+D GENES KO
#
KEGG Orthology (KO) - Agrococcus sp. Marseille-Q4369
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:agro00010]
D JSQ78_10175 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSQ78_02495 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSQ78_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSQ78_05370 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSQ78_05380 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSQ78_02465 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSQ78_02455 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_04145 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_07445 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D JSQ78_02460 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JSQ78_06305 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSQ78_12610 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSQ78_02340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSQ78_01690 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSQ78_01795 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_12200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSQ78_06425 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_01740 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D JSQ78_05130 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:agro00020]
D JSQ78_13615 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JSQ78_01905 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JSQ78_06610 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JSQ78_00765 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_06625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSQ78_06630 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSQ78_12070 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSQ78_12065 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSQ78_12080 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSQ78_12075 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSQ78_05425 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSQ78_11815 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JSQ78_03895 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JSQ78_05130 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JSQ78_01690 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSQ78_01795 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:agro00030]
D JSQ78_02495 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSQ78_02490 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSQ78_09195 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSQ78_04010 NAD(P)-dependent oxidoreductase K19243 azf; NAD+ dependent glucose-6-phosphate dehydrogenase [EC:1.1.1.388]
D JSQ78_02480 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D JSQ78_09005 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSQ78_12485 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSQ78_02270 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JSQ78_02505 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JSQ78_02500 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JSQ78_03680 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JSQ78_07455 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D JSQ78_11920 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D JSQ78_04620 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JSQ78_08535 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JSQ78_08805 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_12450 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JSQ78_12535 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D JSQ78_05380 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSQ78_05370 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSQ78_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:agro00040]
D JSQ78_12255 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSQ78_05835 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSQ78_08470 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D JSQ78_02270 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JSQ78_08515 rhaI; L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D JSQ78_08525 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
C 00051 Fructose and mannose metabolism [PATH:agro00051]
D JSQ78_12870 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JSQ78_12370 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JSQ78_12145 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSQ78_12405 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSQ78_12090 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JSQ78_08515 rhaI; L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D JSQ78_08525 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D JSQ78_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSQ78_05370 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSQ78_06925 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D JSQ78_11985 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D JSQ78_05380 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSQ78_02465 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSQ78_03680 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JSQ78_06930 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JSQ78_06935 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:agro00052]
D JSQ78_06425 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JSQ78_05855 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSQ78_05835 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_10175 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSQ78_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSQ78_11475 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:agro00053]
D JSQ78_12255 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSQ78_12140 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JSQ78_08470 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08180 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:agro00500]
D JSQ78_11475 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JSQ78_05835 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSQ78_03655 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JSQ78_02615 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JSQ78_01085 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JSQ78_01090 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JSQ78_06575 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D JSQ78_05825 phosphotransferase K16146 pep2; maltokinase [EC:2.7.1.175]
D JSQ78_02620 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D JSQ78_01095 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D JSQ78_07650 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D JSQ78_07645 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D JSQ78_07635 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D JSQ78_08800 glycoside hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_10175 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSQ78_02495 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSQ78_12870 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:agro00520]
D JSQ78_09640 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JSQ78_09635 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D JSQ78_12870 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JSQ78_06835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JSQ78_06855 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JSQ78_12445 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JSQ78_13185 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JSQ78_11540 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JSQ78_10175 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSQ78_01740 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_05835 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSQ78_12255 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSQ78_05855 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSQ78_02495 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSQ78_12370 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JSQ78_12145 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSQ78_12405 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSQ78_12090 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JSQ78_02615 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:agro00620]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSQ78_01690 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSQ78_01795 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_11775 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSQ78_11770 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSQ78_02340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSQ78_02425 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12165 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_13230 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_07975 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D JSQ78_12200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JSQ78_03895 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSQ78_11815 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JSQ78_05425 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JSQ78_05130 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JSQ78_00670 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_01520 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:agro00630]
D JSQ78_00675 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSQ78_00670 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSQ78_13615 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JSQ78_01905 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_02425 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12165 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12240 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JSQ78_11190 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JSQ78_08830 catalase K03781 katE; catalase [EC:1.11.1.6]
D JSQ78_06875 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JSQ78_01765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_01780 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_06490 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSQ78_13550 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JSQ78_13540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_13545 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JSQ78_08170 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D JSQ78_03940 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JSQ78_00765 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JSQ78_06530 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:agro00640]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSQ78_11775 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSQ78_11770 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSQ78_03330 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSQ78_08785 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSQ78_03325 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSQ78_08780 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSQ78_03320 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSQ78_08775 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_07615 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_02425 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12165 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_12240 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JSQ78_06630 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSQ78_06625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSQ78_01310 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_08245 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_05695 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D JSQ78_05690 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D JSQ78_12200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:agro00650]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_00220 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSQ78_09800 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_12070 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSQ78_12065 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSQ78_12080 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSQ78_12075 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_00620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_10460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_11955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_05335 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JSQ78_05330 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JSQ78_05345 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D JSQ78_05435 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_07720 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12925 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12930 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSQ78_07850 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D JSQ78_06680 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:agro00660]
D JSQ78_05435 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_07720 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12925 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12930 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSQ78_06630 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSQ78_06625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSQ78_13175 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JSQ78_13180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JSQ78_13000 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:agro00562]
D JSQ78_11465 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JSQ78_01310 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_08245 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_02465 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:agro00190]
D JSQ78_12625 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JSQ78_12070 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSQ78_12065 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSQ78_12080 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSQ78_12075 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSQ78_03010 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JSQ78_03015 ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D JSQ78_03005 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D JSQ78_02510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JSQ78_03710 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D JSQ78_03000 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JSQ78_03715 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JSQ78_03720 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JSQ78_02520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JSQ78_05920 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JSQ78_05925 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JSQ78_04885 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JSQ78_04875 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JSQ78_04880 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JSQ78_04890 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JSQ78_04870 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JSQ78_04905 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JSQ78_04895 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JSQ78_04900 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JSQ78_07555 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D JSQ78_06345 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:agro00710]
D JSQ78_02460 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JSQ78_02455 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_04145 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_07445 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D JSQ78_05380 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSQ78_05370 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSQ78_02505 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JSQ78_03680 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JSQ78_02465 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSQ78_02270 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JSQ78_02500 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:agro00720]
D JSQ78_03895 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSQ78_05425 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JSQ78_12070 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSQ78_12065 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSQ78_12080 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSQ78_12075 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSQ78_06625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSQ78_06630 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_06610 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JSQ78_01905 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JSQ78_06485 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JSQ78_11770 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSQ78_11775 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:agro00680]
D JSQ78_06490 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSQ78_12610 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSQ78_05380 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSQ78_05370 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSQ78_00610 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSQ78_11775 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSQ78_11770 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSQ78_06305 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSQ78_12970 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSQ78_06160 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JSQ78_02610 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JSQ78_05230 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D JSQ78_05225 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D JSQ78_05250 cofE; coenzyme F420-0:L-glutamate ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:agro00910]
D JSQ78_10805 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JSQ78_01765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_01780 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_02330 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JSQ78_02335 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JSQ78_08625 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:agro00920]
D JSQ78_07745 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D JSQ78_13595 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D JSQ78_04815 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D JSQ78_01960 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSQ78_08840 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSQ78_04935 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JSQ78_04930 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JSQ78_00795 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D JSQ78_02805 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSQ78_11705 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:agro00061]
D JSQ78_02425 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12165 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_01670 acyl carrier protein K02078 acpP; acyl carrier protein
D JSQ78_01680 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JSQ78_01675 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JSQ78_01665 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JSQ78_02600 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JSQ78_03885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_12900 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:agro00071]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_01935 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07835 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_07615 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSQ78_07830 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D JSQ78_09840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_12365 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_03885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_12900 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:agro00561]
D JSQ78_03940 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_02975 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D JSQ78_02970 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D JSQ78_05375 DAK2 domain-containing protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D JSQ78_02965 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D JSQ78_02985 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JSQ78_04250 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D JSQ78_03880 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JSQ78_13160 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:agro00564]
D JSQ78_13195 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JSQ78_06725 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JSQ78_03880 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JSQ78_00685 adenylyltransferase/cytidyltransferase family protein K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D JSQ78_13160 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JSQ78_02760 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JSQ78_06670 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JSQ78_01050 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JSQ78_04460 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JSQ78_11445 cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D JSQ78_13470 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:agro00592]
D JSQ78_07615 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSQ78_01935 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07835 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:agro01040]
D JSQ78_07615 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSQ78_01320 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:agro00230]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_12450 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JSQ78_10920 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JSQ78_10875 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JSQ78_06600 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JSQ78_10845 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JSQ78_10860 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JSQ78_10855 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSQ78_10940 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JSQ78_12260 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JSQ78_12265 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JSQ78_08820 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JSQ78_06595 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JSQ78_08450 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JSQ78_07415 cell wall-binding repeat-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D JSQ78_11990 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JSQ78_10700 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D JSQ78_12150 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JSQ78_07540 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JSQ78_06730 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSQ78_06750 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSQ78_03440 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JSQ78_00180 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JSQ78_03935 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSQ78_06710 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSQ78_00780 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D JSQ78_02235 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JSQ78_09580 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JSQ78_09575 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JSQ78_01565 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D JSQ78_02105 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JSQ78_02515 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JSQ78_10795 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JSQ78_12135 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D JSQ78_07005 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JSQ78_01015 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D JSQ78_08545 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D JSQ78_02040 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D JSQ78_08075 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
C 00240 Pyrimidine metabolism [PATH:agro00240]
D JSQ78_02225 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JSQ78_02220 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JSQ78_02205 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JSQ78_02210 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JSQ78_08065 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JSQ78_08090 nitronate monooxygenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JSQ78_08070 dihydroorotate oxidase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D JSQ78_03740 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D JSQ78_10660 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JSQ78_02230 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JSQ78_01040 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JSQ78_03440 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JSQ78_12195 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JSQ78_04215 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JSQ78_04170 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JSQ78_04650 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JSQ78_07415 cell wall-binding repeat-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D JSQ78_11990 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JSQ78_10700 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D JSQ78_08115 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D JSQ78_11240 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JSQ78_02200 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JSQ78_12120 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JSQ78_09875 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D JSQ78_09580 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JSQ78_09575 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JSQ78_11895 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JSQ78_01890 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JSQ78_12125 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D JSQ78_11825 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JSQ78_04515 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:agro00250]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_12865 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSQ78_04775 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JSQ78_10465 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JSQ78_04560 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JSQ78_10755 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JSQ78_04285 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JSQ78_10795 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JSQ78_08820 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JSQ78_02205 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_00620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_10460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_11955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_02330 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JSQ78_02335 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JSQ78_10805 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JSQ78_06505 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSQ78_08665 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSQ78_01765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_01780 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_02225 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JSQ78_02220 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JSQ78_09565 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_09570 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_10855 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSQ78_06835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JSQ78_10920 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:agro00260]
D JSQ78_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSQ78_11805 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JSQ78_04990 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JSQ78_04980 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JSQ78_04985 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JSQ78_10210 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JSQ78_06490 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSQ78_03940 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JSQ78_06305 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSQ78_12970 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSQ78_06160 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JSQ78_02610 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JSQ78_10930 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JSQ78_10935 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D JSQ78_13550 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JSQ78_13540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_13545 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JSQ78_09730 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D JSQ78_07735 solA; N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D JSQ78_11700 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JSQ78_10960 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JSQ78_12655 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JSQ78_02320 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JSQ78_02315 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JSQ78_09175 M24 family metallopeptidase K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
C 00270 Cysteine and methionine metabolism [PATH:agro00270]
D JSQ78_04935 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JSQ78_04930 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JSQ78_08630 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JSQ78_11700 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JSQ78_03135 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JSQ78_02250 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JSQ78_03965 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JSQ78_00340 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_10365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_12425 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JSQ78_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSQ78_11805 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JSQ78_04990 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JSQ78_00795 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D JSQ78_02805 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSQ78_11705 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSQ78_00800 bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JSQ78_03090 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JSQ78_13005 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_01960 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSQ78_08840 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSQ78_12200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JSQ78_13170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSQ78_10960 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JSQ78_12970 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSQ78_06160 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:agro00280]
D JSQ78_13005 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSQ78_13220 Glu/Leu/Phe/Val dehydrogenase family protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JSQ78_03330 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSQ78_08785 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSQ78_03325 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSQ78_08780 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSQ78_03320 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSQ78_08775 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_05670 acyl-CoA dehydrogenase family protein K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_01935 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07835 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_02425 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12165 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSQ78_12240 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JSQ78_01865 NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JSQ78_09030 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JSQ78_01310 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_08245 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_03310 ATP-grasp domain-containing protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D JSQ78_03315 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D JSQ78_05335 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JSQ78_05330 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:agro00290]
D JSQ78_12655 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JSQ78_13175 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JSQ78_13180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JSQ78_13000 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JSQ78_05435 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_07720 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12925 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12930 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSQ78_12935 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JSQ78_12920 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JSQ78_13005 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSQ78_13220 Glu/Leu/Phe/Val dehydrogenase family protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JSQ78_12865 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSQ78_01520 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:agro00300]
D JSQ78_04990 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JSQ78_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSQ78_11805 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JSQ78_04505 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSQ78_09675 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSQ78_04525 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JSQ78_13635 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JSQ78_00105 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D JSQ78_13640 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JSQ78_04415 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JSQ78_04995 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JSQ78_03830 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JSQ78_03825 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:agro00310]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_09840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_12365 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_00620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_10460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_11955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:agro00220]
D JSQ78_04290 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JSQ78_10755 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JSQ78_04285 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JSQ78_08565 N-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D JSQ78_09565 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_09570 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_10855 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSQ78_01765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_01780 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_02225 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JSQ78_02220 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JSQ78_10805 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_12865 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSQ78_07405 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D JSQ78_04300 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D JSQ78_04295 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JSQ78_04305 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JSQ78_05410 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D JSQ78_09170 M20 family metallopeptidase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:agro00330]
D JSQ78_03365 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D JSQ78_03355 FAD-dependent oxidoreductase K03343 puo; putrescine oxidase [EC:1.4.3.10]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_06570 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JSQ78_01410 speB; agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D JSQ78_11175 speB; agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D JSQ78_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_05175 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_08565 N-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D JSQ78_08560 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D JSQ78_11265 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JSQ78_06505 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSQ78_08665 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSQ78_10415 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D JSQ78_03400 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JSQ78_03395 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_09730 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00340 Histidine metabolism [PATH:agro00340]
D JSQ78_02280 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JSQ78_02275 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D JSQ78_02290 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D JSQ78_04375 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D JSQ78_04380 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JSQ78_02285 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JSQ78_04385 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JSQ78_04390 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_08790 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_00645 histidinol phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D JSQ78_03750 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JSQ78_07145 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JSQ78_07140 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JSQ78_07135 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JSQ78_07115 arginase family protein K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:agro00350]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_04390 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_08790 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_13085 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D JSQ78_13075 fumarylacetoacetate hydrolase family protein K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D JSQ78_13070 2-dehydro-3-deoxyglucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D JSQ78_00620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_10460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_11955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:agro00360]
D JSQ78_09780 paaF; phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D JSQ78_09770 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D JSQ78_09765 paaB; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D JSQ78_09760 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D JSQ78_09755 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D JSQ78_09750 paaK; phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D JSQ78_09795 paaZ; phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_00220 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSQ78_09800 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_04390 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_08790 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_05175 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_02535 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:agro00380]
D JSQ78_04580 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D JSQ78_04570 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_09840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_12365 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_05175 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_08830 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:agro00400]
D JSQ78_03875 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JSQ78_02175 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JSQ78_02180 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JSQ78_02170 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JSQ78_00655 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JSQ78_02165 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JSQ78_02295 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JSQ78_02995 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JSQ78_04375 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D JSQ78_02310 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JSQ78_02320 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JSQ78_02315 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JSQ78_10825 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D JSQ78_04175 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JSQ78_11115 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_04390 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_08790 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:agro00410]
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_05200 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_07485 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_07615 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSQ78_01310 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSQ78_08245 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:agro00430]
D JSQ78_04775 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JSQ78_10465 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JSQ78_05200 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D JSQ78_11770 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSQ78_11775 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:agro00450]
D JSQ78_02805 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSQ78_11705 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSQ78_08630 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JSQ78_03135 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JSQ78_03965 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JSQ78_06700 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JSQ78_08945 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JSQ78_13295 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JSQ78_05615 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:agro00460]
D JSQ78_03655 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JSQ78_06490 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:agro00470]
D JSQ78_06825 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K01775 alr; alanine racemase [EC:5.1.1.1]
D JSQ78_13200 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSQ78_09565 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_09570 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_10855 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSQ78_00170 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JSQ78_03815 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JSQ78_04415 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JSQ78_04995 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JSQ78_09730 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D JSQ78_01410 speB; agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D JSQ78_11175 speB; agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
C 00480 Glutathione metabolism [PATH:agro00480]
D JSQ78_00950 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D JSQ78_01805 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JSQ78_03690 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JSQ78_06610 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JSQ78_09005 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSQ78_12485 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSQ78_02490 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSQ78_09195 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSQ78_07840 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:agro00515]
D JSQ78_05625 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:agro00514]
D JSQ78_05625 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:agro00542]
D JSQ78_04915 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:agro00541]
D JSQ78_05835 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSQ78_05855 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSQ78_12255 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSQ78_12295 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSQ78_12410 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JSQ78_12415 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D JSQ78_12370 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JSQ78_12145 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSQ78_12405 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSQ78_12090 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JSQ78_12445 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:agro00550]
D JSQ78_13185 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JSQ78_11540 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JSQ78_03800 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JSQ78_03815 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JSQ78_03830 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JSQ78_13200 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSQ78_03825 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JSQ78_01530 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JSQ78_02695 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JSQ78_03820 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JSQ78_03805 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JSQ78_03835 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JSQ78_09130 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D JSQ78_02665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JSQ78_11040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:agro00552]
D JSQ78_02695 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JSQ78_04915 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JSQ78_07505 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:agro00543]
D JSQ78_04915 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JSQ78_04935 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JSQ78_00700 glycosyl transferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:agro00730]
D JSQ78_01100 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSQ78_01910 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JSQ78_05270 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D JSQ78_00650 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JSQ78_07005 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:agro00740]
D JSQ78_12010 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JSQ78_12020 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JSQ78_12005 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JSQ78_12015 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JSQ78_04625 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JSQ78_07745 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D JSQ78_13595 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:agro00750]
D JSQ78_04160 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JSQ78_06160 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JSQ78_04985 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JSQ78_02045 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D JSQ78_02050 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:agro00760]
D JSQ78_00125 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JSQ78_12150 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JSQ78_07415 cell wall-binding repeat-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D JSQ78_11990 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JSQ78_10700 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D JSQ78_03385 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JSQ78_00045 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D JSQ78_08770 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JSQ78_04455 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D JSQ78_11945 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D JSQ78_04225 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JSQ78_00620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_10460 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSQ78_11955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:agro00770]
D JSQ78_05435 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_07720 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12925 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSQ78_12930 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSQ78_12935 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JSQ78_12920 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JSQ78_01760 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JSQ78_04645 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JSQ78_07485 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JSQ78_06840 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D JSQ78_02245 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JSQ78_05255 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JSQ78_02410 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JSQ78_06830 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JSQ78_13005 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:agro00780]
D JSQ78_01665 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JSQ78_02600 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JSQ78_12245 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:agro00785]
D JSQ78_07700 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_01690 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSQ78_01795 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JSQ78_00765 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JSQ78_03330 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSQ78_08785 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSQ78_03325 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSQ78_08780 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSQ78_03320 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSQ78_08775 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSQ78_13550 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JSQ78_13540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSQ78_13545 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:agro00790]
D JSQ78_07525 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JSQ78_07515 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JSQ78_07520 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JSQ78_04510 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JSQ78_03450 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JSQ78_12010 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JSQ78_09115 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D JSQ78_01365 anthranilate synthase component I family protein K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D JSQ78_03480 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D JSQ78_01625 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
C 00670 One carbon pool by folate [PATH:agro00670]
D JSQ78_04510 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JSQ78_06485 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JSQ78_06490 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSQ78_06600 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JSQ78_06595 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JSQ78_02260 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JSQ78_13540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSQ78_04515 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JSQ78_06530 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JSQ78_05975 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:agro00860]
D JSQ78_13025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSQ78_09285 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D JSQ78_09360 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JSQ78_09355 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JSQ78_09325 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JSQ78_09305 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D JSQ78_09310 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D JSQ78_09320 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D JSQ78_02510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JSQ78_02520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:agro00130]
D JSQ78_11425 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JSQ78_11420 chorismate-binding protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D JSQ78_11400 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D JSQ78_11340 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D JSQ78_11380 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D JSQ78_11375 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D JSQ78_11385 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:agro00900]
D JSQ78_01910 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JSQ78_04760 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JSQ78_06275 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D JSQ78_05580 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JSQ78_04735 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JSQ78_05395 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_09430 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D JSQ78_09435 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JSQ78_03860 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JSQ78_05515 uppS; di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D JSQ78_01530 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:agro00907]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_01935 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07835 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JSQ78_02505 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics [PATH:agro01059]
D JSQ78_00590 Pyoverdin chromophore biosynthetic protein pvcC K21184 sgcC; two-component FAD-dependent monooxygenase [EC:1.14.14.15 1.14.14.-]
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:agro00523]
D JSQ78_12295 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSQ78_12410 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JSQ78_12415 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D JSQ78_11420 chorismate-binding protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D JSQ78_12410 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:agro00946]
D JSQ78_03655 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:agro00311]
D JSQ78_09730 FAD-dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D JSQ78_08390 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:agro00332]
D JSQ78_03400 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JSQ78_03395 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:agro00261]
D JSQ78_11800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSQ78_11805 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JSQ78_04505 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSQ78_09675 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSQ78_04525 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:agro00521]
D JSQ78_10175 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSQ78_11080 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSQ78_11465 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JSQ78_12295 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSQ78_12410 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JSQ78_12415 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JSQ78_10175 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:agro00525]
D JSQ78_12295 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSQ78_12410 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:agro00401]
D JSQ78_04175 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_04390 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_08790 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JSQ78_02295 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JSQ78_01680 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JSQ78_02600 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JSQ78_01670 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:agro00999]
D JSQ78_02250 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JSQ78_03655 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:agro00362]
D JSQ78_01935 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07835 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_03345 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JSQ78_08025 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D JSQ78_09840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_12365 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSQ78_00220 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSQ78_09800 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:agro00627]
D JSQ78_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_05175 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_13230 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JSQ78_13065 FAD-dependent monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:agro00364]
D JSQ78_09860 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:agro00625]
D JSQ78_00845 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_04615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JSQ78_08220 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:agro00361]
D JSQ78_09860 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JSQ78_03345 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:agro00623]
D JSQ78_13065 FAD-dependent monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D JSQ78_09860 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:agro00622]
D JSQ78_03345 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JSQ78_08025 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D JSQ78_01935 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSQ78_07835 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:agro00643]
D JSQ78_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_05175 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSQ78_03345 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D JSQ78_07810 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D JSQ78_08025 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:agro03020]
D JSQ78_07320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JSQ78_07315 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JSQ78_06895 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JSQ78_02240 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D JSQ78_06185 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:agro03010]
D JSQ78_02380 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JSQ78_01030 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JSQ78_07075 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JSQ78_02135 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JSQ78_07025 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JSQ78_08920 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JSQ78_07200 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JSQ78_07040 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JSQ78_06860 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JSQ78_07110 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JSQ78_06900 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JSQ78_07205 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JSQ78_06905 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JSQ78_08725 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JSQ78_04550 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JSQ78_00955 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JSQ78_07060 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JSQ78_08910 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JSQ78_07085 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JSQ78_01430 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JSQ78_11600 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JSQ78_07090 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JSQ78_07105 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JSQ78_07100 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JSQ78_07045 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JSQ78_07035 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JSQ78_11680 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JSQ78_08905 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JSQ78_11675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JSQ78_11595 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JSQ78_06865 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JSQ78_07055 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JSQ78_07015 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JSQ78_07070 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JSQ78_06890 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JSQ78_07030 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JSQ78_00980 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JSQ78_04350 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JSQ78_03415 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JSQ78_07080 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JSQ78_07095 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JSQ78_07050 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JSQ78_12545 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D JSQ78_03410 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JSQ78_08735 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JSQ78_07065 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JSQ78_07020 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JSQ78_02630 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JSQ78_00825 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JSQ78_08730 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JSQ78_08990 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JSQ78_04355 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JSQ78_06910 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:agro00970]
D JSQ78_13025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSQ78_01165 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JSQ78_01170 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JSQ78_01160 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JSQ78_02145 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JSQ78_01555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSQ78_02035 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JSQ78_11125 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JSQ78_06270 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JSQ78_05615 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JSQ78_02260 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JSQ78_03530 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JSQ78_01385 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSQ78_03455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JSQ78_07480 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JSQ78_05005 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSQ78_04695 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JSQ78_12605 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JSQ78_04320 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JSQ78_04315 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JSQ78_04280 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSQ78_12030 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:agro03060]
D JSQ78_07010 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSQ78_11585 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSQ78_02470 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSQ78_02095 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JSQ78_02100 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JSQ78_08975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSQ78_05530 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSQ78_00910 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JSQ78_00900 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSQ78_05570 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JSQ78_02735 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JSQ78_13660 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D JSQ78_02740 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JSQ78_00985 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JSQ78_03765 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSQ78_10035 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSQ78_13315 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:agro04122]
D JSQ78_01100 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSQ78_01960 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSQ78_08840 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSQ78_01115 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:agro03018]
D JSQ78_03425 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D JSQ78_12610 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSQ78_04545 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JSQ78_02555 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JSQ78_04845 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSQ78_11005 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSQ78_04975 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JSQ78_04500 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JSQ78_09930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSQ78_06205 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSQ78_06345 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JSQ78_08925 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:agro03030]
D JSQ78_02640 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_05290 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_03755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSQ78_11790 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSQ78_11900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSQ78_01400 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSQ78_09000 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSQ78_08900 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JSQ78_01570 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JSQ78_01285 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_08915 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_04740 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JSQ78_00990 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JSQ78_02365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSQ78_01135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:agro03410]
D JSQ78_05190 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JSQ78_04660 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JSQ78_05000 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JSQ78_00835 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSQ78_08880 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSQ78_03675 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSQ78_10730 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSQ78_00890 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JSQ78_03930 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JSQ78_10650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSQ78_12035 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSQ78_02365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSQ78_01135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:agro03420]
D JSQ78_12560 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JSQ78_02430 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JSQ78_13340 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JSQ78_02415 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JSQ78_02435 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JSQ78_00035 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_00050 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_06660 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_02365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSQ78_01135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSQ78_06185 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:agro03430]
D JSQ78_00035 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_00050 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_06660 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_05400 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JSQ78_05415 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JSQ78_01285 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_08915 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_03755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSQ78_09000 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSQ78_11790 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSQ78_01400 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSQ78_11900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSQ78_02640 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_05290 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_01135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:agro03440]
D JSQ78_01285 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_08915 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_09010 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JSQ78_01525 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JSQ78_11795 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JSQ78_04440 recA; recombinase RecA K03553 recA; recombination protein RecA
D JSQ78_02365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSQ78_02085 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JSQ78_02070 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JSQ78_05260 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JSQ78_03755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSQ78_09000 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSQ78_11790 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSQ78_01400 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSQ78_11900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSQ78_02640 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_05290 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_02255 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:agro03450]
D JSQ78_09850 Ku protein K10979 ku; DNA end-binding protein Ku
D JSQ78_09845 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:agro03250]
D JSQ78_09090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:agro02010]
D JSQ78_08095 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D JSQ78_05305 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JSQ78_05300 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D JSQ78_05295 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JSQ78_00135 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JSQ78_00140 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D JSQ78_00145 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D JSQ78_00150 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JSQ78_11480 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JSQ78_11485 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D JSQ78_03230 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSQ78_06255 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSQ78_11490 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JSQ78_09260 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D JSQ78_09265 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D JSQ78_09270 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D JSQ78_12095 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JSQ78_12100 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JSQ78_12110 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JSQ78_12115 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JSQ78_12105 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JSQ78_08485 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JSQ78_08490 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JSQ78_08500 autoinducer 2 ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D JSQ78_08495 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D JSQ78_03235 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JSQ78_03245 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JSQ78_03240 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JSQ78_06370 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JSQ78_06365 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JSQ78_06360 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JSQ78_06355 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JSQ78_04335 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D JSQ78_04330 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D JSQ78_04325 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D JSQ78_04340 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D JSQ78_01825 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSQ78_01830 ABC transporter permease subunit K10009 tcyB; L-cystine transport system permease protein
D JSQ78_01835 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JSQ78_06775 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JSQ78_06755 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JSQ78_06760 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JSQ78_06765 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JSQ78_06770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JSQ78_05475 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JSQ78_06405 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D JSQ78_10345 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JSQ78_05465 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSQ78_06410 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSQ78_10350 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSQ78_05470 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D JSQ78_06415 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D JSQ78_10355 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D JSQ78_06075 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_11635 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_13585 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_13565 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D JSQ78_13575 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D JSQ78_03565 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D JSQ78_03560 iron ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D JSQ78_03570 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D JSQ78_00185 zinc ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D JSQ78_00195 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JSQ78_00190 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JSQ78_02565 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JSQ78_01210 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JSQ78_12315 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D JSQ78_12320 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JSQ78_11975 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D JSQ78_11980 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D JSQ78_11970 ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D JSQ78_00600 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JSQ78_00595 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JSQ78_12180 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSQ78_12185 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSQ78_05895 ATP-binding cassette domain-containing protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
C 02060 Phosphotransferase system (PTS) [PATH:agro02060]
D JSQ78_12045 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JSQ78_06940 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D JSQ78_06930 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JSQ78_06935 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JSQ78_12140 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JSQ78_11985 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:agro03070]
D JSQ78_02095 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JSQ78_02100 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JSQ78_11585 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSQ78_02470 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSQ78_07010 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSQ78_08975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSQ78_05530 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSQ78_00900 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSQ78_00910 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JSQ78_02735 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JSQ78_13660 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D JSQ78_02740 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:agro02020]
D JSQ78_02395 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JSQ78_11735 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JSQ78_06295 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JSQ78_06290 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D JSQ78_06370 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JSQ78_04100 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JSQ78_04105 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JSQ78_04085 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D JSQ78_04090 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D JSQ78_04095 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D JSQ78_05700 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JSQ78_05705 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JSQ78_05710 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JSQ78_02520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JSQ78_00110 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D JSQ78_05550 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JSQ78_05555 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D JSQ78_08995 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JSQ78_00185 zinc ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D JSQ78_00190 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JSQ78_00195 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JSQ78_11040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSQ78_03300 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JSQ78_11025 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JSQ78_00245 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSQ78_11865 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSQ78_00250 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JSQ78_00255 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JSQ78_01765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_01780 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_10900 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_05055 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D JSQ78_09565 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_09570 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JSQ78_05920 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JSQ78_05925 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JSQ78_05850 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:agro02024]
D JSQ78_02295 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JSQ78_03875 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JSQ78_04105 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JSQ78_06775 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JSQ78_06755 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JSQ78_06760 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JSQ78_06765 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JSQ78_06770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JSQ78_03885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_12900 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_12020 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JSQ78_06230 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JSQ78_08125 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JSQ78_06075 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_11635 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_13585 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_03095 TIGR04028 family ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSQ78_11620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSQ78_13555 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSQ78_03100 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSQ78_11625 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSQ78_03105 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSQ78_11630 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSQ78_03110 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSQ78_08975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSQ78_11585 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSQ78_02470 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSQ78_07010 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSQ78_05530 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSQ78_00900 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSQ78_00910 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D JSQ78_11480 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:agro02040]
D JSQ78_01825 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSQ78_01820 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JSQ78_12610 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:agro01501]
D JSQ78_06075 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_11635 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_13585 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_05910 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D JSQ78_08390 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JSQ78_03835 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:agro01502]
D JSQ78_13200 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSQ78_06825 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K01775 alr; alanine racemase [EC:5.1.1.1]
D JSQ78_03825 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JSQ78_03820 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JSQ78_03805 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JSQ78_11040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D JSQ78_09090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:agro01000]
C 01001 Protein kinases [BR:agro01001]
D JSQ78_02880 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSQ78_03870 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSQ78_09120 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSQ78_09125 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSQ78_00750 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JSQ78_02395 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JSQ78_11735 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JSQ78_06295 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JSQ78_04100 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JSQ78_05550 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JSQ78_06195 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSQ78_11670 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSQ78_12705 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:agro01009]
D JSQ78_12425 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JSQ78_07280 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JSQ78_09140 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JSQ78_02610 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:agro01002]
D JSQ78_03765 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSQ78_10035 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSQ78_13315 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSQ78_05035 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSQ78_05480 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSQ78_03935 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSQ78_06710 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSQ78_06150 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JSQ78_10920 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JSQ78_02330 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JSQ78_06835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JSQ78_09595 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D JSQ78_09105 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JSQ78_10710 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JSQ78_07435 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JSQ78_03690 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JSQ78_03550 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D JSQ78_09390 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JSQ78_11040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSQ78_01805 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JSQ78_13640 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JSQ78_04590 M20/M25/M40 family metallo-hydrolase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D JSQ78_05430 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D JSQ78_08075 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JSQ78_01745 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JSQ78_07000 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JSQ78_13695 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JSQ78_07530 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JSQ78_05910 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D JSQ78_04555 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D JSQ78_00110 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D JSQ78_12750 trypsin-like serine protease K18546 sprC; streptogrisin C [EC:3.4.21.-]
D JSQ78_12770 hypothetical protein K18546 sprC; streptogrisin C [EC:3.4.21.-]
D JSQ78_05455 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D JSQ78_02665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JSQ78_03585 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JSQ78_03590 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JSQ78_00065 ATP-dependent serine peptidase containing a PDZ domain protein K07177 K07177; Lon-like protease
D JSQ78_04400 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JSQ78_00985 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:agro01003]
D JSQ78_12360 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D JSQ78_05625 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D JSQ78_12085 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D JSQ78_02620 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D JSQ78_04915 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JSQ78_00700 glycosyl transferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:agro01005]
D JSQ78_12300 glycosyltransferase K12991 rfbG; rhamnosyltransferase [EC:2.4.1.-]
D JSQ78_04915 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:agro01011]
D JSQ78_13185 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JSQ78_11540 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JSQ78_03800 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JSQ78_03815 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JSQ78_03830 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JSQ78_13200 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSQ78_06825 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K01775 alr; alanine racemase [EC:5.1.1.1]
D JSQ78_00170 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JSQ78_03820 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JSQ78_03805 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JSQ78_02695 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JSQ78_08935 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JSQ78_03835 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JSQ78_09130 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D JSQ78_02665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JSQ78_11040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSQ78_06150 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JSQ78_09105 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JSQ78_10710 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JSQ78_02155 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:agro01004]
D JSQ78_01680 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JSQ78_01675 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JSQ78_01665 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JSQ78_02600 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JSQ78_01320 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JSQ78_11860 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSQ78_03885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_12900 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_03880 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:agro01008]
D JSQ78_00590 Pyoverdin chromophore biosynthetic protein pvcC K21184 sgcC; two-component FAD-dependent monooxygenase [EC:1.14.14.15 1.14.14.-]
C 01006 Prenyltransferases [BR:agro01006]
D JSQ78_03860 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JSQ78_09435 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JSQ78_05515 uppS; di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D JSQ78_01530 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JSQ78_04420 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JSQ78_11385 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JSQ78_02510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:agro01007]
D JSQ78_07480 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JSQ78_13025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSQ78_04280 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSQ78_12030 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JSQ78_06270 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JSQ78_05005 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSQ78_05615 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JSQ78_03455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JSQ78_03530 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JSQ78_01385 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSQ78_12605 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JSQ78_01555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSQ78_11125 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JSQ78_04695 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JSQ78_02035 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JSQ78_02145 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JSQ78_04320 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JSQ78_04315 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JSQ78_11575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSQ78_12865 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSQ78_00105 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D JSQ78_04390 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_08790 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSQ78_10930 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JSQ78_08630 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JSQ78_08560 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D JSQ78_04770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSQ78_09360 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JSQ78_13005 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSQ78_06160 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:agro00199]
D JSQ78_10165 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:agro00194]
D JSQ78_04870 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JSQ78_04875 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JSQ78_04880 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JSQ78_04885 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JSQ78_04890 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JSQ78_04895 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JSQ78_04900 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JSQ78_04905 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:agro03000]
D JSQ78_00340 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_10365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_00890 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JSQ78_08505 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D JSQ78_08315 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JSQ78_07965 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JSQ78_13395 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D JSQ78_03205 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JSQ78_13140 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JSQ78_09945 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D JSQ78_08745 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JSQ78_08835 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D JSQ78_08085 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D JSQ78_10045 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D JSQ78_13320 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D JSQ78_00680 ImmA/IrrE family metallo-endopeptidase K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JSQ78_05125 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JSQ78_04450 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D JSQ78_06155 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D JSQ78_00200 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JSQ78_12245 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JSQ78_07430 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D JSQ78_09555 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D JSQ78_06985 hypothetical protein K07729 K07729; putative transcriptional regulator
D JSQ78_10620 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D JSQ78_06505 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSQ78_08665 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSQ78_12375 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JSQ78_12710 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JSQ78_05090 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JSQ78_06030 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JSQ78_08955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JSQ78_06280 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JSQ78_01455 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JSQ78_02200 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JSQ78_05140 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D JSQ78_13355 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D JSQ78_03745 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D JSQ78_03850 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:agro03021]
D JSQ78_06185 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JSQ78_06895 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JSQ78_07320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JSQ78_07315 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JSQ78_02240 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JSQ78_01820 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JSQ78_00660 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JSQ78_03600 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JSQ78_05495 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JSQ78_04685 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JSQ78_02190 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JSQ78_11590 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JSQ78_13355 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D JSQ78_12660 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JSQ78_04975 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:agro03019]
D JSQ78_03425 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D JSQ78_00830 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JSQ78_04500 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JSQ78_01245 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JSQ78_02555 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JSQ78_04845 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSQ78_11005 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSQ78_12610 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSQ78_04545 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JSQ78_04975 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JSQ78_09930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSQ78_06205 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSQ78_06345 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JSQ78_08925 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JSQ78_02440 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D JSQ78_02745 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D JSQ78_05750 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:agro03011]
D JSQ78_02380 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JSQ78_01030 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JSQ78_07075 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JSQ78_02135 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JSQ78_07025 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JSQ78_08920 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JSQ78_07200 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JSQ78_07040 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JSQ78_06860 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JSQ78_07110 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JSQ78_06900 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JSQ78_07205 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JSQ78_06905 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JSQ78_08725 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JSQ78_04550 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JSQ78_00955 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JSQ78_07060 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JSQ78_08910 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JSQ78_07085 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JSQ78_01430 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JSQ78_11600 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JSQ78_07090 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JSQ78_07105 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JSQ78_07100 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JSQ78_07045 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JSQ78_07035 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JSQ78_08905 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JSQ78_11675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JSQ78_11595 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JSQ78_11680 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JSQ78_06865 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JSQ78_07055 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JSQ78_07015 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JSQ78_07070 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JSQ78_06890 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JSQ78_07030 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JSQ78_00980 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JSQ78_04350 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JSQ78_03415 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JSQ78_07080 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JSQ78_07095 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JSQ78_07050 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JSQ78_03410 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JSQ78_08735 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JSQ78_07065 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JSQ78_07020 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JSQ78_02630 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JSQ78_00825 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JSQ78_08730 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JSQ78_08990 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JSQ78_04355 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JSQ78_06910 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JSQ78_12545 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:agro03009]
D JSQ78_00830 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JSQ78_01245 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JSQ78_01490 era; GTPase Era K03595 era; GTPase
D JSQ78_03405 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JSQ78_13355 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D JSQ78_04685 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JSQ78_02190 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JSQ78_11590 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JSQ78_05590 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JSQ78_02265 rRNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JSQ78_00885 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JSQ78_05265 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JSQ78_01465 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JSQ78_08965 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JSQ78_03845 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JSQ78_05620 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JSQ78_04230 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JSQ78_06265 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JSQ78_12460 methyltransferase domain-containing protein K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D JSQ78_04180 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JSQ78_03760 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JSQ78_10250 erm; 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D JSQ78_06815 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JSQ78_05955 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D JSQ78_13120 RimK family alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D JSQ78_00965 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JSQ78_03425 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D JSQ78_02150 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JSQ78_02555 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JSQ78_00650 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JSQ78_04165 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D JSQ78_04405 hflX; GTPase HflX K03665 hflX; GTPase
D JSQ78_04920 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JSQ78_02105 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JSQ78_04670 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JSQ78_03375 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JSQ78_01480 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JSQ78_13245 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D JSQ78_00820 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:agro03016]
D JSQ78_01580 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D JSQ78_13025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSQ78_04695 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JSQ78_03455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JSQ78_01385 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSQ78_05615 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JSQ78_05005 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSQ78_02145 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JSQ78_01555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSQ78_02035 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JSQ78_11125 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JSQ78_06270 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JSQ78_03530 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JSQ78_12605 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JSQ78_04320 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JSQ78_04315 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JSQ78_04280 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSQ78_12030 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JSQ78_01470 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JSQ78_02715 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D JSQ78_06880 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JSQ78_04640 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JSQ78_01100 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSQ78_04920 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JSQ78_04420 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JSQ78_08985 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JSQ78_00175 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JSQ78_01940 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D JSQ78_13420 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D JSQ78_07480 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JSQ78_11245 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JSQ78_04425 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JSQ78_00970 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JSQ78_04345 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JSQ78_01115 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JSQ78_08895 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D JSQ78_06320 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D JSQ78_07550 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JSQ78_06820 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JSQ78_06810 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JSQ78_04545 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:agro03012]
D JSQ78_04675 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JSQ78_04360 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JSQ78_01035 elongation factor Ts K02357 tsf; elongation factor Ts
D JSQ78_07190 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JSQ78_07195 fusA; elongation factor G K02355 fusA; elongation factor G
D JSQ78_04970 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JSQ78_01045 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JSQ78_04585 HemK family protein methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JSQ78_04925 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JSQ78_12550 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JSQ78_06915 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JSQ78_02185 efp; elongation factor P K02356 efp; elongation factor P
D JSQ78_00585 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D JSQ78_13360 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:agro03110]
D JSQ78_10155 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JSQ78_07420 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JSQ78_09720 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JSQ78_03575 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JSQ78_09930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSQ78_06205 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSQ78_01460 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D JSQ78_09940 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D JSQ78_09935 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JSQ78_09995 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D JSQ78_11010 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D JSQ78_06785 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JSQ78_07530 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JSQ78_04905 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JSQ78_09090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JSQ78_02125 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JSQ78_08950 trxA; thioredoxin K03671 TXN; thioredoxin
D JSQ78_01080 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:agro04131]
D JSQ78_03440 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JSQ78_05570 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JSQ78_02455 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_04145 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_06305 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSQ78_02340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSQ78_09915 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:agro03051]
D JSQ78_02725 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
D JSQ78_02730 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:agro03032]
D JSQ78_04740 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JSQ78_00340 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_10365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_08695 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JSQ78_08995 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JSQ78_08900 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JSQ78_01570 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JSQ78_01285 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_08915 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_03755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSQ78_09000 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSQ78_01400 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSQ78_11900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSQ78_02640 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_05290 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_11790 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSQ78_00990 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JSQ78_02365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSQ78_01135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSQ78_01850 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSQ78_09045 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSQ78_01845 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSQ78_09040 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSQ78_11890 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JSQ78_12220 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:agro03036]
D JSQ78_00340 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_10365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_00830 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JSQ78_05830 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D JSQ78_08695 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JSQ78_08995 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JSQ78_00860 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JSQ78_04190 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JSQ78_04185 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D JSQ78_00595 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JSQ78_03835 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JSQ78_04465 DUF87 domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JSQ78_07260 FHA domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JSQ78_03795 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D JSQ78_03810 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JSQ78_00600 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JSQ78_01965 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D JSQ78_03780 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D JSQ78_04195 ParA family protein K03496 parA; chromosome partitioning protein
D JSQ78_08960 ParA family protein K03496 parA; chromosome partitioning protein
D JSQ78_03900 ParA family protein K03496 parA; chromosome partitioning protein
D JSQ78_08955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JSQ78_08965 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JSQ78_01020 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D JSQ78_04205 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D JSQ78_13665 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JSQ78_02445 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:agro03400]
D JSQ78_11200 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JSQ78_11210 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JSQ78_10220 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D JSQ78_05190 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JSQ78_05000 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JSQ78_04660 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JSQ78_06185 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JSQ78_01890 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JSQ78_00890 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JSQ78_03930 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JSQ78_00835 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSQ78_08880 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSQ78_03675 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSQ78_10730 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSQ78_10650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSQ78_12035 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSQ78_01135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSQ78_02365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSQ78_02430 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JSQ78_13340 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JSQ78_02415 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JSQ78_02435 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JSQ78_00035 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_00050 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_06660 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSQ78_07320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JSQ78_07315 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JSQ78_06895 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JSQ78_02240 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JSQ78_12560 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JSQ78_05400 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JSQ78_05415 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JSQ78_03755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSQ78_09000 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSQ78_01400 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSQ78_11900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSQ78_02640 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_05290 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSQ78_11790 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSQ78_01285 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_08915 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_04440 recA; recombinase RecA K03553 recA; recombination protein RecA
D JSQ78_02085 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JSQ78_02070 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JSQ78_02255 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JSQ78_13500 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D JSQ78_13505 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D JSQ78_07395 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JSQ78_09010 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JSQ78_05260 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JSQ78_01525 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JSQ78_11795 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JSQ78_04220 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JSQ78_11730 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D JSQ78_09850 Ku protein K10979 ku; DNA end-binding protein Ku
D JSQ78_09845 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JSQ78_01850 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSQ78_09045 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSQ78_01845 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSQ78_09040 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSQ78_11890 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JSQ78_12220 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JSQ78_08695 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JSQ78_04845 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSQ78_11005 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSQ78_02675 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JSQ78_04400 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JSQ78_06550 DNA polymerase Y family protein K14161 imuB; protein ImuB
D JSQ78_06540 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D JSQ78_04435 RecX family transcriptional regulator K03565 recX; regulatory protein
D JSQ78_10735 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D JSQ78_06350 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D JSQ78_04210 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D JSQ78_09580 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JSQ78_09575 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:agro03029]
D JSQ78_04675 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JSQ78_04360 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JSQ78_01035 elongation factor Ts K02357 tsf; elongation factor Ts
D JSQ78_07190 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JSQ78_07195 fusA; elongation factor G K02355 fusA; elongation factor G
D JSQ78_01490 era; GTPase Era K03595 era; GTPase
D JSQ78_04280 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSQ78_01385 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSQ78_01555 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSQ78_05005 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSQ78_01165 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JSQ78_01170 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JSQ78_01160 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JSQ78_01285 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_08915 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSQ78_09930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSQ78_09935 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JSQ78_06205 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSQ78_06785 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JSQ78_01460 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D JSQ78_09940 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D JSQ78_01100 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSQ78_13665 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JSQ78_02510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JSQ78_02520 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JSQ78_08975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:agro02000]
D JSQ78_12180 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSQ78_12185 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSQ78_06580 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JSQ78_06585 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JSQ78_11690 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JSQ78_05895 ATP-binding cassette domain-containing protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D JSQ78_11960 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D JSQ78_05575 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D JSQ78_05305 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JSQ78_05300 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D JSQ78_05295 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JSQ78_00135 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JSQ78_00140 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D JSQ78_00145 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D JSQ78_00150 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JSQ78_08095 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D JSQ78_08100 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JSQ78_08105 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JSQ78_08110 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D JSQ78_11480 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JSQ78_11485 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D JSQ78_03230 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSQ78_06255 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSQ78_11490 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JSQ78_09260 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D JSQ78_09265 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D JSQ78_09270 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D JSQ78_08500 autoinducer 2 ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D JSQ78_08495 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D JSQ78_08485 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JSQ78_08490 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JSQ78_03235 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JSQ78_03245 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JSQ78_03240 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JSQ78_12095 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JSQ78_12100 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JSQ78_12110 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JSQ78_12115 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JSQ78_12105 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JSQ78_06430 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JSQ78_06440 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JSQ78_09705 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JSQ78_06435 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JSQ78_09700 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JSQ78_06370 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JSQ78_06365 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JSQ78_06360 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JSQ78_06355 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JSQ78_04335 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D JSQ78_04330 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D JSQ78_04325 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D JSQ78_04340 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D JSQ78_01825 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSQ78_01830 ABC transporter permease subunit K10009 tcyB; L-cystine transport system permease protein
D JSQ78_01835 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JSQ78_06775 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JSQ78_06755 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JSQ78_06760 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JSQ78_06765 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JSQ78_06770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JSQ78_05475 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JSQ78_06405 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D JSQ78_10345 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JSQ78_05465 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSQ78_06410 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSQ78_10350 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSQ78_05470 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D JSQ78_06415 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D JSQ78_10355 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D JSQ78_08320 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JSQ78_08325 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JSQ78_08330 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JSQ78_06075 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_11635 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_13585 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSQ78_13565 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D JSQ78_13575 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D JSQ78_03095 TIGR04028 family ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSQ78_11620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSQ78_13555 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSQ78_03100 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSQ78_11625 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSQ78_03105 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSQ78_11630 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSQ78_03110 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSQ78_03565 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D JSQ78_03560 iron ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D JSQ78_03570 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D JSQ78_00915 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D JSQ78_00920 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D JSQ78_00930 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D JSQ78_05210 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JSQ78_00925 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D JSQ78_05215 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D JSQ78_02625 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JSQ78_05220 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JSQ78_00185 zinc ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D JSQ78_00195 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JSQ78_00190 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JSQ78_02565 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JSQ78_01210 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JSQ78_01205 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JSQ78_01200 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D JSQ78_08750 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D JSQ78_08755 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D JSQ78_08760 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D JSQ78_12315 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D JSQ78_12320 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JSQ78_11975 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D JSQ78_11980 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D JSQ78_11970 ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D JSQ78_04470 ABC transporter permease K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D JSQ78_00600 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JSQ78_00595 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JSQ78_06955 ATP-binding cassette domain-containing protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D JSQ78_10255 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSQ78_11560 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSQ78_13625 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSQ78_06950 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSQ78_10240 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSQ78_10260 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSQ78_11565 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSQ78_13630 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSQ78_01510 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSQ78_04475 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSQ78_06005 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSQ78_08650 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSQ78_11100 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSQ78_12790 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSQ78_02540 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JSQ78_10160 sugar porter family MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D JSQ78_09165 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D JSQ78_07970 MHS family MFS transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D JSQ78_12510 MHS family MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D JSQ78_11725 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JSQ78_04155 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D JSQ78_12980 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JSQ78_13480 multidrug efflux MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D JSQ78_09915 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D JSQ78_11710 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D JSQ78_12045 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JSQ78_06940 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D JSQ78_06930 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JSQ78_06935 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JSQ78_12140 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JSQ78_02965 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D JSQ78_02980 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D JSQ78_01975 ammonium transporter K03320 amt; ammonium transporter, Amt family
D JSQ78_05985 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D JSQ78_03695 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D JSQ78_10500 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D JSQ78_10970 CrcB family protein K06199 crcB; fluoride exporter
D JSQ78_10975 CrcB family protein K06199 crcB; fluoride exporter
D JSQ78_00785 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_00790 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_01485 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_13350 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_04605 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JSQ78_10010 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JSQ78_00815 zinc permease K07238 TC.ZIP; zinc transporter, ZIP family
D JSQ78_03180 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D JSQ78_11065 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump
D JSQ78_11070 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D JSQ78_04940 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JSQ78_04945 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JSQ78_03065 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D JSQ78_07670 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D JSQ78_06780 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D JSQ78_06230 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JSQ78_08125 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JSQ78_09035 GntP family transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D JSQ78_12540 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D JSQ78_08035 BCCT family transporter K05020 opuD; glycine betaine transporter
D JSQ78_03080 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D JSQ78_03150 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D JSQ78_11510 cation acetate symporter K14393 actP; cation/acetate symporter
D JSQ78_01970 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D JSQ78_10530 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D JSQ78_11280 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D JSQ78_11275 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JSQ78_09495 cytosine permease K10974 codB; cytosine permease
D JSQ78_13620 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JSQ78_10485 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D JSQ78_10085 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D JSQ78_05570 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JSQ78_10090 arsenic resistance protein K03325 ACR3; arsenite transporter
D JSQ78_13290 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D JSQ78_13510 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D JSQ78_13515 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D JSQ78_13520 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D JSQ78_13525 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D JSQ78_13530 sodium:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D JSQ78_13535 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D JSQ78_08935 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JSQ78_10665 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D JSQ78_13690 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D JSQ78_03430 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D JSQ78_03925 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D JSQ78_03920 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D JSQ78_05700 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JSQ78_05705 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JSQ78_05710 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JSQ78_06635 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D JSQ78_03810 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JSQ78_06115 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JSQ78_10060 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JSQ78_11320 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JSQ78_00750 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JSQ78_02560 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D JSQ78_03580 copper resistance protein CopC K07156 copC; copper resistance protein C
D JSQ78_10015 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:agro02044]
D JSQ78_05035 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSQ78_05480 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSQ78_05055 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D JSQ78_05070 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JSQ78_05060 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JSQ78_05030 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JSQ78_05065 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JSQ78_00245 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSQ78_11865 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSQ78_00250 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JSQ78_00255 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JSQ78_03775 YggT family protein K02221 yggT; YggT family protein
D JSQ78_01390 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D JSQ78_01395 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D JSQ78_05530 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSQ78_02095 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JSQ78_11585 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSQ78_02100 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JSQ78_02470 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSQ78_07010 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSQ78_00910 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JSQ78_00900 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSQ78_08975 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSQ78_02735 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JSQ78_13660 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D JSQ78_02740 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:agro02042]
D JSQ78_00785 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_00790 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_01485 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_13350 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSQ78_05520 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:agro02022]
D JSQ78_02395 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JSQ78_11735 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JSQ78_06295 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JSQ78_06290 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D JSQ78_04100 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JSQ78_04105 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JSQ78_05550 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JSQ78_05555 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D JSQ78_06195 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSQ78_11670 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSQ78_06190 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JSQ78_11665 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JSQ78_12705 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D JSQ78_02350 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:agro02035]
D JSQ78_01825 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSQ78_05065 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JSQ78_05055 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D JSQ78_05070 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JSQ78_05060 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JSQ78_05035 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSQ78_05480 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSQ78_05030 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JSQ78_00245 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSQ78_11865 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:agro04812]
D JSQ78_04195 ParA family protein K03496 parA; chromosome partitioning protein
D JSQ78_08960 ParA family protein K03496 parA; chromosome partitioning protein
D JSQ78_03900 ParA family protein K03496 parA; chromosome partitioning protein
D JSQ78_08955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:agro04147]
D JSQ78_12610 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSQ78_02455 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_04145 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSQ78_02460 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JSQ78_02340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSQ78_09090 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JSQ78_06205 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSQ78_09930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSQ78_02495 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSQ78_06730 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSQ78_06750 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSQ78_07190 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JSQ78_01470 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JSQ78_12200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JSQ78_03885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_12900 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSQ78_03950 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSQ78_12425 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JSQ78_07005 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JSQ78_08450 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JSQ78_04285 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JSQ78_10755 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JSQ78_01085 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JSQ78_02985 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JSQ78_01765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_01780 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSQ78_09355 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JSQ78_01625 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JSQ78_12970 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSQ78_06595 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JSQ78_01800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSQ78_07795 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JSQ78_02490 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSQ78_09195 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSQ78_02465 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSQ78_06305 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:agro02048]
D JSQ78_00340 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_10365 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JSQ78_05680 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JSQ78_05675 CopG family transcriptional regulator K26986 mazE6; antitoxin MazE6
D JSQ78_05885 hypothetical protein K18923 stbD; antitoxin StbD
D JSQ78_13250 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D JSQ78_13255 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1
D JSQ78_03295 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D JSQ78_03290 hypothetical protein K21495 fitA; antitoxin FitA
D JSQ78_13025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSQ78_01100 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:agro01504]
D JSQ78_10250 erm; 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D JSQ78_12980 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JSQ78_05910 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D JSQ78_08390 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JSQ78_11040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSQ78_13140 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JSQ78_12525 glucose 1-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D JSQ78_12530 zinc-binding dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D JSQ78_05645 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JSQ78_05785 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JSQ78_08055 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JSQ78_07890 NAD-dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D JSQ78_07350 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D JSQ78_12640 FAD-binding protein K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D JSQ78_08660 fgd; glucose-6-phosphate dehydrogenase (coenzyme-F420) K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D JSQ78_10595 nitroreductase family deazaflavin-dependent oxidoreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D JSQ78_08020 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D JSQ78_07580 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JSQ78_08340 FAD-binding oxidoreductase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25]
D JSQ78_12160 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D JSQ78_01620 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JSQ78_01280 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JSQ78_06220 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JSQ78_03225 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D JSQ78_12720 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JSQ78_11180 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JSQ78_01695 peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D JSQ78_09225 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D JSQ78_10395 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D JSQ78_08030 LLM class flavin-dependent oxidoreductase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]
D JSQ78_11435 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JSQ78_05120 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JSQ78_10290 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JSQ78_13275 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JSQ78_13280 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JSQ78_06340 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D JSQ78_02750 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JSQ78_10100 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JSQ78_07900 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D JSQ78_05165 glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D JSQ78_02325 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JSQ78_08160 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D JSQ78_01770 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D JSQ78_02030 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D JSQ78_01305 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JSQ78_00005 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JSQ78_05600 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JSQ78_09370 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D JSQ78_01595 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JSQ78_03890 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JSQ78_13600 PIG-L family deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D JSQ78_12670 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D JSQ78_00100 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D JSQ78_08015 alpha/beta fold hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-]
D JSQ78_04725 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSQ78_04795 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSQ78_05245 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSQ78_07300 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSQ78_08155 class II aldolase/adducin family protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D JSQ78_03085 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K26364 K26364; mimosinase [EC:4.3.3.8]
D JSQ78_08475 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D JSQ78_08510 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D JSQ78_11185 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D JSQ78_07895 alpha/beta fold hydrolase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D JSQ78_02700 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D JSQ78_04825 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D JSQ78_06035 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D JSQ78_07460 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D JSQ78_10905 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JSQ78_06385 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D JSQ78_10040 cadA; cadmium-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D JSQ78_06695 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JSQ78_07800 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D JSQ78_09585 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D JSQ78_03060 EI24 domain-containing protein K06203 cysZ; CysZ protein
D JSQ78_03785 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D JSQ78_10815 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D JSQ78_12380 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ
D JSQ78_09790 transglycosylase family protein K21687 rpfA; resuscitation-promoting factor RpfA
D JSQ78_12350 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D JSQ78_05870 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D JSQ78_07370 phospholipase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JSQ78_06170 cold shock domain-containing protein K03704 cspA; cold shock protein
D JSQ78_11150 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D JSQ78_03595 trigger factor K03545 tig; trigger factor
D JSQ78_00605 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JSQ78_09590 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D JSQ78_01005 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D JSQ78_06120 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D JSQ78_10065 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D JSQ78_11325 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D JSQ78_09485 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D JSQ78_01000 YraN family protein K07460 yraN; putative endonuclease
D JSQ78_09410 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JSQ78_01010 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D JSQ78_02130 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D JSQ78_04050 transposase K07483 K07483; transposase
D JSQ78_12820 hypothetical protein K07483 K07483; transposase
D JSQ78_01985 IS256 family transposase K07493 K07493; putative transposase
D JSQ78_12210 IS256 family transposase K07493 K07493; putative transposase
D JSQ78_03270 IS3 family transposase K07497 K07497; putative transposase
D JSQ78_04065 IS3 family transposase K07497 K07497; putative transposase
D JSQ78_04110 IS3 family transposase K07497 K07497; putative transposase
D JSQ78_06135 IS3 family transposase K07497 K07497; putative transposase
D JSQ78_08270 IS3 family transposase K07497 K07497; putative transposase
D JSQ78_13265 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JSQ78_05160 PspA/IM30 family protein K03969 pspA; phage shock protein A
D JSQ78_07910 type I restriction enzyme HsdR N-terminal domain-containing protein K07504 K07504; predicted type IV restriction endonuclease
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JSQ78_12475 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JSQ78_10985 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D JSQ78_09235 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JSQ78_04690 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JSQ78_06690 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D JSQ78_01420 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D JSQ78_08970 DNA-binding protein K06346 jag; spoIIIJ-associated protein
D JSQ78_06975 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
C 99993 Cell motility
C 99995 Signaling proteins
D JSQ78_05560 carbon starvation protein A K06200 cstA; carbon starvation protein
D JSQ78_13590 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D JSQ78_01475 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D JSQ78_05510 PhoH family protein K07175 phoH2; PhoH-like ATPase
D JSQ78_11450 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D JSQ78_12355 DUF2304 domain-containing protein K09153 K09153; small membrane protein
C 99994 Others
D JSQ78_06300 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JSQ78_03700 globin K06886 glbN; hemoglobin
D JSQ78_04000 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JSQ78_11950 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JSQ78_12890 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JSQ78_02525 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JSQ78_02530 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D JSQ78_12040 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JSQ78_13060 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JSQ78_01955 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D JSQ78_03955 VOC family protein K04750 phnB; PhnB protein
D JSQ78_11195 histidine phosphatase family protein K15640 K15640; uncharacterized phosphatase
D JSQ78_10070 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein
D JSQ78_10885 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein
D JSQ78_00205 DedA family protein K03975 dedA; membrane-associated protein
D JSQ78_01355 DedA family protein K03975 dedA; membrane-associated protein
D JSQ78_10780 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D JSQ78_12895 hypothetical protein K01421 yhgE; putative membrane protein
D JSQ78_08795 phage holin family protein K08972 K08972; putative membrane protein
D JSQ78_07495 PH domain-containing protein K08981 K08981; putative membrane protein
D JSQ78_13050 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D JSQ78_11270 SEC-C domain-containing protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D JSQ78_13135 sulfite exporter TauE/SafE family protein K06867 K06867; uncharacterized protein
D JSQ78_13150 sulfite exporter TauE/SafE family protein K06867 K06867; uncharacterized protein
D JSQ78_05630 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D JSQ78_01950 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D JSQ78_00960 RNA-binding protein K06960 K06960; uncharacterized protein
D JSQ78_08130 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein
D JSQ78_02960 N-acetyltransferase K06975 K06975; uncharacterized protein
D JSQ78_03515 N-acetyltransferase K06975 K06975; uncharacterized protein
D JSQ78_07690 N-acetyltransferase K06975 K06975; uncharacterized protein
D JSQ78_13130 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D JSQ78_08555 VOC family protein K06996 K06996; uncharacterized protein
D JSQ78_06535 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D JSQ78_07600 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D JSQ78_05640 dienelactone hydrolase K07020 K07020; uncharacterized protein
D JSQ78_13475 glyoxalase K07032 K07032; uncharacterized protein
D JSQ78_09690 amidohydrolase family protein K07045 K07045; uncharacterized protein
D JSQ78_10865 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D JSQ78_00880 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D JSQ78_02835 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D JSQ78_07955 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D JSQ78_11935 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D JSQ78_10770 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D JSQ78_05795 helix-turn-helix domain-containing protein K07075 K07075; uncharacterized protein
D JSQ78_03705 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D JSQ78_11440 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JSQ78_02875 metallophosphoesterase K07095 K07095; uncharacterized protein
D JSQ78_11835 metallophosphoesterase K07098 K07098; uncharacterized protein
D JSQ78_10630 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D JSQ78_00215 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D JSQ78_01720 hypothetical protein K07164 K07164; uncharacterized protein
D JSQ78_08980 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JSQ78_12620 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D JSQ78_00070 UPF0182 family protein K09118 K09118; uncharacterized protein
D JSQ78_01655 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D JSQ78_07500 PH domain-containing protein K09167 K09167; uncharacterized protein
D JSQ78_09505 DUF917 domain-containing protein K09703 K09703; uncharacterized protein
D JSQ78_09510 DUF917 domain-containing protein K09703 K09703; uncharacterized protein
D JSQ78_09515 DUF917 domain-containing protein K09703 K09703; uncharacterized protein
D JSQ78_08875 hypothetical protein K09780 K09780; uncharacterized protein
D JSQ78_04310 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D JSQ78_04865 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D JSQ78_02800 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein
D JSQ78_12645 YcaQ family DNA glycosylase K09927 K09927; uncharacterized protein
D JSQ78_04680 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024