain K07126 K07126; uncharacterized protein
D PYTT_0253 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_2084 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0678 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0331 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_2134 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_1616 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_1617 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_2564 peptidase s54 rhomboid domain K07126 K07126; uncharacterized protein
D PYTT_2565 peptidase s54 rhomboid domain K07126 K07126; uncharacterized protein
D PYTT_1702 tetratricopeptide-like helical domain K07126 K07126; uncharacterized protein
D PYTT_1703 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0441 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0496 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0508 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0511 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0512 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0513 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0514 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_0016 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_1039 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_1966 sel1 repeat K07126 K07126; uncharacterized protein
D PYTT_1147 pyridine nucleotide disulphide reductase class-i signature K07137 K07137; uncharacterized protein
D PYTT_0219 protein of unknown function (duf1624) K07148 K07148; uncharacterized protein
D PYTT_0351 protein of unknown function (duf418) K07148 K07148; uncharacterized protein
D PYTT_1638 protein of unknown function (duf418) K07148 K07148; uncharacterized protein
D PYTT_2546 protein of unknown function (duf418) K07148 K07148; uncharacterized protein
D PYTT_0569 protein of unknown function (duf418) K07148 K07148; uncharacterized protein
D PYTT_1249 Hypothetical protein K07149 K07149; uncharacterized protein
D PYTT_1913 Hypothetical protein K07164 K07164; uncharacterized protein
D PYTT_2072 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D PYTT_0645 aspartyl/glutamyl-trna amidotransferase subunit b-related K09117 K09117; uncharacterized protein
D PYTT_1677 protein of unknown function duf167 K09131 K09131; uncharacterized protein
D PYTT_2009 putative member of dmt superfamily (duf486) K09922 K09922; uncharacterized protein
D PYTT_2133 uncharacterized protein conserved in bacteria (duf2062) K09928 K09928; uncharacterized protein
D PYTT_0396 putative quorum-sensing-regulated virulence factor K09954 K09954; uncharacterized protein
D PYTT_1899 beta-l-arabinofuranosidase gh127 K09955 K09955; uncharacterized protein
D PYTT_2080 yijf periplasmic ecs4873 precursor cc1379 signal domain pm0035 K09974 K09974; uncharacterized protein
D PYTT_0446 mitochondrial fission elm1 K07276 K07276; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024