+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Anthonomus grandis grandis (boll weevil)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        126743548 mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        126744220 mRNA-capping enzyme	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        126747257 cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        126745002 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        126745962 uncharacterized protein LOC126745962	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        126741269 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        126746008 nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        126749428 nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        126739914 cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        126737283 cleavage and polyadenylation specificity factor subunit 6	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        126735026 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        126747283 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        126735195 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        126735487 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        126747254 cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        126745581 pre-mRNA 3' end processing protein WDR33 isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        126744004 WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        126744559 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        126747269 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        126743842 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        126745909 cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        126747598 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        126750323 protein suppressor of forked	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        126743784 symplekin	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        126735162 small nuclear ribonucleoprotein-associated protein B	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        126745017 small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        126739922 probable small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        126745669 small nuclear ribonucleoprotein F-like	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        126748680 small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        126747402 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        126738397 U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        126741718 U7 snRNA-associated Sm-like protein LSm11 isoform X1	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        126735195 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        126735487 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        126747598 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        126743784 symplekin	K06100 SYMPK; symplekin 
D      DRB sensitivity inducing factor (DSIF) complex
E        126745545 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        126746357 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        126750631 transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        126733798 N6-adenosine-methyltransferase subunit METTL3 isoform X1	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        126746780 N6-adenosine-methyltransferase non-catalytic subunit	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        126735577 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        126737098 pre-mRNA-splicing regulator female-lethal(2)D	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        126742853 RNA-binding protein spenito isoform X1	K13190 RBM15; RNA-binding protein 15 
D      Poly(A) addition factors
E        126735005 poly(A) polymerase type 3 isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        126733684 poly(A) RNA polymerase gld-2 homolog A-like	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        126740445 TAR DNA-binding protein 43 isoform X1	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      126747650 DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      126739522 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      126743090 terminal nucleotidyltransferase 5C isoform X1	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      126739368 serrate RNA effector molecule homolog isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        126735525 RNA-binding protein 8A	K12876 RBM8A; RNA-binding protein 8A 
E        126747607 protein mago nashi	K12877 MAGOH; protein mago nashi 
E        126746536 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        126748007 ATP-dependent RNA helicase WM6	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        126743106 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        126739262 coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        126736294 protein CASC3-like isoform X1	K14323 CASC3; protein CASC3 
E        126741116 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        126739822 pinin	K13114 PNN; pinin 
D      TREX complex
E        126737309 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        126744511 THO complex subunit 2	K12879 THOC2; THO complex subunit 2 
E        126739882 THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        126746536 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        126740629 THO complex subunit 5 homolog isoform X1	K13174 THOC5; THO complex subunit 5 
E        126744029 THO complex subunit 6	K13175 THOC6; THO complex subunit 6 
E        126743387 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        126733720 PCI domain-containing protein 2 homolog	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        126743962 enhancer of yellow 2 transcription factor-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
D      Nuclear pore complex
E        126744949 nucleoprotein TPR isoform X1	K09291 TPR; nucleoprotein TPR 
E        126744655 protein Rae1	K14298 RAE1; mRNA export factor 
E        126738272 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        126739789 nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        126736983 nuclear pore complex protein Nup85	K14304 NUP85; nuclear pore complex protein Nup85 
E        126742039 nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        126738801 nuclear pore complex protein Nup50	K14295 NUP50; nuclear pore complex protein Nup50 
E        126743044 nucleoporin p54 isoform X1	K14308 NUP54; nuclear pore complex protein Nup54 
E        126735925 nuclear pore glycoprotein p62	K14306 NUP62; nuclear pore complex protein Nup62 
E        126740205 nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        126740605 nuclear pore complex protein Nup93-like	K14309 NUP93; nuclear pore complex protein Nup93 
E        126745147 nuclear pore complex protein Nup98-Nup96 isoform X1	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        126733683 nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        126748751 nuclear pore complex protein Nup133	K14300 NUP133; nuclear pore complex protein Nup133 
E        126748628 nucleoporin Nup188	K14311 NUP188; nuclear pore complex protein Nup188 
E        126733575 nuclear pore complex protein Nup155	K14312 NUP155; nuclear pore complex protein Nup155 
E        126733862 nuclear pore complex protein Nup160 homolog	K14303 NUP160; nuclear pore complex protein Nup160 
E        126743551 nucleoporin Nup35	K14313 NUP35; nuclear pore complex protein Nup53 
E        126748590 LOW QUALITY PROTEIN: nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        126750122 nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        126747350 nucleoporin NUP42-like	K14321 NUPL2; nucleoporin-like protein 2 
E        126733943 nucleoporin NDC1	K14315 NDC1; nucleoporin NDC1 
E        126743138 LOW QUALITY PROTEIN: nucleoporin SEH1-A	K14299 SEH1; nucleoporin SEH1 
E        126745728 aladin-like	K14320 AAAS; aladin 
E        126734924 mRNA export factor Gle1	K18723 GLE1; nucleoporin GLE1 
E        126737528 nuclear RNA export factor 1-like isoform X1	K14284 NXF; nuclear RNA export factor 
E        126737891 nuclear RNA export factor 2-like	K14284 NXF; nuclear RNA export factor 
E        126745222 NTF2-related export protein	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        126741966 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        126747903 acidic leucine-rich nuclear phosphoprotein 32 family member A	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        126748310 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        126737961 FAS-associated factor 2	K18726 FAF2; FAS-associated factor 2 
E        126749539 transitional endoplasmic reticulum ATPase TER94	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        126748870 protein N-lysine methyltransferase METTL21D-like	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        126742375 transportin-2-like	K18727 TNPO2; transportin-2 
E        126741918 exportin-1	K14290 XPO1; exportin-1 
E        126734584 exportin-7 isoform X1	K18460 XPO7; exportin-7 
E        126735720 ran GTPase-activating protein 1-like	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        126734070 eukaryotic translation initiation factor 4E type 2-like	K03259 EIF4E; translation initiation factor 4E 
E        126743791 eukaryotic initiation factor 4A-I	K03257 EIF4A; translation initiation factor 4A 
E        126741224 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        126736097 eukaryotic translation initiation factor 4B	K03258 EIF4B; translation initiation factor 4B 
E        126740809 eukaryotic translation initiation factor 4H-like	K24086 EIF4H; translation initiation factor 4H 
E        126746857 eukaryotic translation initiation factor 4E-binding protein	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        126739212 protein angel homolog 2 isoform X1	K18729 ANGEL; protein angel 
E        126734567 RNA-binding protein FXR1	K15516 FMR; fragile X mental retardation protein 
E        126748887 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        126734685 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        126749051 cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        126745357 ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        126749037 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        126733892 polyadenylate-binding protein 4-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        126739515 polyadenylate-binding protein-interacting protein 1	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        126748415 polyadenylate-binding protein-interacting protein 2B	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        126736107 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        126747296 deformed epidermal autoregulatory factor 1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        126744464 malignant T-cell-amplified sequence 1 homolog	K07575 MCTS; malignant T-cell-amplified sequence 
E        126737044 density-regulated protein homolog	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        126746699 partner of Y14 and mago	K14294 WIBG; partner of Y14 and mago 
E        126740996 heterogeneous nuclear ribonucleoprotein 27C isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        126742520 RNA-binding protein Musashi homolog Rbp6 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        126743443 RNA-binding protein Musashi homolog 2 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        126750730 protein HBS1 isoform X3	K14416 HBS1; elongation factor 1 alpha-like protein 
E        126746315 protein pelota	K06965 PELO; protein pelota 
E        126743121 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        126744871 DEAD-box helicase Dbp80	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        126743716 pre-mRNA-splicing factor syf1 homolog isoform X1	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        126745729 SAP domain-containing ribonucleoprotein	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        126741525 regulator of chromosome condensation isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        126742950 la-related protein 6	K18733 LARP6; la-related protein 6 
E        126745339 transcriptional activator protein Pur-beta isoform X1	K21772 PURA; transcriptional activator protein Pur-alpha 
C    Surveillance factors
D      Surveillance complex
E        126747972 LOW QUALITY PROTEIN: eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        126737488 eukaryotic peptide chain release factor GTP-binding subunit ERF3A	K03267 ERF3; peptide chain release factor subunit 3 
E        126734344 regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        126747498 regulator of nonsense transcripts 2 isoform X1	K14327 UPF2; regulator of nonsense transcripts 2 
D      Protein phosphatase 2A
E        126737567 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        126746323 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        126748876 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit-like isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        126746491 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        126745983 uncharacterized protein LOC126745983 isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        126736642 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        126736662 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        126734468 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        126733649 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        126745469 nonsense-mediated mRNA decay factor SMG8	K18734 SMG8; protein SMG8 
E        126737455 nonsense-mediated mRNA decay factor SMG9	K18735 SMG9; protein SMG9 
E        126740252 probable ATP-dependent RNA helicase DHX34 isoform X1	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        126746255 GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        126738299 protein penguin	K14844 PUF6; pumilio homology domain family member 6 
E        126743383 unconventional myosin-Va	K10357 MYO5; myosin V 
E        126734805 protein bicaudal D	K18739 BICD; protein bicaudal D 
D      Factors that have mRNA localization signals
E        126734776 actin, cytoplasmic 2-like	K05692 ACTB_G1; actin beta/gamma 1 
E        126734801 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        126734809 actin-5C	K05692 ACTB_G1; actin beta/gamma 1 
E        126740784 actin, acrosomal process isoform-like	K05692 ACTB_G1; actin beta/gamma 1 
E        126746294 protein hairy-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        126737333 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        126737418 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        126737444 enhancer of split m7 protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        126741930 enhancer of split mgamma protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
D      Trans-acting binding proteins
E        126743079 far upstream element-binding protein 2-like isoform X1	K13210 FUBP; far upstream element-binding protein 
E        126744261 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        126749144 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        126735966 elongation factor 1-gamma isoform X1	K03233 EEF1G; elongation factor 1-gamma 
E        126744181 arf-GAP domain and FG repeat-containing protein 1 isoform X1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        126748397 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        126742423 polypyrimidine tract-binding protein 2 isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        126743327 RNA-binding protein squid isoform X1	K03102 SQD; squid 
E        126741199 RNA-binding protein squid-like	K03102 SQD; squid 
E        126734685 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        126749051 cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        126734567 RNA-binding protein FXR1	K15516 FMR; fragile X mental retardation protein 
E        126748887 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        126737308 poly(rC)-binding protein 3 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        126748432 CUGBP Elav-like family member 2 isoform X1	K02177 BRU; bruno 
E        126743000 maternal protein exuperantia	K18745 EXU; maternal protein exuperantia 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        126740218 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        126737497 protein argonaute-2-like isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        126749443 protein argonaute-2 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        126734070 eukaryotic translation initiation factor 4E type 2-like	K03259 EIF4E; translation initiation factor 4E 
E        126734344 regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        126745357 ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        126738622 ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        126748514 RNA-binding protein MEX3B	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        126742155 LIM domain-containing protein jub isoform X1	K16682 AJUBA; LIM domain-containing protein 
E        126740540 putative helicase mov-10-B.1 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        126736723 proline-rich nuclear receptor coactivator 2-like	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        126748404 transportin-1 isoform X1	K18752 TNPO1; transportin-1 
E        126746626 huntingtin-like	K04533 HD; huntingtin 
E        126749565 huntingtin-like	K04533 HD; huntingtin 
E        126734537 cAMP-dependent protein kinase catalytic subunit beta-like	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        126747848 cAMP-dependent protein kinase catalytic subunit alpha-like	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        126748005 cAMP-dependent protein kinase catalytic subunit 1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        126741533 cAMP-dependent protein kinase catalytic subunit alpha-like isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        126748606 la-related protein 1B	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        126735540 m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        126737239 mRNA-decapping enzyme 1A isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        126735993 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        126737227 U6 snRNA-associated Sm-like protein LSm2 isoform X1	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        126737494 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        126743766 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        126735021 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        126736480 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        126737425 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        126749161 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        126744540 kinesin light chain isoform X1	K10407 KLC; kinesin light chain 
E        126743383 unconventional myosin-Va	K10357 MYO5; myosin V 
E        126734487 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        126745034 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        126736433 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        126736845 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        126748420 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        126740979 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        126743039 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        126734685 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        126749051 cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        126747431 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        126736186 CCR4-NOT transcription complex subunit 2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        126739556 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        126739006 CCR4-NOT transcription complex subunit 6 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        126737890 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        126737524 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        126747644 PAN2-PAN3 deadenylation complex subunit pan3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        126748098 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        126739912 protein BTG4-like	K14443 TOB; protein Tob/BTG 
E        126743208 enhancer of mRNA-decapping protein 3 isoform X1	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        126735069 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        126747498 regulator of nonsense transcripts 2 isoform X1	K14327 UPF2; regulator of nonsense transcripts 2 
E        126743902 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        126743800 YTH domain-containing family protein 3-like isoform X1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        126736571 nucleolysin TIAR	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        126748959 cytotoxic granule associated RNA binding protein TIA1 isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        126749037 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        126733892 polyadenylate-binding protein 4-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        126748397 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        126734567 RNA-binding protein FXR1	K15516 FMR; fragile X mental retardation protein 
E        126747997 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        126736588 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        126743791 eukaryotic initiation factor 4A-I	K03257 EIF4A; translation initiation factor 4A 
E        126743106 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        126736097 eukaryotic translation initiation factor 4B	K03258 EIF4B; translation initiation factor 4B 
E        126741224 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        126748695 ribosomal protein S6 kinase 2 beta	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        126735051 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        126737528 nuclear RNA export factor 1-like isoform X1	K14284 NXF; nuclear RNA export factor 
E        126737891 nuclear RNA export factor 2-like	K14284 NXF; nuclear RNA export factor 
E        126749226 histone deacetylase 6 isoform X1	K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        126737239 mRNA-decapping enzyme 1A isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        126735540 m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        126738622 ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        126743208 enhancer of mRNA-decapping protein 3 isoform X1	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        126735069 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
D      Lsm complex
E        126735993 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        126737227 U6 snRNA-associated Sm-like protein LSm2 isoform X1	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        126737494 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        126743766 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        126735021 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        126736480 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        126737425 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        126749161 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        126740218 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        126742719 5'-3' exoribonuclease 2 homolog	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        126747304 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
C    3'-5' decay
D      Core exosome factors
E        126747977 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        126734354 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        126746791 exosome complex component RRP40	K03681 RRP40; exosome complex component RRP40 
E        126746814 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        126735161 exosome complex component RRP46	K12590 RRP46; exosome complex component RRP46 
E        126740370 exosome complex component MTR3	K12587 MTR3; exosome complex component MTR3 
E        126747259 exosome complex component RRP42 isoform X1	K12589 RRP42; exosome complex component RRP42 
E        126738336 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        126741247 exosome complex component RRP45	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        126734384 exosome complex exonuclease RRP44	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        126745865 exosome component 10-like isoform X1	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        126749439 exosome component 10-like	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        126745209 nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        126745163 M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        126735980 terminal nucleotidyltransferase 4B-like isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        126741884 exosome RNA helicase MTR4	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        126736107 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        126734031 tetratricopeptide repeat protein 37 isoform X1	K12600 SKI3; superkiller protein 3 
E        126750608 WD repeat-containing protein 61	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        126739006 CCR4-NOT transcription complex subunit 6 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        126747431 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        126736186 CCR4-NOT transcription complex subunit 2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        126739556 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        126737890 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        126745248 CCR4-NOT transcription complex subunit 9 isoform X1	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        126735318 CCR4-NOT transcription complex subunit 10 isoform X1	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        126737524 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        126747644 PAN2-PAN3 deadenylation complex subunit pan3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        126735624 poly(A)-specific ribonuclease PARN-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        126742288 pre-piRNA 3'-exonuclease trimmer-like isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        126740469 ATP-dependent DNA/RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        126748098 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        126739912 protein BTG4-like	K14443 TOB; protein Tob/BTG 
E        126739490 nocturnin isoform X1	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        126747304 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        126745246 2',5'-phosphodiesterase 12 isoform X1	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        126733786 nuclear exosome regulator NRDE2	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        126741318 protein Smaug homolog 1	K27396 SMG; protein Smaug 
E        126736254 uncharacterized protein LOC126736254	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        126737120 endoribonuclease ZC3H12A-like isoform X1	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        126736320 ribonuclease 3 isoform X1	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        126748408 oligoribonuclease isoform X1	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        126741150 enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        126733710 enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        126739365 polyribonucleotide nucleotidyltransferase 1, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        126734422 ATP-dependent 6-phosphofructokinase isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        126740994 heat shock 70 kDa protein cognate 5	K04043 dnaK; molecular chaperone DnaK 
E        126745812 heat shock protein 60A	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        126734354 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        126747977 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        126746814 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        126747259 exosome complex component RRP42 isoform X1	K12589 RRP42; exosome complex component RRP42 
D      Others
!
#<hr>
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#Last updated: April 25, 2024