+E Replication protein KO
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DNA Replication Proteins - Agrobacterium tumefaciens H13-3
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D AGROH133_06092 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AGROH133_04439 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D AGROH133_05610 hupA; histone-like protein K03530 hupB; DNA-binding protein HU-beta
D AGROH133_14652 DNA binding protein K03530 hupB; DNA-binding protein HU-beta
D AGROH133_05414 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AGROH133_03505 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AGROH133_03487 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D AGROH133_05178 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AGROH133_07596 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AGROH133_14127 replication protein C K18996 repC; replication initiation protein RepC
D AGROH133_12481 putative replication protein C K18996 repC; replication initiation protein RepC
D AGROH133_06149 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E AGROH133_05713 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E AGROH133_03437 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E AGROH133_05246 holC; putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E AGROH133_09161 holA; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E AGROH133_06114 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E AGROH133_10453 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E AGROH133_02806 dnaQ; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E AGROH133_07381 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E AGROH133_02946 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E AGROH133_06092 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E AGROH133_04439 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E AGROH133_04318 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E AGROH133_02965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E AGROH133_07396 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E AGROH133_06092 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E AGROH133_04439 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E AGROH133_04318 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C AGROH133_06135 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C AGROH133_02818 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C AGROH133_05350 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C AGROH133_06448 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C AGROH133_05739 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C AGROH133_12787 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022